RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TPTE2Q6XPS3 522 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 AGMOQ6ZNB7 445 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 RAB44Q7Z6P3 723 aaPredicted RBP4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 NOP9Q86U38 636 aaKnown RBP4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 FAM35AQ86V20 835 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 PHC3Q8NDX5 983 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 EMILIN2Q9BXX0 1053 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 ADAM19Q9H013 955 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 ZNF576Q9H609 170 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 STRIP2Q9ULQ0 834 aa4.48□□□□□ -1.69
TRAJ40-201ENST00000390497 C2CD2LO14523 706 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 GREM1O60565 184 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 STK10O94804 968 aaKnown RBP4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 SNRPBP14678 240 aaKnown RBP4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 PCBP4P57723 403 aaKnown RBP4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 CABP4P57796 275 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 HNRNPUQ00839 825 aaKnown RBP eCLIP4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 CAMK2GQ13555 558 aaPredicted RBP4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 SPRED3Q2MJR0 410 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 NBPF6Q5VWK0 638 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 HFE2Q6ZVN8 426 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 DPH6Q7L8W6 267 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 PLD4Q96BZ4 506 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 NBPF4Q96M43 638 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 MUC3BQ9H195 1237 aa4.47□□□□□ -1.69
TRAJ40-201ENST00000390497 ELOA3CA0A087WX78 387 aaPredicted RBP4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 ELOA3DA6NLF2 546 aaPredicted RBP4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 ENC1O14682 589 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 TRPA1O75762 1119 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 B3GALT4O96024 378 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 PF4P02776 101 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 SSBP05455 408 aaKnown RBP eCLIP4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 CPB1P15086 417 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 ACPPP15309 386 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 NME2P22392 152 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 ARNTP27540 789 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 MLLT1Q03111 559 aaPredicted RBP4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 TBC1D8BQ0IIM8 1120 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 ELOA3BQ3SY89 546 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 FBXL19Q6PCT2 694 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 MCF2L2Q86YR7 1114 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 TRIM42Q8IWZ5 723 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 GOLGA6L1Q8N7Z2 621 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 ELOA3Q8NG57 546 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 DHX38Q92620 1227 aaKnown RBP4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 EAF1Q96JC9 268 aaPredicted RBP4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 RHOVQ96L33 236 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 MIR1-1HGQ9H1L0 117 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 MBIPQ9NS73 344 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 NXF1Q9UBU9 619 aaKnown RBP4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 ADAMTS1Q9UHI8 967 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 GPN3Q9UHW5 284 aaPredicted RBP4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 GDF2Q9UK05 429 aaPredicted RBP4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 SLC6A14Q9UN76 642 aa4.46□□□□□ -1.7
TRAJ40-201ENST00000390497 METTL12A8MUP2 240 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 GPR25O00155 361 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 RGS9O75916 674 aaPredicted RBP4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 HMGB1P09429 215 aaKnown RBP4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 FGRP09769 529 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 CDC27P30260 824 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 ADH7P40394 386 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 SOX9P48436 509 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 ARL4DP49703 201 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 ATP11AP98196 1134 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 PCDH1Q08174 1060 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 NFX1Q12986 1120 aaKnown RBP4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 MAP3K11Q16584 847 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 SNAP47Q5SQN1 464 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 PERM1Q5SV97 790 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 FAM196AQ6ZSG2 479 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 VN1R5Q7Z5H4 357 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 CKAP2LQ8IYA6 745 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 GOLM1Q8NBJ4 401 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 CPLX3Q8WVH0 158 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 WNT8BQ93098 351 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 NKD1Q969G9 470 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 HHIPQ96QV1 700 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 SMG9Q9H0W8 520 aaKnown RBP4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 SOX17Q9H6I2 414 aaPredicted RBP4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 SOX13Q9UN79 622 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 TLR6Q9Y2C9 796 aa4.45□□□□□ -1.7
TRAJ40-201ENST00000390497 CADPSQ9ULU8 1353 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 FBXO24O75426 580 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 BMP6P22004 513 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 ZNF165P49910 485 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 APOBRQ0VD83 1088 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 FAAP100Q0VG06 881 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 AP3B2Q13367 1082 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 IKBKEQ14164 716 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 ZNF423Q2M1K9 1284 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 CWF19L2Q2TBE0 894 aaKnown RBP4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 PCNX4Q63HM2 1172 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 KANK3Q6NY19 840 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 FAM117BQ6P1L5 589 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 Q6ZNB5 142 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 SLITRK4Q8IW52 837 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 REXO1Q8N1G1 1221 aaKnown RBP4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 GATAD2BQ8WXI9 593 aa4.44□□□□□ -1.7
TRAJ40-201ENST00000390497 DNAJC2Q99543 621 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms