RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 USHBP1Q8N6Y0 703 aa23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 KIAA1468Q9P260 1216 aa23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 ZRSR1Q15695 479 aaKnown RBP23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 BEND6Q5SZJ8 279 aaPredicted RBP23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 MKRN1Q9UHC7 482 aaKnown RBP23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 ANKARQ7Z5J8 1434 aa23.75■■□□□ 1.39
TMEFF1-201ENST00000374879 A0A1B0GVL5 298 aa23.75■■□□□ 1.39
TMEFF1-201ENST00000374879 DHX58Q96C10 678 aa23.75■■□□□ 1.39
TMEFF1-201ENST00000374879 OS9Q13438 667 aaPredicted RBP23.75■■□□□ 1.39
TMEFF1-201ENST00000374879 HDGFL1Q5TGJ6 251 aa23.75■■□□□ 1.39
TMEFF1-201ENST00000374879 DPF2Q92785 391 aa23.75■■□□□ 1.39
TMEFF1-201ENST00000374879 ECHDC1Q9NTX5 307 aa23.75■■□□□ 1.39
TMEFF1-201ENST00000374879 NPHP4O75161 1426 aaPredicted RBP23.75■■□□□ 1.39
TMEFF1-201ENST00000374879 EVI5LQ96CN4 794 aa23.74■■□□□ 1.39
TMEFF1-201ENST00000374879 AXDND1Q5T1B0 1012 aaPredicted RBP23.74■■□□□ 1.39
TMEFF1-201ENST00000374879 MCTP2Q6DN12 878 aa23.74■■□□□ 1.39
TMEFF1-201ENST00000374879 HDXQ7Z353 690 aa23.74■■□□□ 1.39
TMEFF1-201ENST00000374879 CCDC91Q7Z6B0 441 aa23.74■■□□□ 1.39
TMEFF1-201ENST00000374879 KIFC2Q96AC6 838 aa23.74■■□□□ 1.39
TMEFF1-201ENST00000374879 SUGCTQ9HAC7 445 aa23.74■■□□□ 1.39
TMEFF1-201ENST00000374879 MARF1Q9Y4F3 1742 aaKnown RBP23.73■■□□□ 1.39
TMEFF1-201ENST00000374879 CCDC172P0C7W6 258 aa23.73■■□□□ 1.39
TMEFF1-201ENST00000374879 SWT1Q5T5J6 900 aaKnown RBP23.73■■□□□ 1.39
TMEFF1-201ENST00000374879 WWC2Q6AWC2 1192 aa23.73■■□□□ 1.39
TMEFF1-201ENST00000374879 PHAXQ9H814 394 aaKnown RBP23.73■■□□□ 1.39
TMEFF1-201ENST00000374879 BABAM1Q9NWV8 329 aa23.73■■□□□ 1.39
TMEFF1-201ENST00000374879 NBPF7P0C2Y1 421 aaPredicted RBP23.73■■□□□ 1.39
TMEFF1-201ENST00000374879 MMS22LQ6ZRQ5 1243 aa23.73■■□□□ 1.39
TMEFF1-201ENST00000374879 CXorf56Q9H5V9 222 aa23.73■■□□□ 1.39
TMEFF1-201ENST00000374879 CACNA1FO60840 1977 aa23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 NDUFA8P51970 172 aa23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 SIL1Q9H173 461 aa23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 CEP83Q9Y592 693 aa23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 CPP00450 1065 aa23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 GSCP56915 257 aaPredicted RBP23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 FCHSD1Q86WN1 690 aa23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 TMEM139Q8IV31 216 aa23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 MRPS27Q92552 414 aaKnown RBP23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 PCDHA7Q9UN72 937 aa23.72■■□□□ 1.39
TMEFF1-201ENST00000374879 A0A0D9SFI3 127 aa23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 HSP90B1P14625 803 aaKnown RBP23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 CLASRPQ8N2M8 674 aaKnown RBP23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 HNRNPLLQ8WVV9 542 aaKnown RBP23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 HSD3B7Q9H2F3 369 aa23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 ANKZF1Q9H8Y5 726 aa23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 PHACTR2O75167 634 aa23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 UBASH3AP57075 661 aa23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 ISM2Q6H9L7 571 aa23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 BANK1Q8NDB2 785 aa23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 BICC1Q9H694 974 aaKnown RBP23.71■■□□□ 1.39
TMEFF1-201ENST00000374879 EFCAB13Q8IY85 973 aa23.7■■□□□ 1.38
TMEFF1-201ENST00000374879 PXDNLA1KZ92 1463 aa23.7■■□□□ 1.38
TMEFF1-201ENST00000374879 SCRN1Q12765 414 aa23.7■■□□□ 1.38
TMEFF1-201ENST00000374879 ERC1Q8IUD2 1116 aa23.7■■□□□ 1.38
TMEFF1-201ENST00000374879 CNNM3Q8NE01 707 aa23.7■■□□□ 1.38
TMEFF1-201ENST00000374879 ARHGAP6O43182 974 aa23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 NLRP12P59046 1061 aa23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 ZNF396Q96N95 335 aaPredicted RBP23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 PNKPQ96T60 521 aa23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 L1RE1Q9UN81 338 aa23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 NEDD4P46934 1319 aa23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 EIF3JO75822 258 aaKnown RBP23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 EIF2S2P20042 333 aaKnown RBP23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 HSP90AB4PQ58FF6 505 aa23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 Q6ZUG5 572 aa23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 TADA2BQ86TJ2 420 aa23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 ABCB6Q9NP58 842 aa23.69■■□□□ 1.38
TMEFF1-201ENST00000374879 TMEM232C9JQI7 657 aa23.68■■□□□ 1.38
TMEFF1-201ENST00000374879 CHMP4BP1P59074 171 aa23.68■■□□□ 1.38
TMEFF1-201ENST00000374879 MICALL1Q8N3F8 863 aa23.68■■□□□ 1.38
TMEFF1-201ENST00000374879 MYH15Q9Y2K3 1946 aa23.68■■□□□ 1.38
TMEFF1-201ENST00000374879 SERPINC1P01008 464 aa23.68■■□□□ 1.38
TMEFF1-201ENST00000374879 CFAP100Q494V2 611 aa23.68■■□□□ 1.38
TMEFF1-201ENST00000374879 NAA16Q6N069 864 aaPredicted RBP23.68■■□□□ 1.38
TMEFF1-201ENST00000374879 TOGARAM2Q6ZUX3 1019 aa23.68■■□□□ 1.38
TMEFF1-201ENST00000374879 PUF60Q9UHX1 559 aaKnown RBP23.68■■□□□ 1.38
TMEFF1-201ENST00000374879 SMARCC2Q8TAQ2 1214 aa23.67■■□□□ 1.38
TMEFF1-201ENST00000374879 CEP89Q96ST8 783 aa23.67■■□□□ 1.38
TMEFF1-201ENST00000374879 PPFIA3O75145 1194 aa23.67■■□□□ 1.38
TMEFF1-201ENST00000374879 GUCY1B3Q02153 619 aa23.67■■□□□ 1.38
TMEFF1-201ENST00000374879 SKIDA1Q1XH10 827 aa23.67■■□□□ 1.38
TMEFF1-201ENST00000374879 ILDR1Q86SU0 546 aaPredicted RBP23.67■■□□□ 1.38
TMEFF1-201ENST00000374879 CCDC12Q8WUD4 166 aaPredicted RBP23.67■■□□□ 1.38
TMEFF1-201ENST00000374879 CCDC102AQ96A19 550 aa23.67■■□□□ 1.38
TMEFF1-201ENST00000374879 N4BP2Q86UW6 1770 aaPredicted RBP23.67■■□□□ 1.38
TMEFF1-201ENST00000374879 SLC3A2P08195 630 aaKnown RBP23.66■■□□□ 1.38
TMEFF1-201ENST00000374879 TOP1P11387 765 aaKnown RBP23.66■■□□□ 1.38
TMEFF1-201ENST00000374879 USP5P45974 858 aa23.66■■□□□ 1.38
TMEFF1-201ENST00000374879 VSTM4Q8IW00 320 aa23.66■■□□□ 1.38
TMEFF1-201ENST00000374879 ADALQ6DHV7 355 aa23.66■■□□□ 1.38
TMEFF1-201ENST00000374879 ZNF589Q86UQ0 364 aaPredicted RBP23.66■■□□□ 1.38
TMEFF1-201ENST00000374879 GPATCH3Q96I76 525 aa23.66■■□□□ 1.38
TMEFF1-201ENST00000374879 LRRC2Q9BYS8 371 aa23.66■■□□□ 1.38
TMEFF1-201ENST00000374879 RAB21Q9UL25 225 aa23.66■■□□□ 1.38
TMEFF1-201ENST00000374879 PPFIA4O75335 1185 aa23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 KARSQ15046 597 aaKnown RBP23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 SRGAP1Q7Z6B7 1085 aa23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 IRX2Q9BZI1 471 aaPredicted RBP23.65■■□□□ 1.38
TMEFF1-201ENST00000374879 SNRKQ9NRH2 765 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms