RNA–Protein interactions for RNA: ENST00000374459.5

RASGEF1A-202, Transcript of RasGEF domain family member 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RASGEF1A, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-202ENST00000374459 HMGB1P09429 215 aaKnown RBP16.86■□□□□ 0.29
RASGEF1A-202ENST00000374459 TPD52L1Q16890 204 aaPredicted RBP16.86■□□□□ 0.29
RASGEF1A-202ENST00000374459 GOLIM4O00461 696 aa16.86■□□□□ 0.29
RASGEF1A-202ENST00000374459 CTAGE5O15320 804 aa16.86■□□□□ 0.29
RASGEF1A-202ENST00000374459 CCDC73Q6ZRK6 1079 aa16.86■□□□□ 0.29
RASGEF1A-202ENST00000374459 ATG3Q9NT62 314 aa16.86■□□□□ 0.29
RASGEF1A-202ENST00000374459 TMOD3Q9NYL9 352 aa16.86■□□□□ 0.29
RASGEF1A-202ENST00000374459 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
RASGEF1A-202ENST00000374459 A0A0G2JLW4 131 aa16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 SNW1Q13573 536 aaKnown RBP16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 ARID5BQ14865 1188 aa16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 NCOA5Q9HCD5 579 aaKnown RBP16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 ASAP1Q9ULH1 1129 aa16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 LMBR1LQ6UX01 489 aa16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 GUCY1B3Q02153 619 aa16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 LRRC8AQ8IWT6 810 aa16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 MRFAP1L1Q96HT8 127 aa16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 NEUROD6Q96NK8 337 aa16.85■□□□□ 0.29
RASGEF1A-202ENST00000374459 CICQ96RK0 1608 aaPredicted RBP16.84■□□□□ 0.29
RASGEF1A-202ENST00000374459 EXOSC10Q01780 885 aaKnown RBP16.84■□□□□ 0.29
RASGEF1A-202ENST00000374459 PAG1Q9NWQ8 432 aa16.84■□□□□ 0.29
RASGEF1A-202ENST00000374459 NWD2Q9ULI1 1742 aa16.84■□□□□ 0.29
RASGEF1A-202ENST00000374459 KINO60870 393 aaKnown RBP16.84■□□□□ 0.29
RASGEF1A-202ENST00000374459 DSCC1Q9BVC3 393 aa16.84■□□□□ 0.29
RASGEF1A-202ENST00000374459 BECN2A8MW95 431 aa16.83■□□□□ 0.29
RASGEF1A-202ENST00000374459 ZNF396Q96N95 335 aaPredicted RBP16.83■□□□□ 0.29
RASGEF1A-202ENST00000374459 ISCA1Q9BUE6 129 aa16.83■□□□□ 0.29
RASGEF1A-202ENST00000374459 AGXT2Q9BYV1 514 aa16.83■□□□□ 0.29
RASGEF1A-202ENST00000374459 HELLSQ9NRZ9 838 aa16.83■□□□□ 0.29
RASGEF1A-202ENST00000374459 RREB1Q92766 1687 aa16.83■□□□□ 0.29
RASGEF1A-202ENST00000374459 SALL1Q9NSC2 1324 aa16.83■□□□□ 0.29
RASGEF1A-202ENST00000374459 SLC20A2Q08357 652 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 FSIP1Q8NA03 581 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 ENGASEQ8NFI3 743 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 CWC25Q9NXE8 425 aaPredicted RBP16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 E7EWF7 191 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 FAM160A1Q05DH4 1040 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 CHST3Q7LGC8 479 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 DHX40Q8IX18 779 aaKnown RBP16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 CCDC191Q8NCU4 936 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 CCDC112Q8NEF3 446 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 SLC4A9Q96Q91 983 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 PAXBP1Q9Y5B6 917 aa16.83■□□□□ 0.28
RASGEF1A-202ENST00000374459 USP27XA6NNY8 438 aa16.82■□□□□ 0.28
RASGEF1A-202ENST00000374459 ME1P48163 572 aa16.82■□□□□ 0.28
RASGEF1A-202ENST00000374459 ILDR1Q86SU0 546 aaPredicted RBP16.82■□□□□ 0.28
RASGEF1A-202ENST00000374459 ERCC4Q92889 916 aaPredicted RBP16.82■□□□□ 0.28
RASGEF1A-202ENST00000374459 NUP98P52948 1817 aa16.82■□□□□ 0.28
RASGEF1A-202ENST00000374459 SYCP1Q15431 976 aa16.82■□□□□ 0.28
RASGEF1A-202ENST00000374459 ZMYM1Q5SVZ6 1142 aa16.82■□□□□ 0.28
RASGEF1A-202ENST00000374459 ZNF592Q92610 1267 aa16.82■□□□□ 0.28
RASGEF1A-202ENST00000374459 ANO10Q9NW15 660 aa16.82■□□□□ 0.28
RASGEF1A-202ENST00000374459 HSPD1P10809 573 aaKnown RBP16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 TIMM10P62072 90 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 NAA30Q147X3 362 aaPredicted RBP16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 ATG9AQ7Z3C6 839 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 DNAJC10Q8IXB1 793 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 PLCD3Q8N3E9 789 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 IRX5P78411 483 aaPredicted RBP16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 FBXW7Q969H0 707 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 ZBTB3Q9H5J0 574 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 MAST3O60307 1309 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 CARMIL3Q8ND23 1372 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 ATL3Q6DD88 541 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 FILIP1Q7Z7B0 1213 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 TIGD1Q96MW7 591 aa16.81■□□□□ 0.28
RASGEF1A-202ENST00000374459 ZBTB22O15209 634 aa16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 NEMFO60524 1076 aa16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 RBM6P78332 1123 aaKnown RBP16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 AOPEPQ8N6M6 819 aa16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 MYH3P11055 1940 aa16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 CCDC69A6NI79 296 aa16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 SKILP12757 684 aa16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 CEP57L1Q8IYX8 460 aa16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 TRIM28Q13263 835 aaKnown RBP16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 TEX13AQ9BXU3 409 aaPredicted RBP16.8■□□□□ 0.28
RASGEF1A-202ENST00000374459 ZNF274Q96GC6 653 aaPredicted RBP16.79■□□□□ 0.28
RASGEF1A-202ENST00000374459 CCZ1BP86790 482 aa16.79■□□□□ 0.28
RASGEF1A-202ENST00000374459 CCZ1P86791 482 aaPredicted RBP16.79■□□□□ 0.28
RASGEF1A-202ENST00000374459 TTLL5Q6EMB2 1281 aa16.79■□□□□ 0.28
RASGEF1A-202ENST00000374459 PCDHA7Q9UN72 937 aa16.79■□□□□ 0.28
RASGEF1A-202ENST00000374459 FDPSP14324 419 aaKnown RBP16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 TCIRG1Q13488 830 aa16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 MRPS27Q92552 414 aaKnown RBP16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 FMR1NBQ8N0W7 255 aaPredicted RBP16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 M0R2C6 588 aa16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 RNF113AO15541 343 aaKnown RBP16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 LRRC24Q50LG9 513 aa16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 GPR108Q9NPR9 543 aa16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
RASGEF1A-202ENST00000374459 SPATA31A1Q5TZJ5 1347 aa16.77■□□□□ 0.28
RASGEF1A-202ENST00000374459 A0A1B0GVL5 298 aa16.77■□□□□ 0.28
RASGEF1A-202ENST00000374459 CYP19A1P11511 503 aaPredicted RBP16.77■□□□□ 0.28
RASGEF1A-202ENST00000374459 PTPN14Q15678 1187 aa16.77■□□□□ 0.28
RASGEF1A-202ENST00000374459 OTUD7BQ6GQQ9 843 aa16.77■□□□□ 0.28
RASGEF1A-202ENST00000374459 NYAP1Q6ZVC0 841 aa16.77■□□□□ 0.28
RASGEF1A-202ENST00000374459 SPEF2Q9C093 1822 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms