RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 MYBL2P10244 700 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 UBASH3AP57075 661 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 ZC3H6P61129 1189 aaKnown RBP8.67□□□□□ -1.02
VTI1A-201ENST00000393077 CASP8Q14790 479 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 LRRC31Q6UY01 552 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 EIF2AK4Q9P2K8 1649 aaKnown RBP8.67□□□□□ -1.02
VTI1A-201ENST00000393077 HSF2BPO75031 334 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 NYAP1Q6ZVC0 841 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 CCDC26Q8TAB7 109 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 BATF3Q9NR55 127 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 TPX2Q9ULW0 747 aaKnown RBP8.67□□□□□ -1.02
VTI1A-201ENST00000393077 ZFYVE16Q7Z3T8 1539 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 ZNF521Q96K83 1311 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 GOLGA6BA6NDN3 693 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 BIN1O00499 593 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 MCM10Q7L590 875 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 TRIM74Q86UV6 250 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 TRIM73Q86UV7 250 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 SPDYE1Q8NFV5 336 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-201ENST00000393077 BAG1Q99933 345 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-201ENST00000393077 CLSTN2Q9H4D0 955 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 LZTFL1Q9NQ48 299 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 YTHDC2Q9H6S0 1430 aaKnown RBP8.66□□□□□ -1.02
VTI1A-201ENST00000393077 CDC42BPBQ9Y5S2 1711 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 LMOD1P29536 600 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-201ENST00000393077 NFE2L2Q16236 605 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 FILIP1LQ4L180 1135 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 PLEKHM2Q8IWE5 1019 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 LMNTD2Q8IXW0 634 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 RAPGEF4Q8WZA2 1011 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 ZNF396Q96N95 335 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-201ENST00000393077 SH2B1Q9NRF2 756 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-201ENST00000393077 MLH3Q9UHC1 1453 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 A0A1W2PP64 1363 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 LRRD1A4D1F6 860 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 MYO1FO00160 1098 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 EVA1CP58658 441 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 LAMB3Q13751 1172 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 GDAP1L1Q96MZ0 367 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 OSBPL9Q96SU4 736 aa8.66□□□□□ -1.02
VTI1A-201ENST00000393077 CCDC189A1A4V9 331 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 ZRANB2O95218 330 aaKnown RBP eCLIP8.65□□□□□ -1.02
VTI1A-201ENST00000393077 CCDC175P0C221 793 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 PCK1P35558 622 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 IFT88Q13099 833 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 DZIP1Q86YF9 867 aaKnown RBP8.65□□□□□ -1.02
VTI1A-201ENST00000393077 JAKMIP1Q96N16 626 aaKnown RBP8.65□□□□□ -1.02
VTI1A-201ENST00000393077 PHF8Q9UPP1 1060 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 PFDN1O60925 122 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 IFFO1Q0D2I5 559 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 PPFIA1Q13136 1202 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 HSP90AB2PQ58FF8 381 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 PLA2G4DQ86XP0 818 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 CCAR1Q8IX12 1150 aaKnown RBP8.65□□□□□ -1.02
VTI1A-201ENST00000393077 L2HGDHQ9H9P8 463 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 ABCB6Q9NP58 842 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 SGSM2O43147 1006 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 KCNA6P17658 529 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 GPTP24298 496 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 STK3Q13188 491 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 STK38Q15208 465 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 ZNF569Q5MCW4 686 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 ARMC3Q5W041 872 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 C16orf71Q8IYS4 520 aaPredicted RBP8.65□□□□□ -1.02
VTI1A-201ENST00000393077 SPAG5Q96R06 1193 aa8.65□□□□□ -1.02
VTI1A-201ENST00000393077 PRDM15P57071 1507 aaPredicted RBP8.65□□□□□ -1.03
VTI1A-201ENST00000393077 FAM83GA6ND36 823 aa8.65□□□□□ -1.03
VTI1A-201ENST00000393077 EXOC5O00471 708 aa8.65□□□□□ -1.03
VTI1A-201ENST00000393077 CREB3O43889 395 aa8.65□□□□□ -1.03
VTI1A-201ENST00000393077 ZNF428Q96B54 188 aa8.65□□□□□ -1.03
VTI1A-201ENST00000393077 FUT8Q9BYC5 575 aa8.65□□□□□ -1.03
VTI1A-201ENST00000393077 CPP00450 1065 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 LTKP29376 864 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 SEPT14Q6ZU15 432 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 TAX1BP1Q86VP1 789 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 MYLK4Q86YV6 388 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-201ENST00000393077 REXO1L1PQ8IX06 675 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 FSIP1Q8NA03 581 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 CCDC47Q96A33 483 aaKnown RBP8.64□□□□□ -1.03
VTI1A-201ENST00000393077 IQCGQ9H095 443 aaKnown RBP8.64□□□□□ -1.03
VTI1A-201ENST00000393077 PTPRTO14522 1441 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 H3BQF6 201 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 ARHGAP6O43182 974 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 LUC7L3O95232 432 aaKnown RBP8.64□□□□□ -1.03
VTI1A-201ENST00000393077 PSMA5P28066 241 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 TPP2P29144 1249 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-201ENST00000393077 SF3B2Q13435 895 aaKnown RBP8.64□□□□□ -1.03
VTI1A-201ENST00000393077 SYNE3Q6ZMZ3 975 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 SRGAP1Q7Z6B7 1085 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 B4GALNT2Q8NHY0 566 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 MAP4K4O95819 1239 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-201ENST00000393077 CCNHP51946 323 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-201ENST00000393077 FAM160A1Q05DH4 1040 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 PPP1R7Q15435 360 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 FAM173BQ6P4H8 233 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 XPO4Q9C0E2 1151 aaKnown RBP8.64□□□□□ -1.03
VTI1A-201ENST00000393077 AKAP2Q9Y2D5 859 aa8.64□□□□□ -1.03
VTI1A-201ENST00000393077 PPIP5K1Q6PFW1 1433 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 AP5Z1O43299 807 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms