RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SLC10A4Q96EP9 437 aa20.35■□□□□ 0.85
VCX3A-201ENST00000381089 CHMP3Q9Y3E7 222 aa20.35■□□□□ 0.85
VCX3A-201ENST00000381089 SUPT20HL1Q3ZLR7 823 aa20.34■□□□□ 0.85
VCX3A-201ENST00000381089 C15orf52Q6ZUT6 534 aaKnown RBP20.34■□□□□ 0.85
VCX3A-201ENST00000381089 UNCXA6NJT0 531 aa20.33■□□□□ 0.85
VCX3A-201ENST00000381089 ZBTB48P10074 688 aaPredicted RBP20.33■□□□□ 0.85
VCX3A-201ENST00000381089 TAF7LQ5H9L4 462 aa20.33■□□□□ 0.85
VCX3A-201ENST00000381089 FANCIQ9NVI1 1328 aa20.32■□□□□ 0.84
VCX3A-201ENST00000381089 TAF5LO75529 589 aa20.32■□□□□ 0.84
VCX3A-201ENST00000381089 FKBP1AP62942 108 aaKnown RBP20.32■□□□□ 0.84
VCX3A-201ENST00000381089 MAP3K11Q16584 847 aa20.32■□□□□ 0.84
VCX3A-201ENST00000381089 F8W031 263 aaPredicted RBP20.31■□□□□ 0.84
VCX3A-201ENST00000381089 IL1R1P14778 569 aa20.31■□□□□ 0.84
VCX3A-201ENST00000381089 CCDC57Q2TAC2 916 aa20.31■□□□□ 0.84
VCX3A-201ENST00000381089 CFAP100Q494V2 611 aa20.31■□□□□ 0.84
VCX3A-201ENST00000381089 HELBQ8NG08 1087 aaPredicted RBP20.31■□□□□ 0.84
VCX3A-201ENST00000381089 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.31■□□□□ 0.84
VCX3A-201ENST00000381089 ECM29Q5VYK3 1845 aa20.3■□□□□ 0.84
VCX3A-201ENST00000381089 SPDYE2BA6NHP3 402 aa20.3■□□□□ 0.84
VCX3A-201ENST00000381089 SPDYE6P0CI01 402 aa20.3■□□□□ 0.84
VCX3A-201ENST00000381089 IREB2P48200 963 aaKnown RBP20.3■□□□□ 0.84
VCX3A-201ENST00000381089 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
VCX3A-201ENST00000381089 OTUD7BQ6GQQ9 843 aa20.3■□□□□ 0.84
VCX3A-201ENST00000381089 IFNL1Q8IU54 200 aa20.3■□□□□ 0.84
VCX3A-201ENST00000381089 CERS5Q8N5B7 392 aa20.3■□□□□ 0.84
VCX3A-201ENST00000381089 VEZTQ9HBM0 779 aa20.3■□□□□ 0.84
VCX3A-201ENST00000381089 FOXO4P98177 505 aa20.29■□□□□ 0.84
VCX3A-201ENST00000381089 WNK4Q96J92 1243 aa20.29■□□□□ 0.84
VCX3A-201ENST00000381089 CNNM1Q9NRU3 951 aa20.29■□□□□ 0.84
VCX3A-201ENST00000381089 IRS2Q9Y4H2 1338 aa20.28■□□□□ 0.84
VCX3A-201ENST00000381089 CLRN2A0PK11 232 aa20.28■□□□□ 0.84
VCX3A-201ENST00000381089 SNAP23O00161 211 aa20.28■□□□□ 0.84
VCX3A-201ENST00000381089 VAMP4O75379 141 aa20.28■□□□□ 0.84
VCX3A-201ENST00000381089 TNFAIP1Q13829 316 aa20.28■□□□□ 0.84
VCX3A-201ENST00000381089 LDHAL6AQ6ZMR3 332 aa20.28■□□□□ 0.84
VCX3A-201ENST00000381089 WDR63Q8IWG1 891 aa20.28■□□□□ 0.84
VCX3A-201ENST00000381089 FZD1Q9UP38 647 aa20.28■□□□□ 0.84
VCX3A-201ENST00000381089 PLIN1O60240 522 aa20.27■□□□□ 0.84
VCX3A-201ENST00000381089 BEND3Q5T5X7 828 aa20.27■□□□□ 0.84
VCX3A-201ENST00000381089 LMBR1LQ6UX01 489 aa20.27■□□□□ 0.84
VCX3A-201ENST00000381089 R3HDMLQ9H3Y0 253 aa20.27■□□□□ 0.84
VCX3A-201ENST00000381089 TRIM17Q9Y577 477 aa20.27■□□□□ 0.84
VCX3A-201ENST00000381089 GRM8O00222 908 aa20.26■□□□□ 0.83
VCX3A-201ENST00000381089 EXOSC9Q06265 439 aaKnown RBP20.26■□□□□ 0.83
VCX3A-201ENST00000381089 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
VCX3A-201ENST00000381089 INTS3Q68E01 1043 aaKnown RBP20.26■□□□□ 0.83
VCX3A-201ENST00000381089 ANKRD13AQ8IZ07 590 aa20.26■□□□□ 0.83
VCX3A-201ENST00000381089 ERO1AQ96HE7 468 aa20.26■□□□□ 0.83
VCX3A-201ENST00000381089 CLMNQ96JQ2 1002 aa20.26■□□□□ 0.83
VCX3A-201ENST00000381089 PRMT6Q96LA8 375 aaPredicted RBP20.26■□□□□ 0.83
VCX3A-201ENST00000381089 C9orf78Q9NZ63 289 aaPredicted RBP20.26■□□□□ 0.83
VCX3A-201ENST00000381089 A0A1B0GUL6 1792 aa20.26■□□□□ 0.83
VCX3A-201ENST00000381089 F6X3S4 739 aa20.25■□□□□ 0.83
VCX3A-201ENST00000381089 MRS2Q9HD23 443 aa20.25■□□□□ 0.83
VCX3A-201ENST00000381089 JAG2Q9Y219 1238 aa20.25■□□□□ 0.83
VCX3A-201ENST00000381089 SSC5DA1L4H1 1573 aa20.25■□□□□ 0.83
VCX3A-201ENST00000381089 RASA3Q14644 834 aa20.24■□□□□ 0.83
VCX3A-201ENST00000381089 NBPF12Q5TAG4 269 aaPredicted RBP20.24■□□□□ 0.83
VCX3A-201ENST00000381089 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
VCX3A-201ENST00000381089 PCDHAC2Q9Y5I4 1007 aa20.24■□□□□ 0.83
VCX3A-201ENST00000381089 IGF2BP3O00425 579 aaKnown RBP eCLIP20.23■□□□□ 0.83
VCX3A-201ENST00000381089 UBE4AQ14139 1066 aa20.23■□□□□ 0.83
VCX3A-201ENST00000381089 MFSD14BQ5SR56 506 aa20.23■□□□□ 0.83
VCX3A-201ENST00000381089 OTOP1Q7RTM1 612 aa20.23■□□□□ 0.83
VCX3A-201ENST00000381089 ZNF594Q96JF6 807 aaPredicted RBP20.23■□□□□ 0.83
VCX3A-201ENST00000381089 SERPINA10Q9UK55 444 aa20.23■□□□□ 0.83
VCX3A-201ENST00000381089 FAM205AQ6ZU69 1335 aa20.23■□□□□ 0.83
VCX3A-201ENST00000381089 LAMB1P07942 1786 aa20.22■□□□□ 0.83
VCX3A-201ENST00000381089 USP2O75604 605 aaPredicted RBP20.22■□□□□ 0.83
VCX3A-201ENST00000381089 GCC1Q96CN9 775 aa20.22■□□□□ 0.83
VCX3A-201ENST00000381089 TTF2Q9UNY4 1162 aaKnown RBP20.22■□□□□ 0.83
VCX3A-201ENST00000381089 ALDH1L1O75891 902 aa20.21■□□□□ 0.83
VCX3A-201ENST00000381089 HIBADHP31937 336 aaKnown RBP20.21■□□□□ 0.83
VCX3A-201ENST00000381089 TNNI2P48788 182 aa20.21■□□□□ 0.83
VCX3A-201ENST00000381089 SPDYE2Q495Y8 402 aa20.21■□□□□ 0.83
VCX3A-201ENST00000381089 CRHR2Q13324 411 aa20.2■□□□□ 0.82
VCX3A-201ENST00000381089 ARHGEF6Q15052 776 aa20.2■□□□□ 0.82
VCX3A-201ENST00000381089 EPHA10Q5JZY3 1008 aa20.2■□□□□ 0.82
VCX3A-201ENST00000381089 SLC4A10Q6U841 1118 aa20.2■□□□□ 0.82
VCX3A-201ENST00000381089 VPS37DQ86XT2 251 aa20.2■□□□□ 0.82
VCX3A-201ENST00000381089 TDRD7Q8NHU6 1098 aaKnown RBP20.2■□□□□ 0.82
VCX3A-201ENST00000381089 SRCIN1Q9C0H9 1055 aa20.2■□□□□ 0.82
VCX3A-201ENST00000381089 ZNF70Q9UC06 446 aaPredicted RBP20.2■□□□□ 0.82
VCX3A-201ENST00000381089 SP3Q02447 781 aa20.19■□□□□ 0.82
VCX3A-201ENST00000381089 OPTNQ96CV9 577 aa20.19■□□□□ 0.82
VCX3A-201ENST00000381089 ELP3Q9H9T3 547 aa20.19■□□□□ 0.82
VCX3A-201ENST00000381089 EFCC1Q9HA90 598 aa20.19■□□□□ 0.82
VCX3A-201ENST00000381089 PTPN22Q9Y2R2 807 aa20.19■□□□□ 0.82
VCX3A-201ENST00000381089 TESPA1A2RU30 521 aaPredicted RBP20.18■□□□□ 0.82
VCX3A-201ENST00000381089 ANP32CO43423 234 aa20.18■□□□□ 0.82
VCX3A-201ENST00000381089 GYG1P46976 350 aa20.18■□□□□ 0.82
VCX3A-201ENST00000381089 DZIP1LQ8IYY4 767 aaKnown RBP20.18■□□□□ 0.82
VCX3A-201ENST00000381089 CD99L2Q8TCZ2 262 aa20.18■□□□□ 0.82
VCX3A-201ENST00000381089 TDRD3Q9H7E2 651 aaKnown RBP20.18■□□□□ 0.82
VCX3A-201ENST00000381089 MROH5Q6ZUA9 1318 aa20.18■□□□□ 0.82
VCX3A-201ENST00000381089 FRAT2O75474 233 aaPredicted RBP20.17■□□□□ 0.82
VCX3A-201ENST00000381089 WDHD1O75717 1129 aaPredicted RBP20.17■□□□□ 0.82
VCX3A-201ENST00000381089 GJA5P36382 358 aa20.17■□□□□ 0.82
VCX3A-201ENST00000381089 FAM84BQ96KN1 310 aaPredicted RBP20.17■□□□□ 0.82
VCX3A-201ENST00000381089 CSADQ9Y600 493 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms