RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.64■■□□□ 1.54
RER1-204ENST00000378518 FAM205AQ6ZU69 1335 aa24.63■■□□□ 1.53
RER1-204ENST00000378518 APBB1O00213 710 aa24.63■■□□□ 1.53
RER1-204ENST00000378518 EPS15P42566 896 aa24.63■■□□□ 1.53
RER1-204ENST00000378518 FKBP1AP62942 108 aaKnown RBP24.63■■□□□ 1.53
RER1-204ENST00000378518 IRX6P78412 446 aaPredicted RBP24.62■■□□□ 1.53
RER1-204ENST00000378518 CHAF1AQ13111 956 aaPredicted RBP24.62■■□□□ 1.53
RER1-204ENST00000378518 CCDC102BQ68D86 513 aa24.62■■□□□ 1.53
RER1-204ENST00000378518 JAG2Q9Y219 1238 aa24.62■■□□□ 1.53
RER1-204ENST00000378518 SEMA3EO15041 775 aa24.61■■□□□ 1.53
RER1-204ENST00000378518 TOMM70O94826 608 aa24.61■■□□□ 1.53
RER1-204ENST00000378518 USP17L8P0C7I0 530 aa24.61■■□□□ 1.53
RER1-204ENST00000378518 PHKA1P46020 1223 aa24.61■■□□□ 1.53
RER1-204ENST00000378518 EAPPQ56P03 285 aaPredicted RBP24.61■■□□□ 1.53
RER1-204ENST00000378518 USP50Q70EL3 339 aaPredicted RBP24.61■■□□□ 1.53
RER1-204ENST00000378518 CLASRPQ8N2M8 674 aaKnown RBP24.61■■□□□ 1.53
RER1-204ENST00000378518 TBC1D22AQ8WUA7 517 aa24.61■■□□□ 1.53
RER1-204ENST00000378518 MXD3Q9BW11 206 aa24.61■■□□□ 1.53
RER1-204ENST00000378518 MMP14P50281 582 aa24.6■■□□□ 1.53
RER1-204ENST00000378518 OGFOD1Q8N543 542 aa24.6■■□□□ 1.53
RER1-204ENST00000378518 GMLQ99445 158 aa24.6■■□□□ 1.53
RER1-204ENST00000378518 DCTPP1Q9H773 170 aa24.6■■□□□ 1.53
RER1-204ENST00000378518 HDAC9Q9UKV0 1011 aa24.6■■□□□ 1.53
RER1-204ENST00000378518 DENND2AQ9ULE3 1009 aa24.6■■□□□ 1.53
RER1-204ENST00000378518 ADAMTSL1Q8N6G6 1762 aa24.59■■□□□ 1.53
RER1-204ENST00000378518 CCDC158Q5M9N0 1113 aa24.59■■□□□ 1.53
RER1-204ENST00000378518 MFSD14BQ5SR56 506 aa24.59■■□□□ 1.53
RER1-204ENST00000378518 LRRCC1Q9C099 1032 aa24.59■■□□□ 1.53
RER1-204ENST00000378518 IL1RAPL2Q9NP60 686 aa24.59■■□□□ 1.53
RER1-204ENST00000378518 ZBTB22O15209 634 aa24.58■■□□□ 1.53
RER1-204ENST00000378518 AACSQ86V21 672 aa24.58■■□□□ 1.53
RER1-204ENST00000378518 LDHDQ86WU2 507 aa24.58■■□□□ 1.53
RER1-204ENST00000378518 KIAA0825Q8IV33 1275 aa24.58■■□□□ 1.53
RER1-204ENST00000378518 RBM46Q8TBY0 533 aaKnown RBP24.58■■□□□ 1.53
RER1-204ENST00000378518 WDR66Q8TBY9 1149 aa24.58■■□□□ 1.53
RER1-204ENST00000378518 EAF2Q96CJ1 260 aaPredicted RBP24.58■■□□□ 1.53
RER1-204ENST00000378518 DBNDD2Q9BQY9 259 aa24.58■■□□□ 1.53
RER1-204ENST00000378518 CLEC11AQ9Y240 323 aa24.58■■□□□ 1.53
RER1-204ENST00000378518 SHTN1A0MZ66 631 aa24.57■■□□□ 1.52
RER1-204ENST00000378518 UQCRFS1P1P0C7P4 283 aa24.57■■□□□ 1.52
RER1-204ENST00000378518 TTC39AQ5SRH9 613 aa24.57■■□□□ 1.52
RER1-204ENST00000378518 CCDC8Q9H0W5 538 aaPredicted RBP24.57■■□□□ 1.52
RER1-204ENST00000378518 ZNF280AP59817 542 aaPredicted RBP24.56■■□□□ 1.52
RER1-204ENST00000378518 HDAC1Q13547 482 aaPredicted RBP24.56■■□□□ 1.52
RER1-204ENST00000378518 CERS5Q8N5B7 392 aa24.56■■□□□ 1.52
RER1-204ENST00000378518 SMC1BQ8NDV3 1235 aa24.56■■□□□ 1.52
RER1-204ENST00000378518 IFIT2P09913 472 aaKnown RBP24.55■■□□□ 1.52
RER1-204ENST00000378518 ARID4AP29374 1257 aaPredicted RBP24.55■■□□□ 1.52
RER1-204ENST00000378518 KIF4BQ2VIQ3 1234 aa24.55■■□□□ 1.52
RER1-204ENST00000378518 TBC1D10BQ4KMP7 808 aaPredicted RBP24.55■■□□□ 1.52
RER1-204ENST00000378518 SAMD7Q7Z3H4 446 aa24.55■■□□□ 1.52
RER1-204ENST00000378518 BCL11AQ9H165 835 aa24.55■■□□□ 1.52
RER1-204ENST00000378518 RWDD1Q9H446 243 aaPredicted RBP24.55■■□□□ 1.52
RER1-204ENST00000378518 MYOZ2Q9NPC6 264 aa24.55■■□□□ 1.52
RER1-204ENST00000378518 DBNLQ9UJU6 430 aaKnown RBP24.55■■□□□ 1.52
RER1-204ENST00000378518 COL1A1P02452 1464 aaPredicted RBP24.55■■□□□ 1.52
RER1-204ENST00000378518 PDS5AQ29RF7 1337 aaKnown RBP24.55■■□□□ 1.52
RER1-204ENST00000378518 ECM29Q5VYK3 1845 aa24.54■■□□□ 1.52
RER1-204ENST00000378518 F8W031 263 aaPredicted RBP24.54■■□□□ 1.52
RER1-204ENST00000378518 RASGRF1Q13972 1273 aa24.54■■□□□ 1.52
RER1-204ENST00000378518 RBM26Q5T8P6 1007 aaKnown RBP24.54■■□□□ 1.52
RER1-204ENST00000378518 CHADLQ6NUI6 762 aa24.54■■□□□ 1.52
RER1-204ENST00000378518 ZGPATQ8N5A5 531 aaKnown RBP24.54■■□□□ 1.52
RER1-204ENST00000378518 TRPM4Q8TD43 1214 aa24.54■■□□□ 1.52
RER1-204ENST00000378518 ZBTB47Q9UFB7 747 aaPredicted RBP24.54■■□□□ 1.52
RER1-204ENST00000378518 GCC1Q96CN9 775 aa24.53■■□□□ 1.52
RER1-204ENST00000378518 TLR7Q9NYK1 1049 aaKnown RBP24.53■■□□□ 1.52
RER1-204ENST00000378518 SUGT1Q9Y2Z0 365 aa24.53■■□□□ 1.52
RER1-204ENST00000378518 AKAP11Q9UKA4 1901 aa24.53■■□□□ 1.52
RER1-204ENST00000378518 POTEIP0CG38 1075 aa24.52■■□□□ 1.52
RER1-204ENST00000378518 POTEJP0CG39 1038 aa24.52■■□□□ 1.52
RER1-204ENST00000378518 FSTL1Q12841 308 aa24.52■■□□□ 1.52
RER1-204ENST00000378518 TTF2Q9UNY4 1162 aaKnown RBP24.52■■□□□ 1.52
RER1-204ENST00000378518 MAST3O60307 1309 aa24.52■■□□□ 1.52
RER1-204ENST00000378518 SALL1Q9NSC2 1324 aa24.52■■□□□ 1.52
RER1-204ENST00000378518 SPATA5Q8NB90 893 aa24.51■■□□□ 1.51
RER1-204ENST00000378518 ZC3H15Q8WU90 426 aaKnown RBP24.51■■□□□ 1.51
RER1-204ENST00000378518 ZNF512BQ96KM6 892 aaPredicted RBP24.51■■□□□ 1.51
RER1-204ENST00000378518 SMARCA5O60264 1052 aaPredicted RBP24.5■■□□□ 1.51
RER1-204ENST00000378518 HMG20BQ9P0W2 317 aa24.5■■□□□ 1.51
RER1-204ENST00000378518 EGFRP00533 1210 aa24.49■■□□□ 1.51
RER1-204ENST00000378518 MCAMP43121 646 aa24.49■■□□□ 1.51
RER1-204ENST00000378518 HIRAP54198 1017 aaPredicted RBP24.49■■□□□ 1.51
RER1-204ENST00000378518 LDHBP07195 334 aaKnown RBP24.48■■□□□ 1.51
RER1-204ENST00000378518 NEFLP07196 543 aa24.48■■□□□ 1.51
RER1-204ENST00000378518 POLR2AP24928 1970 aaKnown RBP24.48■■□□□ 1.51
RER1-204ENST00000378518 RBM5P52756 815 aaKnown RBP eCLIP24.48■■□□□ 1.51
RER1-204ENST00000378518 C1QTNF8P60827 252 aa24.48■■□□□ 1.51
RER1-204ENST00000378518 DLGAP5Q15398 846 aa24.48■■□□□ 1.51
RER1-204ENST00000378518 SPTY2D1Q68D10 685 aaPredicted RBP24.48■■□□□ 1.51
RER1-204ENST00000378518 SERPINA10Q9UK55 444 aa24.48■■□□□ 1.51
RER1-204ENST00000378518 CFAP100Q494V2 611 aa24.47■■□□□ 1.51
RER1-204ENST00000378518 ABCF2Q9UG63 623 aa24.47■■□□□ 1.51
RER1-204ENST00000378518 MYH2Q9UKX2 1941 aa24.47■■□□□ 1.51
RER1-204ENST00000378518 MAST2Q6P0Q8 1798 aa24.47■■□□□ 1.51
RER1-204ENST00000378518 HDLBPQ00341 1268 aaKnown RBP24.46■■□□□ 1.51
RER1-204ENST00000378518 SCARF1Q14162 830 aa24.46■■□□□ 1.51
RER1-204ENST00000378518 MAP1SQ66K74 1059 aaPredicted RBP24.46■■□□□ 1.51
RER1-204ENST00000378518 MTMR14Q8NCE2 650 aa24.46■■□□□ 1.51
RER1-204ENST00000378518 TEKT1Q969V4 418 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms