RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 FSD1Q9BTV5 496 aa17.62■□□□□ 0.41
RCC1-201ENST00000373831 NMRK2Q9NPI5 230 aa17.62■□□□□ 0.41
RCC1-201ENST00000373831 ZNF646O15015 1829 aaPredicted RBP17.62■□□□□ 0.41
RCC1-201ENST00000373831 VPS37DQ86XT2 251 aa17.62■□□□□ 0.41
RCC1-201ENST00000373831 RTFDC1Q9BY42 306 aaPredicted RBP17.62■□□□□ 0.41
RCC1-201ENST00000373831 IL25Q9H293 177 aa17.62■□□□□ 0.41
RCC1-201ENST00000373831 TSHZ2Q9NRE2 1034 aa17.62■□□□□ 0.41
RCC1-201ENST00000373831 ZBTB22O15209 634 aa17.61■□□□□ 0.41
RCC1-201ENST00000373831 TOMM70O94826 608 aa17.61■□□□□ 0.41
RCC1-201ENST00000373831 TMX4Q9H1E5 349 aaPredicted RBP17.61■□□□□ 0.41
RCC1-201ENST00000373831 PIH1D3Q9NQM4 214 aaKnown RBP17.61■□□□□ 0.41
RCC1-201ENST00000373831 GNL3LQ9NVN8 582 aaKnown RBP17.61■□□□□ 0.41
RCC1-201ENST00000373831 SCN9AQ15858 1988 aa17.61■□□□□ 0.41
RCC1-201ENST00000373831 CCDC88AQ3V6T2 1871 aa17.6■□□□□ 0.41
RCC1-201ENST00000373831 RFX7Q2KHR2 1363 aa17.6■□□□□ 0.41
RCC1-201ENST00000373831 CC2D2BQ6DHV5 1058 aa17.6■□□□□ 0.41
RCC1-201ENST00000373831 TDRD7Q8NHU6 1098 aaKnown RBP17.6■□□□□ 0.41
RCC1-201ENST00000373831 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
RCC1-201ENST00000373831 SEMA3EO15041 775 aa17.59■□□□□ 0.41
RCC1-201ENST00000373831 ZNF804AQ7Z570 1209 aa17.59■□□□□ 0.41
RCC1-201ENST00000373831 RNF181Q9P0P0 153 aa17.59■□□□□ 0.41
RCC1-201ENST00000373831 IL1R1P14778 569 aa17.58■□□□□ 0.41
RCC1-201ENST00000373831 SLFNL1Q499Z3 407 aa17.58■□□□□ 0.41
RCC1-201ENST00000373831 CCDC93Q567U6 631 aa17.58■□□□□ 0.41
RCC1-201ENST00000373831 FAM227BQ96M60 508 aa17.58■□□□□ 0.41
RCC1-201ENST00000373831 ESYT1Q9BSJ8 1104 aa17.58■□□□□ 0.41
RCC1-201ENST00000373831 CD209Q9NNX6 404 aa17.58■□□□□ 0.41
RCC1-201ENST00000373831 DENND2AQ9ULE3 1009 aa17.58■□□□□ 0.41
RCC1-201ENST00000373831 PDS5AQ29RF7 1337 aaKnown RBP17.58■□□□□ 0.41
RCC1-201ENST00000373831 PSME4Q14997 1843 aa17.58■□□□□ 0.4
RCC1-201ENST00000373831 NMIQ13287 307 aaPredicted RBP17.57■□□□□ 0.4
RCC1-201ENST00000373831 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
RCC1-201ENST00000373831 DIAPH3Q9NSV4 1193 aa17.57■□□□□ 0.4
RCC1-201ENST00000373831 MAST2Q6P0Q8 1798 aa17.57■□□□□ 0.4
RCC1-201ENST00000373831 A0A0D9SFI3 127 aa17.57■□□□□ 0.4
RCC1-201ENST00000373831 TTF1Q15361 905 aaPredicted RBP17.57■□□□□ 0.4
RCC1-201ENST00000373831 CASC1Q6TDU7 716 aa17.57■□□□□ 0.4
RCC1-201ENST00000373831 CWC27Q6UX04 472 aaKnown RBP17.57■□□□□ 0.4
RCC1-201ENST00000373831 COL4A5P29400 1685 aa17.56■□□□□ 0.4
RCC1-201ENST00000373831 APLP1P51693 650 aa17.56■□□□□ 0.4
RCC1-201ENST00000373831 MFAP1P55081 439 aaKnown RBP17.56■□□□□ 0.4
RCC1-201ENST00000373831 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
RCC1-201ENST00000373831 RTKN2Q8IZC4 609 aa17.56■□□□□ 0.4
RCC1-201ENST00000373831 EYA3Q99504 573 aa17.56■□□□□ 0.4
RCC1-201ENST00000373831 ZC3H12CQ9C0D7 883 aaKnown RBP17.56■□□□□ 0.4
RCC1-201ENST00000373831 JAG2Q9Y219 1238 aa17.56■□□□□ 0.4
RCC1-201ENST00000373831 HIP1O00291 1037 aa17.55■□□□□ 0.4
RCC1-201ENST00000373831 SGSM2O43147 1006 aa17.55■□□□□ 0.4
RCC1-201ENST00000373831 RASSF7Q02833 373 aa17.55■□□□□ 0.4
RCC1-201ENST00000373831 TICAM2Q86XR7 235 aa17.55■□□□□ 0.4
RCC1-201ENST00000373831 PSMD1Q99460 953 aa17.55■□□□□ 0.4
RCC1-201ENST00000373831 COA1Q9GZY4 146 aa17.55■□□□□ 0.4
RCC1-201ENST00000373831 RNF113AO15541 343 aaKnown RBP17.54■□□□□ 0.4
RCC1-201ENST00000373831 FRAT2O75474 233 aaPredicted RBP17.54■□□□□ 0.4
RCC1-201ENST00000373831 IDH1O75874 414 aaKnown RBP17.54■□□□□ 0.4
RCC1-201ENST00000373831 CHAF1AQ13111 956 aaPredicted RBP17.54■□□□□ 0.4
RCC1-201ENST00000373831 DOK7Q18PE1 504 aa17.54■□□□□ 0.4
RCC1-201ENST00000373831 ADD2P35612 726 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 AOC3Q16853 763 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 ZMYM1Q5SVZ6 1142 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 SOGA3Q5TF21 947 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 IFFO2Q5TF58 517 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 SEC62Q99442 399 aaKnown RBP17.53■□□□□ 0.4
RCC1-201ENST00000373831 MYH2Q9UKX2 1941 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 TCRBV5S4A2TA0A5A2 114 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 PDE6AP16499 860 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 ZNF589Q86UQ0 364 aaPredicted RBP17.53■□□□□ 0.4
RCC1-201ENST00000373831 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 RBM46Q8TBY0 533 aaKnown RBP17.53■□□□□ 0.4
RCC1-201ENST00000373831 ZNF384Q8TF68 577 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 RRAGCQ9HB90 399 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 ABCF2Q9UG63 623 aa17.53■□□□□ 0.4
RCC1-201ENST00000373831 FAM205AQ6ZU69 1335 aa17.52■□□□□ 0.4
RCC1-201ENST00000373831 SALL1Q9NSC2 1324 aa17.52■□□□□ 0.4
RCC1-201ENST00000373831 NFKBIEO00221 500 aa17.52■□□□□ 0.39
RCC1-201ENST00000373831 GRIK5Q16478 980 aa17.52■□□□□ 0.39
RCC1-201ENST00000373831 SLC9C2Q5TAH2 1124 aa17.52■□□□□ 0.39
RCC1-201ENST00000373831 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.39
RCC1-201ENST00000373831 OSBP2Q969R2 916 aa17.52■□□□□ 0.39
RCC1-201ENST00000373831 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.39
RCC1-201ENST00000373831 DBNDD1Q9H9R9 158 aa17.52■□□□□ 0.39
RCC1-201ENST00000373831 ZNF277Q9NRM2 450 aaPredicted RBP17.52■□□□□ 0.39
RCC1-201ENST00000373831 RAD50Q92878 1312 aa17.51■□□□□ 0.39
RCC1-201ENST00000373831 SBF1O95248 1867 aa17.51■□□□□ 0.39
RCC1-201ENST00000373831 ZFYP08048 801 aaPredicted RBP17.51■□□□□ 0.39
RCC1-201ENST00000373831 PRELPP51888 382 aa17.51■□□□□ 0.39
RCC1-201ENST00000373831 KCNQ5Q9NR82 932 aa17.51■□□□□ 0.39
RCC1-201ENST00000373831 LRP2BPQ9P2M1 347 aa17.51■□□□□ 0.39
RCC1-201ENST00000373831 MAST3O60307 1309 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 ZNF532Q9HCE3 1301 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 M0R2C6 588 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 PPIP5K2O43314 1243 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 ECE2O60344 883 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 PRDX5P30044 214 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 MAP3K12Q12852 859 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 CCDC129Q6ZRS4 1044 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 DNAJC5GQ8N7S2 189 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 MAGEB6Q8N7X4 407 aa17.5■□□□□ 0.39
RCC1-201ENST00000373831 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms