RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ASIC1P78348 528 aa19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 BRD3Q15059 726 aa19.3■□□□□ 0.68
COL4A3BP-203ENST00000380494 WASLO00401 505 aaPredicted RBP19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 ARHGAP6O43182 974 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 IFT20Q8IY31 132 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 ESR2Q92731 530 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 STMN2Q93045 179 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 LLPHQ9BRT6 129 aaKnown RBP19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 RAB11FIP4Q86YS3 637 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 CIB2O75838 187 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 RLBP1P12271 317 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 DHX32Q7L7V1 743 aaKnown RBP19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 UBLCP1Q8WVY7 318 aaPredicted RBP19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 TSPY2A6NKD2 308 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 KRT2P35908 639 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 DMTNQ08495 405 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 PPFIA1Q13136 1202 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 GRIPAP1Q4V328 841 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 CRACR2BQ8N4Y2 399 aaPredicted RBP19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 C14orf93Q9H972 538 aaKnown RBP19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 SEC62Q99442 399 aaKnown RBP19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 LRRC2Q9BYS8 371 aa19.29■□□□□ 0.68
COL4A3BP-203ENST00000380494 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
COL4A3BP-203ENST00000380494 ANAPC4Q9UJX5 808 aa19.28■□□□□ 0.68
COL4A3BP-203ENST00000380494 MAP2K2P36507 400 aa19.28■□□□□ 0.68
COL4A3BP-203ENST00000380494 CCDC174Q6PII3 467 aa19.28■□□□□ 0.68
COL4A3BP-203ENST00000380494 TMOD2Q9NZR1 351 aa19.28■□□□□ 0.68
COL4A3BP-203ENST00000380494 C8orf74Q6P047 294 aa19.28■□□□□ 0.68
COL4A3BP-203ENST00000380494 RUFY4Q6ZNE9 571 aa19.28■□□□□ 0.68
COL4A3BP-203ENST00000380494 SETSIPP0DME0 302 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 ZSCAN26Q16670 478 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 IFIT1BQ5T764 474 aaKnown RBP19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 NKIRAS1Q9NYS0 192 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 GOLGA6BA6NDN3 693 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 FANCCQ00597 558 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 TSNAXIP1Q2TAA8 658 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 IGSF22Q8N9C0 903 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 CCDC110Q8TBZ0 833 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 VGLL3A8MV65 326 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 CALML3P27482 149 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 LRRC45Q96CN5 670 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 TCEANC2Q96MN5 208 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 MTUS1Q9ULD2 1270 aa19.27■□□□□ 0.68
COL4A3BP-203ENST00000380494 PRAG1Q86YV5 1406 aa19.27■□□□□ 0.67
COL4A3BP-203ENST00000380494 TMOD3Q9NYL9 352 aa19.27■□□□□ 0.67
COL4A3BP-203ENST00000380494 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.67
COL4A3BP-203ENST00000380494 SOS1Q07889 1333 aaPredicted RBP19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 NOS1P29475 1434 aa19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 ATP2A2P16615 1042 aaKnown RBP19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 NLRP12P59046 1061 aa19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 RPGRIP1Q96KN7 1286 aa19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 TRMT112Q9UI30 125 aaKnown RBP19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 CALCOCO2Q13137 446 aa19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 IQUBQ8NA54 791 aa19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 MYCBPQ99417 103 aaPredicted RBP19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 LDHCP07864 332 aa19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 KCNK9Q9NPC2 374 aa19.26■□□□□ 0.67
COL4A3BP-203ENST00000380494 PPFIA3O75145 1194 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 PCK1P35558 622 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 KIAA1524Q8TCG1 905 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 FEZ2Q9UHY8 353 aaPredicted RBP19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 MPRIPQ6WCQ1 1025 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 TMTC1Q8IUR5 882 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 KIF3CO14782 793 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 RPS6KB1P23443 525 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 HMGB2P26583 209 aaKnown RBP19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 VWA3BQ502W6 1294 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 VCXQ9H320 206 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 GSTA5Q7RTV2 222 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 NUP58Q9BVL2 599 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 TEX13AQ9BXU3 409 aaPredicted RBP19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 TSKSQ9UJT2 592 aa19.25■□□□□ 0.67
COL4A3BP-203ENST00000380494 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 PPFIA4O75335 1185 aa19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 BAG3O95817 575 aa19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 VIMP08670 466 aaKnown RBP19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 APOBRQ0VD83 1088 aa19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 SF3B2Q13435 895 aaKnown RBP19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 FYB2Q5VWT5 728 aa19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 RNF113AO15541 343 aaKnown RBP19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 GNAT2P19087 354 aa19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 MTMR3Q13615 1198 aa19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 CLUL1Q15846 466 aa19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 PAG1Q9NWQ8 432 aa19.24■□□□□ 0.67
COL4A3BP-203ENST00000380494 IL15P40933 162 aaPredicted RBP19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 WAPLQ7Z5K2 1190 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 SH3BGRP55822 239 aaPredicted RBP19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 LDHAL6AQ6ZMR3 332 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 C8orf58Q8NAV2 365 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 GOLGA5Q8TBA6 731 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 ZFYVE9O95405 1425 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 STX17P56962 302 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 SEL1L2Q5TEA6 688 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 MLKLQ8NB16 471 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 SNRKQ9NRH2 765 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 PPP1R7Q15435 360 aa19.23■□□□□ 0.67
COL4A3BP-203ENST00000380494 UBE3BQ7Z3V4 1068 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms