RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 GOLPH3LQ9H4A5 285 aa16.15■□□□□ 0.18
SF1-205ENST00000377394 NCOA5Q9HCD5 579 aaKnown RBP16.15■□□□□ 0.18
SF1-205ENST00000377394 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
SF1-205ENST00000377394 CAVIN2O95810 425 aa16.15■□□□□ 0.18
SF1-205ENST00000377394 PDIA3P30101 505 aaKnown RBP16.15■□□□□ 0.18
SF1-205ENST00000377394 IQCB1Q15051 598 aa16.15■□□□□ 0.18
SF1-205ENST00000377394 USP28Q96RU2 1077 aa16.15■□□□□ 0.18
SF1-205ENST00000377394 MYH15Q9Y2K3 1946 aa16.15■□□□□ 0.18
SF1-205ENST00000377394 A0A1B0GUL7 405 aa16.14■□□□□ 0.17
SF1-205ENST00000377394 A1BGP04217 495 aa16.14■□□□□ 0.17
SF1-205ENST00000377394 IFIT1P09914 478 aaKnown RBP16.14■□□□□ 0.17
SF1-205ENST00000377394 SNW1Q13573 536 aaKnown RBP16.14■□□□□ 0.17
SF1-205ENST00000377394 ILDR1Q86SU0 546 aaPredicted RBP16.14■□□□□ 0.17
SF1-205ENST00000377394 CCAR1Q8IX12 1150 aaKnown RBP16.14■□□□□ 0.17
SF1-205ENST00000377394 ZNF274Q96GC6 653 aaPredicted RBP16.14■□□□□ 0.17
SF1-205ENST00000377394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.14■□□□□ 0.17
SF1-205ENST00000377394 M0R2C6 588 aa16.14■□□□□ 0.17
SF1-205ENST00000377394 CIAO1O76071 339 aa16.14■□□□□ 0.17
SF1-205ENST00000377394 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
SF1-205ENST00000377394 ZFP91Q96JP5 570 aaPredicted RBP16.14■□□□□ 0.17
SF1-205ENST00000377394 TRMT1Q9NXH9 659 aaKnown RBP16.14■□□□□ 0.17
SF1-205ENST00000377394 CPDO75976 1380 aa16.14■□□□□ 0.17
SF1-205ENST00000377394 PUS3Q9BZE2 481 aaKnown RBP16.13■□□□□ 0.17
SF1-205ENST00000377394 ATG3Q9NT62 314 aa16.13■□□□□ 0.17
SF1-205ENST00000377394 CLIP2Q9UDT6 1046 aa16.13■□□□□ 0.17
SF1-205ENST00000377394 ATL3Q6DD88 541 aa16.13■□□□□ 0.17
SF1-205ENST00000377394 TTLL5Q6EMB2 1281 aa16.13■□□□□ 0.17
SF1-205ENST00000377394 C11orf57Q6ZUT1 292 aaPredicted RBP16.13■□□□□ 0.17
SF1-205ENST00000377394 CHST3Q7LGC8 479 aa16.13■□□□□ 0.17
SF1-205ENST00000377394 ENGASEQ8NFI3 743 aa16.13■□□□□ 0.17
SF1-205ENST00000377394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.13■□□□□ 0.17
SF1-205ENST00000377394 NOL10Q9BSC4 688 aaKnown RBP16.13■□□□□ 0.17
SF1-205ENST00000377394 FEZ2Q9UHY8 353 aaPredicted RBP16.13■□□□□ 0.17
SF1-205ENST00000377394 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
SF1-205ENST00000377394 CTAGE5O15320 804 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 CYP2C19P33261 490 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 FBXL16Q8N461 479 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 OSBP2Q969R2 916 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 UBR2Q8IWV8 1755 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 PPFIA3O75145 1194 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 CDC25BP30305 580 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 EVCP57679 992 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 SPATA31A3Q5VYP0 1347 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 DCCP43146 1447 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 SPEF2Q9C093 1822 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 FOXP2O15409 715 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 FDPSP14324 419 aaKnown RBP16.12■□□□□ 0.17
SF1-205ENST00000377394 SARM1Q6SZW1 724 aa16.12■□□□□ 0.17
SF1-205ENST00000377394 ZNF396Q96N95 335 aaPredicted RBP16.12■□□□□ 0.17
SF1-205ENST00000377394 LRRN4CLQ8ND94 238 aa16.11■□□□□ 0.17
SF1-205ENST00000377394 CARMIL3Q8ND23 1372 aa16.11■□□□□ 0.17
SF1-205ENST00000377394 ERVV-2B6SEH9 535 aa16.11■□□□□ 0.17
SF1-205ENST00000377394 GUCY1B3Q02153 619 aa16.11■□□□□ 0.17
SF1-205ENST00000377394 STX1AQ16623 288 aa16.11■□□□□ 0.17
SF1-205ENST00000377394 RAD51AP2Q09MP3 1159 aa16.1■□□□□ 0.17
SF1-205ENST00000377394 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
SF1-205ENST00000377394 ZCRB1Q8TBF4 217 aaKnown RBP16.1■□□□□ 0.17
SF1-205ENST00000377394 SYTL4Q96C24 671 aaPredicted RBP16.1■□□□□ 0.17
SF1-205ENST00000377394 GPHNQ9NQX3 736 aaPredicted RBP16.1■□□□□ 0.17
SF1-205ENST00000377394 PCDH11XQ9BZA7 1347 aa16.1■□□□□ 0.17
SF1-205ENST00000377394 PCDH11YQ9BZA8 1340 aa16.1■□□□□ 0.17
SF1-205ENST00000377394 FAM160A1Q05DH4 1040 aa16.1■□□□□ 0.17
SF1-205ENST00000377394 CCDC73Q6ZRK6 1079 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 ADORA1P30542 326 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 ERCC6LQ2NKX8 1250 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 NYAP1Q6ZVC0 841 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 CEP126Q9P2H0 1117 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
SF1-205ENST00000377394 LRRC8AQ8IWT6 810 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 FSIP1Q8NA03 581 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 MRFAP1L1Q96HT8 127 aa16.09■□□□□ 0.17
SF1-205ENST00000377394 NWD2Q9ULI1 1742 aa16.08■□□□□ 0.17
SF1-205ENST00000377394 A0A087WWV3 80 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 GOLGA6L19H0YKK7 550 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 KINO60870 393 aaKnown RBP16.08■□□□□ 0.16
SF1-205ENST00000377394 ME1P48163 572 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 NKX1-1Q15270 411 aaPredicted RBP16.08■□□□□ 0.16
SF1-205ENST00000377394 DHX40Q8IX18 779 aaKnown RBP16.08■□□□□ 0.16
SF1-205ENST00000377394 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.08■□□□□ 0.16
SF1-205ENST00000377394 FHOD1Q9Y613 1164 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 PAPPAQ13219 1627 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 CHMP4CQ96CF2 233 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 XAGE2Q96GT9 111 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 RTEL1Q9NZ71 1219 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 PCDHA7Q9UN72 937 aa16.08■□□□□ 0.16
SF1-205ENST00000377394 SKILP12757 684 aa16.07■□□□□ 0.16
SF1-205ENST00000377394 WDR17Q8IZU2 1322 aa16.07■□□□□ 0.16
SF1-205ENST00000377394 POLR3GO15318 223 aaPredicted RBP16.07■□□□□ 0.16
SF1-205ENST00000377394 SLU7O95391 586 aaKnown RBP16.07■□□□□ 0.16
SF1-205ENST00000377394 SCARF1Q14162 830 aa16.07■□□□□ 0.16
SF1-205ENST00000377394 FMR1NBQ8N0W7 255 aaPredicted RBP16.07■□□□□ 0.16
SF1-205ENST00000377394 TNS2Q63HR2 1409 aa16.07■□□□□ 0.16
SF1-205ENST00000377394 FGAP02671 866 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 HAND2P61296 217 aa16.06■□□□□ 0.16
SF1-205ENST00000377394 IRX3P78415 501 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms