RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 SH3GL1Q99961 368 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 TRIM37O94972 964 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 APOA1P02647 267 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 GRIN1Q05586 938 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 SMAP1Q8IYB5 467 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 SPZ1Q9BXG8 430 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 NKIRAS1Q9NYS0 192 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 TBKBP1A7MCY6 615 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 PDE4AP27815 886 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 MCM5P33992 734 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 COPB1P53618 953 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 CETN1Q12798 172 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 C18orf25Q96B23 403 aaPredicted RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 WBP11Q9Y2W2 641 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 HARSP12081 509 aaKnown RBP6.69□□□□□ -1.34
SCN2A-202ENST00000375427 CLUL1Q15846 466 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 ZNF652Q9Y2D9 606 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 AFG3L2Q9Y4W6 797 aa6.69□□□□□ -1.34
SCN2A-202ENST00000375427 GSDMDP57764 484 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 TRIM14Q14142 442 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 RCSD1Q6JBY9 416 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 KRBA2Q6ZNG9 492 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 STX12Q86Y82 276 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 KIFC3Q9BVG8 833 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 EVI5O60447 810 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 ADCK1Q86TW2 530 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 CTAGE3PQ8IX95 158 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 IL27Q8NEV9 243 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 ASZ1Q8WWH4 475 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 BRF1Q92994 677 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 SMCO3A2RU48 225 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 TMEM87AQ8NBN3 555 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 OMA1Q96E52 524 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 TRIM11Q96F44 468 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 DDX28Q9NUL7 540 aaKnown RBP6.68□□□□□ -1.34
SCN2A-202ENST00000375427 EPS15L1Q9UBC2 864 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 TRAK1Q9UPV9 953 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 HEATR1Q9H583 2144 aaKnown RBP6.68□□□□□ -1.34
SCN2A-202ENST00000375427 RIOK3O14730 519 aaKnown RBP6.68□□□□□ -1.34
SCN2A-202ENST00000375427 PRPF4BQ13523 1007 aaKnown RBP6.68□□□□□ -1.34
SCN2A-202ENST00000375427 STK38Q15208 465 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 DUSP27Q5VZP5 1158 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 TEX12Q9BXU0 123 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 OCA2Q04671 838 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 OTUD6AQ7L8S5 288 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 SRGAP1Q7Z6B7 1085 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 TRIM22Q8IYM9 498 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 CCDC94Q9BW85 323 aaPredicted RBP6.68□□□□□ -1.34
SCN2A-202ENST00000375427 DDIT3P35638 169 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 PPIDQ08752 370 aaKnown RBP6.68□□□□□ -1.34
SCN2A-202ENST00000375427 STX1AQ16623 288 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 RSBN1LQ6PCB5 846 aaPredicted RBP6.68□□□□□ -1.34
SCN2A-202ENST00000375427 TRAF7Q6Q0C0 670 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 UBL4BQ8N7F7 174 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 PARD3BQ8TEW8 1205 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 LRRC59Q96AG4 307 aaKnown RBP6.68□□□□□ -1.34
SCN2A-202ENST00000375427 LSM14BQ9BX40 385 aaKnown RBP6.68□□□□□ -1.34
SCN2A-202ENST00000375427 NINLQ9Y2I6 1382 aa6.68□□□□□ -1.34
SCN2A-202ENST00000375427 RASGRF2O14827 1237 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 ANGPT2O15123 496 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 PIP4K2BP78356 416 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 USP33Q8TEY7 942 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.67□□□□□ -1.34
SCN2A-202ENST00000375427 SEC63Q9UGP8 760 aaKnown RBP6.67□□□□□ -1.34
SCN2A-202ENST00000375427 U3KPZ7 1027 aaPredicted RBP6.67□□□□□ -1.34
SCN2A-202ENST00000375427 DAPK3O43293 454 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 SLC3A2P08195 630 aaKnown RBP6.67□□□□□ -1.34
SCN2A-202ENST00000375427 NBPF20Q3BBV1 942 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 CAPRIN2Q6IMN6 1127 aaKnown RBP6.67□□□□□ -1.34
SCN2A-202ENST00000375427 DTNBP1Q96EV8 351 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.67□□□□□ -1.34
SCN2A-202ENST00000375427 LGSNQ5TDP6 509 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 IFT20Q8IY31 132 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 CNTROBQ8N137 903 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 TUBGCP3Q96CW5 907 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 SFMBT1Q9UHJ3 866 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 USP25Q9UHP3 1055 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 GOLGA8IPA6NC78 632 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 ARHGAP42A6NI28 874 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 MCF2LO15068 1137 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 FAM13AO94988 1023 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 GATAD2AQ86YP4 633 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 CFAP36Q96G28 342 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 CCDC90BQ9GZT6 254 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 ZNF148Q9UQR1 794 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 SNAP25P60880 206 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 SCRN3Q0VDG4 424 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 PPP1R7Q15435 360 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 CSGALNACT2Q8N6G5 542 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 NDUFA5Q16718 116 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 CCDC144BQ3MJ40 725 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 CEP78Q5JTW2 689 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 ZNF449Q6P9G9 518 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 MAML3Q96JK9 1138 aa6.67□□□□□ -1.34
SCN2A-202ENST00000375427 DIAPH2O60879 1101 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 TBCAO75347 108 aaKnown RBP6.66□□□□□ -1.34
SCN2A-202ENST00000375427 ME1P48163 572 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 IGBP1P78318 339 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 UBE2Q1Q7Z7E8 422 aa6.66□□□□□ -1.34
SCN2A-202ENST00000375427 LRRC49Q8IUZ0 686 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms