RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 IMPACTQ9P2X3 320 aa19.21■□□□□ 0.67
VARS-215ENST00000375663 KRI1Q8N9T8 703 aaKnown RBP19.21■□□□□ 0.67
VARS-215ENST00000375663 USP5P45974 858 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 TDRD12Q587J7 1177 aaKnown RBP19.2■□□□□ 0.66
VARS-215ENST00000375663 ZBTB9Q96C00 473 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 EYA2O00167 538 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 ATP5JP18859 108 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 CEP112Q8N8E3 955 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 TRIM47Q96LD4 638 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 USP28Q96RU2 1077 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 PUF60Q9UHX1 559 aaKnown RBP19.2■□□□□ 0.66
VARS-215ENST00000375663 KAT6BQ8WYB5 2073 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 CTAGE9A4FU28 777 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 NUTM2BA6NNL0 878 aaPredicted RBP19.2■□□□□ 0.66
VARS-215ENST00000375663 NUTM2EB1AL46 878 aaPredicted RBP19.2■□□□□ 0.66
VARS-215ENST00000375663 NUTM2AQ8IVF1 878 aaPredicted RBP19.2■□□□□ 0.66
VARS-215ENST00000375663 KIAA1524Q8TCG1 905 aa19.2■□□□□ 0.66
VARS-215ENST00000375663 MEX3CQ5U5Q3 659 aaKnown RBP19.19■□□□□ 0.66
VARS-215ENST00000375663 POLR1AO95602 1720 aaPredicted RBP19.19■□□□□ 0.66
VARS-215ENST00000375663 TRIM21P19474 475 aaKnown RBP19.19■□□□□ 0.66
VARS-215ENST00000375663 CARD6Q9BX69 1037 aa19.19■□□□□ 0.66
VARS-215ENST00000375663 ENOX2Q16206 610 aaKnown RBP19.19■□□□□ 0.66
VARS-215ENST00000375663 ZFYVE27Q5T4F4 411 aa19.19■□□□□ 0.66
VARS-215ENST00000375663 ESR2Q92731 530 aa19.19■□□□□ 0.66
VARS-215ENST00000375663 MAP4K1Q92918 833 aa19.19■□□□□ 0.66
VARS-215ENST00000375663 PDLIM2Q96JY6 352 aa19.19■□□□□ 0.66
VARS-215ENST00000375663 TCP11L1Q9NUJ3 509 aa19.19■□□□□ 0.66
VARS-215ENST00000375663 SLC4A4Q9Y6R1 1079 aa19.19■□□□□ 0.66
VARS-215ENST00000375663 ZNF215Q9UL58 517 aaPredicted RBP19.19■□□□□ 0.66
VARS-215ENST00000375663 MRVI1Q9Y6F6 885 aa19.19■□□□□ 0.66
VARS-215ENST00000375663 XPO4Q9C0E2 1151 aaKnown RBP19.18■□□□□ 0.66
VARS-215ENST00000375663 NRBP1Q9UHY1 535 aa19.18■□□□□ 0.66
VARS-215ENST00000375663 CLTCL1P53675 1640 aa19.18■□□□□ 0.66
VARS-215ENST00000375663 MAP3K4Q9Y6R4 1608 aa19.18■□□□□ 0.66
VARS-215ENST00000375663 ZNF569Q5MCW4 686 aa19.18■□□□□ 0.66
VARS-215ENST00000375663 CCDC191Q8NCU4 936 aa19.18■□□□□ 0.66
VARS-215ENST00000375663 DCAF5Q96JK2 942 aa19.18■□□□□ 0.66
VARS-215ENST00000375663 ZDHHC9Q9Y397 364 aa19.18■□□□□ 0.66
VARS-215ENST00000375663 UNC13BO14795 1591 aa19.18■□□□□ 0.66
VARS-215ENST00000375663 SEC63Q9UGP8 760 aaKnown RBP19.18■□□□□ 0.66
VARS-215ENST00000375663 IDEP14735 1019 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 MATR3P43243 847 aaKnown RBP eCLIP19.17■□□□□ 0.66
VARS-215ENST00000375663 SYCP1Q15431 976 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 KLHL34Q8N239 644 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 EHBP1Q8NDI1 1231 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 ZCRB1Q8TBF4 217 aaKnown RBP19.17■□□□□ 0.66
VARS-215ENST00000375663 SIRT1Q96EB6 747 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 ATP7BP35670 1465 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 TSPY2A6NKD2 308 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 GIGYF1O75420 1035 aaPredicted RBP19.17■□□□□ 0.66
VARS-215ENST00000375663 CAPN2P17655 700 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 KIF5BP33176 963 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 RMND1Q9NWS8 449 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 KCNH3Q9ULD8 1083 aa19.17■□□□□ 0.66
VARS-215ENST00000375663 SEC62Q99442 399 aaKnown RBP19.17■□□□□ 0.66
VARS-215ENST00000375663 IQSEC3Q9UPP2 1182 aaPredicted RBP19.17■□□□□ 0.66
VARS-215ENST00000375663 CTDP1Q9Y5B0 961 aaPredicted RBP19.17■□□□□ 0.66
VARS-215ENST00000375663 FGFR1OPO95684 399 aaKnown RBP19.16■□□□□ 0.66
VARS-215ENST00000375663 NLRP12P59046 1061 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 DZIP1Q86YF9 867 aaKnown RBP19.16■□□□□ 0.66
VARS-215ENST00000375663 ZNF444Q8N0Y2 327 aaPredicted RBP19.16■□□□□ 0.66
VARS-215ENST00000375663 CROCC2H7BZ55 1655 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 AKR1B10O60218 316 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 CYP7A1P22680 504 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 MRFAP1L1Q96HT8 127 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 PHACTR2O75167 634 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 LARGE1O95461 756 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 LRRC8AQ8IWT6 810 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 KIAA1468Q9P260 1216 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 ANGEL1Q9UNK9 670 aaKnown RBP19.16■□□□□ 0.66
VARS-215ENST00000375663 ZNF652Q9Y2D9 606 aa19.16■□□□□ 0.66
VARS-215ENST00000375663 B4E1Z4 1266 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 E7EWF7 191 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 PPP2R3AQ06190 1150 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 IFIT1BQ5T764 474 aaKnown RBP19.15■□□□□ 0.66
VARS-215ENST00000375663 PLBD2Q8NHP8 589 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 ZNF594Q96JF6 807 aaPredicted RBP19.15■□□□□ 0.66
VARS-215ENST00000375663 ALS2CR12Q96Q35 445 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 TSG101Q99816 390 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 ZNF287Q9HBT7 754 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 TET3O43151 1660 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 RHOXF2BP0C7M4 288 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 CYLC1P35663 651 aaPredicted RBP19.15■□□□□ 0.66
VARS-215ENST00000375663 PIP4K2BP78356 416 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 ADALQ6DHV7 355 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 RHOXF2Q9BQY4 288 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 SHROOM2Q13796 1616 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 MADDQ8WXG6 1647 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 HELBQ8NG08 1087 aaPredicted RBP19.15■□□□□ 0.66
VARS-215ENST00000375663 APPBP2Q92624 585 aa19.15■□□□□ 0.66
VARS-215ENST00000375663 AKR1B15C9JRZ8 316 aaPredicted RBP19.14■□□□□ 0.66
VARS-215ENST00000375663 TDRD7Q8NHU6 1098 aaKnown RBP19.14■□□□□ 0.66
VARS-215ENST00000375663 RAB34Q9BZG1 259 aa19.14■□□□□ 0.66
VARS-215ENST00000375663 FAM107BQ9H098 131 aa19.14■□□□□ 0.66
VARS-215ENST00000375663 NEURL1BA8MQ27 555 aa19.14■□□□□ 0.65
VARS-215ENST00000375663 SEPT11Q9NVA2 429 aaKnown RBP19.14■□□□□ 0.65
VARS-215ENST00000375663 STAT6P42226 847 aa19.14■□□□□ 0.65
VARS-215ENST00000375663 CKAP4Q07065 602 aaKnown RBP19.14■□□□□ 0.65
VARS-215ENST00000375663 VPS18Q9P253 973 aa19.14■□□□□ 0.65
VARS-215ENST00000375663 ARHGAP6O43182 974 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms