RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ZC3H7BQ9UGR2 993 aaKnown RBP3.97□□□□□ -1.77
RNU6-239P-201ENST00000390990 FAM177BA6PVY3 158 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 TNFRSF10BO14763 440 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 TRPA1O75762 1119 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 ZNF865P0CJ78 1059 aaPredicted RBP3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 BRD2P25440 801 aaKnown RBP3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 TMEM132AQ24JP5 1023 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 ZNF574Q6ZN55 896 aaPredicted RBP3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 WFDC3Q8IUB2 231 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 SMG8Q8ND04 991 aaKnown RBP3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 GLMNQ92990 594 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 TBC1D32Q96NH3 1257 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 HHIPQ96QV1 700 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 PPP1R12CQ9BZL4 782 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 VRTNQ9H8Y1 702 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 SUGCTQ9HAC7 445 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 ABI2Q9NYB9 513 aaPredicted RBP3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 PRKAG2Q9UGJ0 569 aa3.96□□□□□ -1.78
RNU6-239P-201ENST00000390990 ZBTB39O15060 712 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 FARP2O94887 1054 aaPredicted RBP3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 UBTFP17480 764 aaKnown RBP3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 ZAP70P43403 619 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 USP11P51784 963 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 C19orf57Q0VDD7 668 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 ZNF792Q3KQV3 632 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 CAPN12Q6ZSI9 719 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 SPRED2Q7Z698 418 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 C2CD4AQ8NCU7 369 aaPredicted RBP3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 GPR152Q8TDT2 470 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 PRIMPOLQ96LW4 560 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 LRRC4CQ9HCJ2 640 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 CNTN3Q9P232 1028 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 KANSL3Q9P2N6 904 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 SOX13Q9UN79 622 aa3.95□□□□□ -1.78
RNU6-239P-201ENST00000390990 LOC100289279A0A1B0GTE1 492 aa3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 SOX1O00570 391 aaPredicted RBP3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 C16orf46Q6P387 395 aa3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 BCL7CQ8WUZ0 217 aaPredicted RBP3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 EZH1Q92800 747 aaPredicted RBP3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 USP26Q9BXU7 913 aa3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 CYP4F12Q9HCS2 524 aa3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 DZANK1Q9NVP4 752 aa3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 TMEM63CQ9P1W3 806 aa3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 SALL4Q9UJQ4 1053 aa3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 FNDC3AQ9Y2H6 1198 aaKnown RBP3.94□□□□□ -1.78
RNU6-239P-201ENST00000390990 PDE2AO00408 941 aaPredicted RBP3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 BIN1O00499 593 aa3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 LMOD1P29536 600 aaPredicted RBP3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 ARL4DP49703 201 aa3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 PLCL1Q15111 1095 aa3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 ZNF765Q7L2R6 523 aa3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 CILP2Q8IUL8 1156 aa3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 FAM200AQ8TCP9 573 aa3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 ELP3Q9H9T3 547 aa3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 FAM13BQ9NYF5 915 aa3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 SLC5A6Q9Y289 635 aa3.93□□□□□ -1.78
RNU6-239P-201ENST00000390990 PRMT3O60678 531 aa3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 SOX4Q06945 474 aaPredicted RBP3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 BNIP3Q12983 259 aa3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 PKN1Q16512 942 aa3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 OCLNQ16625 522 aa3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 EXOSC6Q5RKV6 272 aaKnown RBP3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 DUSP27Q5VZP5 1158 aa3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 VN1R5Q7Z5H4 357 aa3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 ATG4DQ86TL0 474 aaPredicted RBP3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 KSR1Q8IVT5 923 aa3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 GLIS3Q8NEA6 775 aa3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 FAM168AQ92567 244 aa3.92□□□□□ -1.78
RNU6-239P-201ENST00000390990 NFICP08651 508 aa3.91□□□□□ -1.78
RNU6-239P-201ENST00000390990 MESP2Q0VG99 397 aa3.91□□□□□ -1.78
RNU6-239P-201ENST00000390990 IKBKEQ14164 716 aa3.91□□□□□ -1.78
RNU6-239P-201ENST00000390990 NAA30Q147X3 362 aaPredicted RBP3.91□□□□□ -1.78
RNU6-239P-201ENST00000390990 FNBP4Q8N3X1 1017 aaPredicted RBP3.91□□□□□ -1.78
RNU6-239P-201ENST00000390990 C1orf127Q8N9H9 656 aa3.91□□□□□ -1.78
RNU6-239P-201ENST00000390990 RNASE1P07998 156 aaKnown RBP3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 KRTAP19-4Q3LI73 84 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 CDCA8Q53HL2 280 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 PDE12Q6L8Q7 609 aaKnown RBP3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 ZNF438Q7Z4V0 828 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 TMEM40Q8WWA1 233 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 BSNDQ8WZ55 320 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 NXPE3Q969Y0 559 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 MKNK1Q9BUB5 465 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 KRTAP9-3Q9BYQ3 159 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 MBNL3Q9NUK0 354 aaKnown RBP3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 ADAMTS6Q9UKP5 1117 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 ACTL7BQ9Y614 415 aa3.9□□□□□ -1.79
RNU6-239P-201ENST00000390990 PRRG2O14669 202 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 DYNC1LI2O43237 492 aaPredicted RBP3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 ADH5P11766 374 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 RAB6AP20340 208 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 CES1P23141 567 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 CYP27A1Q02318 531 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 FLIIQ13045 1269 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 LILRA6Q6PI73 481 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 TMEM102Q8N9M5 508 aaPredicted RBP3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 NUDT16Q96DE0 195 aaKnown RBP3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 SLC38A3Q99624 504 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 YIPF2Q9BWQ6 316 aa3.89□□□□□ -1.79
RNU6-239P-201ENST00000390990 SEMA6CQ9H3T2 930 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms