RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 E7EWF7 191 aa29.68■■■□□ 2.34
CTSA-203ENST00000372459 FOXP2O15409 715 aa29.68■■■□□ 2.34
CTSA-203ENST00000372459 NFIXQ14938 502 aa29.68■■■□□ 2.34
CTSA-203ENST00000372459 IMMTQ16891 758 aaKnown RBP29.68■■■□□ 2.34
CTSA-203ENST00000372459 DHX32Q7L7V1 743 aaKnown RBP29.68■■■□□ 2.34
CTSA-203ENST00000372459 WWC3Q9ULE0 1092 aa29.68■■■□□ 2.34
CTSA-203ENST00000372459 DOCK2Q92608 1830 aa29.68■■■□□ 2.34
CTSA-203ENST00000372459 HMGB2P26583 209 aaKnown RBP29.67■■■□□ 2.34
CTSA-203ENST00000372459 ZNF772Q68DY9 489 aaPredicted RBP29.67■■■□□ 2.34
CTSA-203ENST00000372459 Q6ZUG5 572 aa29.67■■■□□ 2.34
CTSA-203ENST00000372459 TCRBV5S4A2TA0A5A2 114 aa29.66■■■□□ 2.34
CTSA-203ENST00000372459 RBM6P78332 1123 aaKnown RBP29.66■■■□□ 2.34
CTSA-203ENST00000372459 ST3GAL1Q11201 340 aa29.66■■■□□ 2.34
CTSA-203ENST00000372459 FOXD4L5Q5VV16 416 aaPredicted RBP29.66■■■□□ 2.34
CTSA-203ENST00000372459 CCDC24Q8N4L8 307 aa29.66■■■□□ 2.34
CTSA-203ENST00000372459 FOXD4L4Q8WXT5 416 aaPredicted RBP29.66■■■□□ 2.34
CTSA-203ENST00000372459 GNL3LQ9NVN8 582 aaKnown RBP29.66■■■□□ 2.34
CTSA-203ENST00000372459 LAMA4Q16363 1823 aa29.66■■■□□ 2.34
CTSA-203ENST00000372459 FGAP02671 866 aa29.66■■■□□ 2.34
CTSA-203ENST00000372459 L1TD1Q5T7N2 865 aaKnown RBP29.66■■■□□ 2.34
CTSA-203ENST00000372459 TTLL5Q6EMB2 1281 aa29.66■■■□□ 2.34
CTSA-203ENST00000372459 NECAB1Q8N987 351 aa29.66■■■□□ 2.34
CTSA-203ENST00000372459 ZNF804BA4D1E1 1349 aa29.66■■■□□ 2.34
CTSA-203ENST00000372459 GJB2P29033 226 aa29.65■■■□□ 2.34
CTSA-203ENST00000372459 CAVIN4Q5BKX8 364 aa29.64■■■□□ 2.34
CTSA-203ENST00000372459 A0A0G2JLW4 131 aa29.64■■■□□ 2.34
CTSA-203ENST00000372459 CNBD1Q8NA66 436 aa29.64■■■□□ 2.34
CTSA-203ENST00000372459 FGD1P98174 961 aa29.63■■■□□ 2.33
CTSA-203ENST00000372459 ANKRD2Q9GZV1 360 aa29.63■■■□□ 2.33
CTSA-203ENST00000372459 TM4SF1P30408 202 aa29.63■■■□□ 2.33
CTSA-203ENST00000372459 MAGEB6Q8N7X4 407 aa29.63■■■□□ 2.33
CTSA-203ENST00000372459 AIDAQ96BJ3 306 aa29.63■■■□□ 2.33
CTSA-203ENST00000372459 STX6O43752 255 aa29.62■■■□□ 2.33
CTSA-203ENST00000372459 SYT1P21579 422 aa29.62■■■□□ 2.33
CTSA-203ENST00000372459 GYG1P46976 350 aa29.62■■■□□ 2.33
CTSA-203ENST00000372459 EXOSC10Q01780 885 aaKnown RBP29.62■■■□□ 2.33
CTSA-203ENST00000372459 TNRC6CQ9HCJ0 1690 aaKnown RBP29.61■■■□□ 2.33
CTSA-203ENST00000372459 GYS1P13807 737 aa29.61■■■□□ 2.33
CTSA-203ENST00000372459 VPS37DQ86XT2 251 aa29.61■■■□□ 2.33
CTSA-203ENST00000372459 GZF1Q9H116 711 aaPredicted RBP29.61■■■□□ 2.33
CTSA-203ENST00000372459 ZNF213O14771 459 aa29.6■■■□□ 2.33
CTSA-203ENST00000372459 BRF1Q92994 677 aa29.6■■■□□ 2.33
CTSA-203ENST00000372459 LMBRD1Q9NUN5 540 aa29.6■■■□□ 2.33
CTSA-203ENST00000372459 ZSCAN22P10073 491 aaPredicted RBP29.59■■■□□ 2.33
CTSA-203ENST00000372459 PDIA4P13667 645 aaKnown RBP29.59■■■□□ 2.33
CTSA-203ENST00000372459 HAND2P61296 217 aa29.59■■■□□ 2.33
CTSA-203ENST00000372459 TXNRD1Q16881 649 aa29.59■■■□□ 2.33
CTSA-203ENST00000372459 STRBPQ96SI9 672 aaKnown RBP29.59■■■□□ 2.33
CTSA-203ENST00000372459 LRP2BPQ9P2M1 347 aa29.59■■■□□ 2.33
CTSA-203ENST00000372459 LRRC2Q9BYS8 371 aa29.59■■■□□ 2.33
CTSA-203ENST00000372459 AGXT2Q9BYV1 514 aa29.59■■■□□ 2.33
CTSA-203ENST00000372459 STK3Q13188 491 aa29.58■■■□□ 2.33
CTSA-203ENST00000372459 GTF3C6Q969F1 213 aa29.58■■■□□ 2.33
CTSA-203ENST00000372459 EP400Q96L91 3159 aa29.57■■■□□ 2.32
CTSA-203ENST00000372459 APPP05067 770 aa29.57■■■□□ 2.32
CTSA-203ENST00000372459 KLHL40Q2TBA0 621 aa29.57■■■□□ 2.32
CTSA-203ENST00000372459 FAM84BQ96KN1 310 aaPredicted RBP29.57■■■□□ 2.32
CTSA-203ENST00000372459 DENND2AQ9ULE3 1009 aa29.57■■■□□ 2.32
CTSA-203ENST00000372459 IQSEC3Q9UPP2 1182 aaPredicted RBP29.57■■■□□ 2.32
CTSA-203ENST00000372459 DDX49Q9Y6V7 483 aaKnown RBP29.57■■■□□ 2.32
CTSA-203ENST00000372459 WTIPA6NIX2 430 aaPredicted RBP29.57■■■□□ 2.32
CTSA-203ENST00000372459 PRR5LQ6MZQ0 368 aa29.57■■■□□ 2.32
CTSA-203ENST00000372459 SEMA3EO15041 775 aa29.55■■■□□ 2.32
CTSA-203ENST00000372459 PRPF40AO75400 957 aaKnown RBP29.55■■■□□ 2.32
CTSA-203ENST00000372459 GRAPQ13588 217 aa29.55■■■□□ 2.32
CTSA-203ENST00000372459 FBXO33Q7Z6M2 555 aa29.55■■■□□ 2.32
CTSA-203ENST00000372459 FBXL16Q8N461 479 aa29.55■■■□□ 2.32
CTSA-203ENST00000372459 GRAPLQ8TC17 118 aaPredicted RBP29.55■■■□□ 2.32
CTSA-203ENST00000372459 MBD4O95243 580 aa29.55■■■□□ 2.32
CTSA-203ENST00000372459 PDCP20941 246 aa29.55■■■□□ 2.32
CTSA-203ENST00000372459 ST5P78524 1137 aa29.55■■■□□ 2.32
CTSA-203ENST00000372459 PROM2Q8N271 834 aa29.55■■■□□ 2.32
CTSA-203ENST00000372459 NCOA7Q8NI08 942 aa29.55■■■□□ 2.32
CTSA-203ENST00000372459 PATL2C9JE40 543 aaKnown RBP29.54■■■□□ 2.32
CTSA-203ENST00000372459 ALX1Q15699 326 aa29.54■■■□□ 2.32
CTSA-203ENST00000372459 ZMYM6O95789 1325 aa29.54■■■□□ 2.32
CTSA-203ENST00000372459 CHAMP1Q96JM3 812 aa29.53■■■□□ 2.32
CTSA-203ENST00000372459 RTN4Q9NQC3 1192 aaKnown RBP29.53■■■□□ 2.32
CTSA-203ENST00000372459 ATP6V1DQ9Y5K8 247 aa29.53■■■□□ 2.32
CTSA-203ENST00000372459 F13A1P00488 732 aa29.53■■■□□ 2.32
CTSA-203ENST00000372459 SERPINB2P05120 415 aa29.53■■■□□ 2.32
CTSA-203ENST00000372459 GNAT2P19087 354 aa29.53■■■□□ 2.32
CTSA-203ENST00000372459 RALYLQ86SE5 291 aaKnown RBP29.53■■■□□ 2.32
CTSA-203ENST00000372459 ABCF2Q9UG63 623 aa29.53■■■□□ 2.32
CTSA-203ENST00000372459 COL1A1P02452 1464 aaPredicted RBP29.53■■■□□ 2.32
CTSA-203ENST00000372459 FSD2A1L4K1 749 aa29.52■■■□□ 2.32
CTSA-203ENST00000372459 PFKFB2O60825 505 aa29.52■■■□□ 2.32
CTSA-203ENST00000372459 MCM5P33992 734 aa29.52■■■□□ 2.32
CTSA-203ENST00000372459 LARP1BQ659C4 914 aaKnown RBP29.52■■■□□ 2.32
CTSA-203ENST00000372459 MTMR6Q9Y217 621 aa29.52■■■□□ 2.32
CTSA-203ENST00000372459 PNPLA7Q6ZV29 1317 aa29.52■■■□□ 2.32
CTSA-203ENST00000372459 PLSCR1O15162 318 aa29.52■■■□□ 2.32
CTSA-203ENST00000372459 APOBRQ0VD83 1088 aa29.52■■■□□ 2.32
CTSA-203ENST00000372459 MB21D2Q8IYB1 491 aaPredicted RBP29.52■■■□□ 2.32
CTSA-203ENST00000372459 ARMT1Q9H993 441 aa29.52■■■□□ 2.32
CTSA-203ENST00000372459 HIBADHP31937 336 aaKnown RBP29.51■■■□□ 2.31
CTSA-203ENST00000372459 TRDNQ13061 729 aa29.51■■■□□ 2.31
CTSA-203ENST00000372459 CHST3Q7LGC8 479 aa29.51■■■□□ 2.31
CTSA-203ENST00000372459 RAI14Q9P0K7 980 aa29.51■■■□□ 2.31
CTSA-203ENST00000372459 PDS5AQ29RF7 1337 aaKnown RBP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms