RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 BOLA2Q9H3K6 86 aa23.38■■□□□ 1.33
SPSB1-203ENST00000377399 SEMA3EO15041 775 aa23.37■■□□□ 1.33
SPSB1-203ENST00000377399 IARSP41252 1262 aaKnown RBP23.37■■□□□ 1.33
SPSB1-203ENST00000377399 TTC22Q5TAA0 569 aa23.37■■□□□ 1.33
SPSB1-203ENST00000377399 LARGE2Q8N3Y3 721 aa23.37■■□□□ 1.33
SPSB1-203ENST00000377399 DENND2AQ9ULE3 1009 aa23.37■■□□□ 1.33
SPSB1-203ENST00000377399 GLTPD2A6NH11 291 aa23.36■■□□□ 1.33
SPSB1-203ENST00000377399 DNAJC2Q99543 621 aaKnown RBP23.36■■□□□ 1.33
SPSB1-203ENST00000377399 CD209Q9NNX6 404 aa23.36■■□□□ 1.33
SPSB1-203ENST00000377399 IQSEC3Q9UPP2 1182 aaPredicted RBP23.36■■□□□ 1.33
SPSB1-203ENST00000377399 MCAMP43121 646 aa23.35■■□□□ 1.33
SPSB1-203ENST00000377399 RASGRF1Q13972 1273 aa23.35■■□□□ 1.33
SPSB1-203ENST00000377399 DOK7Q18PE1 504 aa23.35■■□□□ 1.33
SPSB1-203ENST00000377399 SMC1BQ8NDV3 1235 aa23.35■■□□□ 1.33
SPSB1-203ENST00000377399 DBNDD1Q9H9R9 158 aa23.35■■□□□ 1.33
SPSB1-203ENST00000377399 ECE2O60344 883 aa23.34■■□□□ 1.33
SPSB1-203ENST00000377399 IL1R1P14778 569 aa23.34■■□□□ 1.33
SPSB1-203ENST00000377399 VEGFAP15692 232 aaPredicted RBP23.34■■□□□ 1.33
SPSB1-203ENST00000377399 NIM1KQ8IY84 436 aa23.34■■□□□ 1.33
SPSB1-203ENST00000377399 SPATA5Q8NB90 893 aa23.34■■□□□ 1.33
SPSB1-203ENST00000377399 TDRD7Q8NHU6 1098 aaKnown RBP23.34■■□□□ 1.33
SPSB1-203ENST00000377399 HAUS7Q99871 368 aa23.34■■□□□ 1.33
SPSB1-203ENST00000377399 WDR90Q96KV7 1748 aa23.33■■□□□ 1.33
SPSB1-203ENST00000377399 TRIM6-TRIM34B2RNG4 842 aa23.33■■□□□ 1.33
SPSB1-203ENST00000377399 CHAF1AQ13111 956 aaPredicted RBP23.33■■□□□ 1.33
SPSB1-203ENST00000377399 SCARF1Q14162 830 aa23.33■■□□□ 1.33
SPSB1-203ENST00000377399 PODNQ7Z5L7 613 aa23.33■■□□□ 1.33
SPSB1-203ENST00000377399 SNRKQ9NRH2 765 aa23.33■■□□□ 1.33
SPSB1-203ENST00000377399 PDS5AQ29RF7 1337 aaKnown RBP23.33■■□□□ 1.32
SPSB1-203ENST00000377399 PRELPP51888 382 aa23.32■■□□□ 1.32
SPSB1-203ENST00000377399 DPY19L2Q6NUT2 758 aa23.32■■□□□ 1.32
SPSB1-203ENST00000377399 CNTROBQ8N137 903 aa23.32■■□□□ 1.32
SPSB1-203ENST00000377399 JDP2Q8WYK2 163 aa23.32■■□□□ 1.32
SPSB1-203ENST00000377399 HMG20BQ9P0W2 317 aa23.32■■□□□ 1.32
SPSB1-203ENST00000377399 AKAP11Q9UKA4 1901 aa23.31■■□□□ 1.32
SPSB1-203ENST00000377399 ZBTB22O15209 634 aa23.31■■□□□ 1.32
SPSB1-203ENST00000377399 MAP4K4O95819 1239 aaPredicted RBP23.31■■□□□ 1.32
SPSB1-203ENST00000377399 GSPT1P15170 499 aaKnown RBP23.31■■□□□ 1.32
SPSB1-203ENST00000377399 ZAP70P43403 619 aa23.31■■□□□ 1.32
SPSB1-203ENST00000377399 BMP2KLQ5H9B9 411 aa23.31■■□□□ 1.32
SPSB1-203ENST00000377399 PI16Q6UXB8 463 aa23.31■■□□□ 1.32
SPSB1-203ENST00000377399 FBXW7Q969H0 707 aa23.31■■□□□ 1.32
SPSB1-203ENST00000377399 KLRG1Q96E93 195 aa23.31■■□□□ 1.32
SPSB1-203ENST00000377399 PAG1Q9NWQ8 432 aa23.31■■□□□ 1.32
SPSB1-203ENST00000377399 COL1A1P02452 1464 aaPredicted RBP23.3■■□□□ 1.32
SPSB1-203ENST00000377399 GOLIM4O00461 696 aa23.3■■□□□ 1.32
SPSB1-203ENST00000377399 TTF1Q15361 905 aaPredicted RBP23.3■■□□□ 1.32
SPSB1-203ENST00000377399 RILPL2Q969X0 211 aa23.3■■□□□ 1.32
SPSB1-203ENST00000377399 NDUFB9Q9Y6M9 179 aa23.3■■□□□ 1.32
SPSB1-203ENST00000377399 AK9Q5TCS8 1911 aa23.29■■□□□ 1.32
SPSB1-203ENST00000377399 WDR66Q8TBY9 1149 aa23.29■■□□□ 1.32
SPSB1-203ENST00000377399 EVI5LQ96CN4 794 aa23.29■■□□□ 1.32
SPSB1-203ENST00000377399 HTRA3P83110 453 aa23.28■■□□□ 1.32
SPSB1-203ENST00000377399 ZGPATQ8N5A5 531 aaKnown RBP23.28■■□□□ 1.32
SPSB1-203ENST00000377399 JAG2Q9Y219 1238 aa23.28■■□□□ 1.32
SPSB1-203ENST00000377399 CCDC88AQ3V6T2 1871 aa23.28■■□□□ 1.32
SPSB1-203ENST00000377399 GTF2IP78347 998 aa23.27■■□□□ 1.32
SPSB1-203ENST00000377399 TBC1D22AQ8WUA7 517 aa23.27■■□□□ 1.32
SPSB1-203ENST00000377399 EDC3Q96F86 508 aaKnown RBP23.27■■□□□ 1.32
SPSB1-203ENST00000377399 FSD1Q9BTV5 496 aa23.27■■□□□ 1.32
SPSB1-203ENST00000377399 ZNRF3Q9ULT6 936 aa23.27■■□□□ 1.32
SPSB1-203ENST00000377399 COL4A5P29400 1685 aa23.26■■□□□ 1.31
SPSB1-203ENST00000377399 CYP2E1P05181 493 aaPredicted RBP23.26■■□□□ 1.31
SPSB1-203ENST00000377399 SDSP20132 328 aa23.26■■□□□ 1.31
SPSB1-203ENST00000377399 TTLL5Q6EMB2 1281 aa23.26■■□□□ 1.31
SPSB1-203ENST00000377399 JMYQ8N9B5 988 aa23.26■■□□□ 1.31
SPSB1-203ENST00000377399 FAM205AQ6ZU69 1335 aa23.26■■□□□ 1.31
SPSB1-203ENST00000377399 TIAM2Q8IVF5 1701 aa23.25■■□□□ 1.31
SPSB1-203ENST00000377399 USP17L3A6NCW0 530 aa23.25■■□□□ 1.31
SPSB1-203ENST00000377399 USP17L4A6NCW7 530 aa23.25■■□□□ 1.31
SPSB1-203ENST00000377399 LRRFIP1Q32MZ4 808 aaKnown RBP23.25■■□□□ 1.31
SPSB1-203ENST00000377399 USP17L1Q7RTZ2 530 aa23.25■■□□□ 1.31
SPSB1-203ENST00000377399 ANTXR1Q9H6X2 564 aa23.25■■□□□ 1.31
SPSB1-203ENST00000377399 ABCF2Q9UG63 623 aa23.25■■□□□ 1.31
SPSB1-203ENST00000377399 DICER1Q9UPY3 1922 aaKnown RBP23.25■■□□□ 1.31
SPSB1-203ENST00000377399 SCN9AQ15858 1988 aa23.24■■□□□ 1.31
SPSB1-203ENST00000377399 YDJCA8MPS7 323 aa23.24■■□□□ 1.31
SPSB1-203ENST00000377399 MFSD14BQ5SR56 506 aa23.24■■□□□ 1.31
SPSB1-203ENST00000377399 STRIP1Q5VSL9 837 aa23.24■■□□□ 1.31
SPSB1-203ENST00000377399 SPTY2D1Q68D10 685 aaPredicted RBP23.24■■□□□ 1.31
SPSB1-203ENST00000377399 KBTBD3Q8NAB2 608 aa23.24■■□□□ 1.31
SPSB1-203ENST00000377399 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.24■■□□□ 1.31
SPSB1-203ENST00000377399 LRP2BPQ9P2M1 347 aa23.24■■□□□ 1.31
SPSB1-203ENST00000377399 SALL1Q9NSC2 1324 aa23.24■■□□□ 1.31
SPSB1-203ENST00000377399 PSME4Q14997 1843 aa23.24■■□□□ 1.31
SPSB1-203ENST00000377399 IDH1O75874 414 aaKnown RBP23.23■■□□□ 1.31
SPSB1-203ENST00000377399 EIF6P56537 245 aaKnown RBP23.23■■□□□ 1.31
SPSB1-203ENST00000377399 TBC1D9Q6ZT07 1266 aa23.23■■□□□ 1.31
SPSB1-203ENST00000377399 PIH1D3Q9NQM4 214 aaKnown RBP23.23■■□□□ 1.31
SPSB1-203ENST00000377399 RFX7Q2KHR2 1363 aa23.23■■□□□ 1.31
SPSB1-203ENST00000377399 DOCK2Q92608 1830 aa23.22■■□□□ 1.31
SPSB1-203ENST00000377399 RAD17O75943 681 aa23.22■■□□□ 1.31
SPSB1-203ENST00000377399 MAP3K12Q12852 859 aa23.22■■□□□ 1.31
SPSB1-203ENST00000377399 ZSCAN25Q6NSZ9 544 aa23.22■■□□□ 1.31
SPSB1-203ENST00000377399 ERICH6Q7L0X2 663 aa23.22■■□□□ 1.31
SPSB1-203ENST00000377399 RAI14Q9P0K7 980 aa23.22■■□□□ 1.31
SPSB1-203ENST00000377399 LDHBP07195 334 aaKnown RBP23.21■■□□□ 1.31
SPSB1-203ENST00000377399 CIAPIN1Q6FI81 312 aa23.21■■□□□ 1.31
SPSB1-203ENST00000377399 CASC1Q6TDU7 716 aa23.21■■□□□ 1.31
SPSB1-203ENST00000377399 KCNQ5Q9NR82 932 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms