RNA–Protein interactions for RNA: ENST00000374459.5

RASGEF1A-202, Transcript of RasGEF domain family member 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RASGEF1A, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-202ENST00000374459 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.46■□□□□ 0.073e-6■■■■■ 88.9
RASGEF1A-202ENST00000374459 SF3B1O75533 1304 aaKnown RBP eCLIP14.77□□□□□ -0.054e-7■■■■■ 86.2
RASGEF1A-202ENST00000374459 RBM15Q96T37 977 aaKnown RBP eCLIP15.25■□□□□ 0.036e-23■■■■■ 84
RASGEF1A-202ENST00000374459 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.71■□□□□ 0.111e-6■■■■■ 56.2
RASGEF1A-202ENST00000374459 TIA1P31483 386 aaKnown RBP eCLIP13.79□□□□□ -0.23e-8■■■■□ 26.7
RASGEF1A-202ENST00000374459 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.74□□□□□ -0.217e-8■■■■□ 25.4
RASGEF1A-202ENST00000374459 GTF2F1P35269 517 aaKnown RBP eCLIP17.07■□□□□ 0.321e-6■■■■□ 24.2
RASGEF1A-202ENST00000374459 AQRO60306 1485 aaKnown RBP eCLIP21.08■□□□□ 0.966e-7■■■■□ 21.4
RASGEF1A-202ENST00000374459 SF3B4Q15427 424 aaKnown RBP eCLIP14.17□□□□□ -0.146e-7■■■■□ 20.1
RASGEF1A-202ENST00000374459 ZNF622Q969S3 477 aaKnown RBP eCLIP16.21■□□□□ 0.193e-6■■□□□ 13.5
RASGEF1A-202ENST00000374459 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.7■□□□□ 0.14e-6■■□□□ 13.2
RASGEF1A-202ENST00000374459 UPF1Q92900 1129 aaKnown RBP eCLIP15.11■□□□□ 0.018e-7■■□□□ 11.6
Retrieved 12 of 12 RNA–protein pairs in 4 ms