RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 RILPQ96NA2 401 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CARD6Q9BX69 1037 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 METTL14Q9HCE5 456 aaKnown RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 DBNLQ9UJU6 430 aaKnown RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 PALM3A6NDB9 673 aaPredicted RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 UBTFL1P0CB47 393 aaPredicted RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 AFMP43652 599 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CCT2P78371 535 aaKnown RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 APOBRQ0VD83 1088 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 TSC22D1Q15714 1073 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CWF19L2Q2TBE0 894 aaKnown RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 FSCBQ5H9T9 825 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 AKNAD1Q5T1N1 836 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 NXNQ6DKJ4 435 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 TEX2Q8IWB9 1127 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 PROCA1Q8NCQ7 364 aaPredicted RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 BMP2KQ9NSY1 1161 aaPredicted RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 ARHGEF9O43307 516 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 WDHD1O75717 1129 aaPredicted RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 TRIM21P19474 475 aaKnown RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 MCM5P33992 734 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 GABPB1Q06547 395 aaPredicted RBP3.68□□□□□ -1.82
PHF3-202ENST00000393387 ADCY1Q08828 1119 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 LRSAM1Q6UWE0 723 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 EP400NLQ6ZTU2 488 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 TLK2Q86UE8 772 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 CCDC77Q9BR77 488 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 SYNCQ9H7C4 482 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 JRKLQ9Y4A0 524 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 KIF15Q9NS87 1388 aa3.68□□□□□ -1.82
PHF3-202ENST00000393387 AKR1B10O60218 316 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 NEMFO60524 1076 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 DKC1O60832 514 aaKnown RBP eCLIP3.67□□□□□ -1.82
PHF3-202ENST00000393387 TSC22D2O75157 780 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 POLR3DP05423 398 aaPredicted RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 RASSF2P50749 326 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 GUCY2FP51841 1108 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 C1orf141Q5JVX7 400 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 PRPF40BQ6NWY9 871 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 RIC3Q7Z5B4 369 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 HEATR4Q86WZ0 1026 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 MAP7D3Q8IWC1 876 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 ENAHQ8N8S7 591 aaPredicted RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 SH3GL1Q99961 368 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 UTP14AQ9BVJ6 771 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 TBC1D2Q9BYX2 928 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 TEKT2Q9UIF3 430 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 NOB1Q9ULX3 412 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 WDR91A4D1P6 747 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 WDR46O15213 610 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 DDHD2O94830 711 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 ACTN2P35609 894 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 PRIM1P49642 420 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 ZNF165P49910 485 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 CDR2Q01850 454 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 DDX42Q86XP3 938 aaKnown RBP eCLIP3.67□□□□□ -1.82
PHF3-202ENST00000393387 UHMK1Q8TAS1 419 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 HVCN1Q96D96 273 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 OMA1Q96E52 524 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 TSGA10Q9BZW7 698 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 VCX3AQ9NNX9 186 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 UTP6Q9NYH9 597 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 BCAP29Q9UHQ4 241 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 BZW2Q9Y6E2 419 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 PARP3Q9Y6F1 533 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 EEF1B2P24534 225 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 GJB2P29033 226 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 ALDH3A1P30838 453 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 GABPAQ06546 454 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 ACTN3Q08043 901 aaPredicted RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 TRPC3Q13507 836 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 ERCC6LQ2NKX8 1250 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 NFRKBQ6P4R8 1299 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 CAPN12Q6ZSI9 719 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 KLHL7Q8IXQ5 586 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 KCTD17Q8N5Z5 321 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 TCP11Q8WWU5 503 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 RPGRQ92834 1020 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 SIRT1Q96EB6 747 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 RAB3IPQ96QF0 476 aaPredicted RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.67□□□□□ -1.82
PHF3-202ENST00000393387 SPC25Q9HBM1 224 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 SYTL2Q9HCH5 934 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 N4BP3O15049 544 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 MAN1A1P33908 653 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 TBC1D10BQ4KMP7 808 aaPredicted RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 RRAGBQ5VZM2 374 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 TTC5Q8N0Z6 440 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 OGFOD1Q8N543 542 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 CYTH2Q99418 400 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 KRT82Q9NSB4 513 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 CFDP1Q9UEE9 299 aaPredicted RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 TPP2P29144 1249 aaPredicted RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 SLC8A1P32418 973 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 TRAPPC10P48553 1259 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 NEK2P51955 445 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 NLRP5P59047 1200 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 PTPROQ16827 1216 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 TRIM60Q495X7 471 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 HHATQ5VTY9 493 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms