RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TPCN1Q9ULQ1 816 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 RXRAP19793 462 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 TMEM266Q2M3C6 531 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 ANO1Q5XXA6 986 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 TRIM75PA6NK02 468 aa19.89■□□□□ 0.78
PTPRU-202ENST00000373779 TDRD12Q587J7 1177 aaKnown RBP19.89■□□□□ 0.78
PTPRU-202ENST00000373779 IMPACTQ9P2X3 320 aa19.89■□□□□ 0.77
PTPRU-202ENST00000373779 TSPY2A6NKD2 308 aa19.89■□□□□ 0.77
PTPRU-202ENST00000373779 AMPD3Q01432 767 aa19.89■□□□□ 0.77
PTPRU-202ENST00000373779 KRI1Q8N9T8 703 aaKnown RBP19.89■□□□□ 0.77
PTPRU-202ENST00000373779 CDC5LQ99459 802 aaKnown RBP19.89■□□□□ 0.77
PTPRU-202ENST00000373779 SEPT11Q9NVA2 429 aaKnown RBP19.89■□□□□ 0.77
PTPRU-202ENST00000373779 CTAGE9A4FU28 777 aa19.89■□□□□ 0.77
PTPRU-202ENST00000373779 IFIT1BQ5T764 474 aaKnown RBP19.89■□□□□ 0.77
PTPRU-202ENST00000373779 KAT14Q9H8E8 782 aa19.89■□□□□ 0.77
PTPRU-202ENST00000373779 EFCAB6Q5THR3 1501 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 CDK12Q9NYV4 1490 aaPredicted RBP19.88■□□□□ 0.77
PTPRU-202ENST00000373779 A0A1B0GUL7 405 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 PDE4BQ07343 736 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 MCM6Q14566 821 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 KARSQ15046 597 aaKnown RBP19.88■□□□□ 0.77
PTPRU-202ENST00000373779 TSC1Q92574 1164 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 JADE2Q9NQC1 790 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 EYA2O00167 538 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 BEND3Q5T5X7 828 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 GCKRQ14397 625 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 PLBD2Q8NHP8 589 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 CYP7A1P22680 504 aa19.88■□□□□ 0.77
PTPRU-202ENST00000373779 A0A0D9SFI3 127 aa19.87■□□□□ 0.77
PTPRU-202ENST00000373779 CALML4Q96GE6 196 aa19.87■□□□□ 0.77
PTPRU-202ENST00000373779 BAG1Q99933 345 aaPredicted RBP19.87■□□□□ 0.77
PTPRU-202ENST00000373779 NDUFB9Q9Y6M9 179 aa19.87■□□□□ 0.77
PTPRU-202ENST00000373779 CKAP4Q07065 602 aaKnown RBP19.87■□□□□ 0.77
PTPRU-202ENST00000373779 NBPF6Q5VWK0 638 aa19.87■□□□□ 0.77
PTPRU-202ENST00000373779 RASEFQ8IZ41 740 aa19.87■□□□□ 0.77
PTPRU-202ENST00000373779 NBPF4Q96M43 638 aa19.87■□□□□ 0.77
PTPRU-202ENST00000373779 CDC42BPBQ9Y5S2 1711 aa19.87■□□□□ 0.77
PTPRU-202ENST00000373779 KDRP35968 1356 aa19.87■□□□□ 0.77
PTPRU-202ENST00000373779 ATP5JP18859 108 aa19.86■□□□□ 0.77
PTPRU-202ENST00000373779 TRIM21P19474 475 aaKnown RBP19.86■□□□□ 0.77
PTPRU-202ENST00000373779 STAT6P42226 847 aa19.86■□□□□ 0.77
PTPRU-202ENST00000373779 DNA2P51530 1060 aa19.86■□□□□ 0.77
PTPRU-202ENST00000373779 FANCCQ00597 558 aa19.86■□□□□ 0.77
PTPRU-202ENST00000373779 FAM107BQ9H098 131 aa19.86■□□□□ 0.77
PTPRU-202ENST00000373779 NR1I2O75469 434 aa19.86■□□□□ 0.77
PTPRU-202ENST00000373779 TTC6Q86TZ1 520 aa19.86■□□□□ 0.77
PTPRU-202ENST00000373779 LZTFL1Q9NQ48 299 aa19.86■□□□□ 0.77
PTPRU-202ENST00000373779 OTUD7BQ6GQQ9 843 aa19.86■□□□□ 0.77
PTPRU-202ENST00000373779 RNF216Q9NWF9 866 aaPredicted RBP19.86■□□□□ 0.77
PTPRU-202ENST00000373779 CYLC1P35663 651 aaPredicted RBP19.85■□□□□ 0.77
PTPRU-202ENST00000373779 NLRP12P59046 1061 aa19.85■□□□□ 0.77
PTPRU-202ENST00000373779 ELF2Q15723 593 aa19.85■□□□□ 0.77
PTPRU-202ENST00000373779 CCDC152Q4G0S7 254 aa19.85■□□□□ 0.77
PTPRU-202ENST00000373779 STX17P56962 302 aa19.85■□□□□ 0.77
PTPRU-202ENST00000373779 NUTM2AQ8IVF1 878 aaPredicted RBP19.85■□□□□ 0.77
PTPRU-202ENST00000373779 EAF2Q96CJ1 260 aaPredicted RBP19.85■□□□□ 0.77
PTPRU-202ENST00000373779 GNAT2P19087 354 aa19.85■□□□□ 0.77
PTPRU-202ENST00000373779 PIP4K2BP78356 416 aa19.85■□□□□ 0.77
PTPRU-202ENST00000373779 RTL9Q8NET4 1388 aa19.85■□□□□ 0.77
PTPRU-202ENST00000373779 ZNF202O95125 648 aa19.84■□□□□ 0.77
PTPRU-202ENST00000373779 EVCP57679 992 aa19.84■□□□□ 0.77
PTPRU-202ENST00000373779 MEX3CQ5U5Q3 659 aaKnown RBP19.84■□□□□ 0.77
PTPRU-202ENST00000373779 EXOC1Q9NV70 894 aa19.84■□□□□ 0.77
PTPRU-202ENST00000373779 CPSF1Q10570 1443 aaKnown RBP19.84■□□□□ 0.77
PTPRU-202ENST00000373779 EDC3Q96F86 508 aaKnown RBP19.84■□□□□ 0.77
PTPRU-202ENST00000373779 TUBB4BP68371 445 aa19.84■□□□□ 0.77
PTPRU-202ENST00000373779 ENOX2Q16206 610 aaKnown RBP19.84■□□□□ 0.77
PTPRU-202ENST00000373779 MLH3Q9UHC1 1453 aa19.84■□□□□ 0.77
PTPRU-202ENST00000373779 KRT2P35908 639 aa19.84■□□□□ 0.77
PTPRU-202ENST00000373779 NAA15Q9BXJ9 866 aaKnown RBP19.84■□□□□ 0.77
PTPRU-202ENST00000373779 CRNKL1Q9BZJ0 848 aaKnown RBP19.84■□□□□ 0.77
PTPRU-202ENST00000373779 CCDC178Q5BJE1 867 aa19.83■□□□□ 0.77
PTPRU-202ENST00000373779 KCNQ3O43525 872 aa19.83■□□□□ 0.77
PTPRU-202ENST00000373779 IDEP14735 1019 aa19.83■□□□□ 0.77
PTPRU-202ENST00000373779 ADCK5Q3MIX3 580 aa19.83■□□□□ 0.77
PTPRU-202ENST00000373779 ZNF569Q5MCW4 686 aa19.83■□□□□ 0.77
PTPRU-202ENST00000373779 VPS36Q86VN1 386 aa19.83■□□□□ 0.77
PTPRU-202ENST00000373779 MAGEB6Q8N7X4 407 aa19.83■□□□□ 0.77
PTPRU-202ENST00000373779 DSCC1Q9BVC3 393 aa19.83■□□□□ 0.77
PTPRU-202ENST00000373779 TMEM2Q9UHN6 1383 aa19.83■□□□□ 0.77
PTPRU-202ENST00000373779 KIF20AO95235 890 aa19.83■□□□□ 0.76
PTPRU-202ENST00000373779 ZNF76P36508 570 aa19.83■□□□□ 0.76
PTPRU-202ENST00000373779 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.83■□□□□ 0.76
PTPRU-202ENST00000373779 PPP1R12BO60237 982 aaPredicted RBP19.83■□□□□ 0.76
PTPRU-202ENST00000373779 ANKIB1Q9P2G1 1089 aa19.83■□□□□ 0.76
PTPRU-202ENST00000373779 PUF60Q9UHX1 559 aaKnown RBP19.83■□□□□ 0.76
PTPRU-202ENST00000373779 KCNH3Q9ULD8 1083 aa19.83■□□□□ 0.76
PTPRU-202ENST00000373779 NSFL1CQ9UNZ2 370 aaKnown RBP19.83■□□□□ 0.76
PTPRU-202ENST00000373779 LRMPQ12912 555 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 APPBP2Q92624 585 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 SLC52A2Q9HAB3 445 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 YEATS2Q9ULM3 1422 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 ERBB4Q15303 1308 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 EXOC5O00471 708 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 GABPB1Q06547 395 aaPredicted RBP19.82■□□□□ 0.76
PTPRU-202ENST00000373779 NEURL1BA8MQ27 555 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 AKR1B15C9JRZ8 316 aaPredicted RBP19.82■□□□□ 0.76
PTPRU-202ENST00000373779 IVLP07476 585 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 CCDC40Q4G0X9 1142 aa19.82■□□□□ 0.76
PTPRU-202ENST00000373779 CADPS2Q86UW7 1296 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms