RNA–Protein interactions for RNA: ENST00000368259.6

CCT3-204, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2 BASIC

Gene CCT3, Length 1,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-204ENST00000368259 SDF4Q9BRK5 362 aa15.14■□□□□ 0.01
CCT3-204ENST00000368259 ATXN2Q99700 1313 aaKnown RBP15.13■□□□□ 0.01
CCT3-204ENST00000368259 H3BQF6 201 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 TOM1O60784 492 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 HSPA1LP34931 641 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 HSP90B2PQ58FF3 399 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 AGXT2Q9BYV1 514 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 ZCCHC17Q9NP64 241 aaKnown RBP15.13■□□□□ 0.01
CCT3-204ENST00000368259 POLR3EQ9NVU0 708 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 L1RE1Q9UN81 338 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
CCT3-204ENST00000368259 SALL1Q9NSC2 1324 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 CCDC196A0A1B0GTZ2 297 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 MCM3P25205 808 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 TMEM139Q8IV31 216 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 FBXL16Q8N461 479 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 NEK1Q96PY6 1258 aa15.13■□□□□ 0.01
CCT3-204ENST00000368259 UBR1Q8IWV7 1749 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 NEDD4P46934 1319 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 IGSF1Q8N6C5 1336 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 SLC3A2P08195 630 aaKnown RBP15.12■□□□□ 0.01
CCT3-204ENST00000368259 AARSP49588 968 aaKnown RBP eCLIP15.12■□□□□ 0.01
CCT3-204ENST00000368259 MYL5Q02045 173 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 TBX2Q13207 712 aaPredicted RBP15.12■□□□□ 0.01
CCT3-204ENST00000368259 NMIQ13287 307 aaPredicted RBP15.12■□□□□ 0.01
CCT3-204ENST00000368259 DPCR1Q3MIW9 517 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 DNAJC21Q5F1R6 531 aaKnown RBP15.12■□□□□ 0.01
CCT3-204ENST00000368259 TADA2BQ86TJ2 420 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 DNAAF4Q8WXU2 420 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 CCDC34Q96HJ3 373 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 USP28Q96RU2 1077 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 A1CFQ9NQ94 594 aaKnown RBP15.12■□□□□ 0.01
CCT3-204ENST00000368259 TUBE1Q9UJT0 475 aa15.12■□□□□ 0.01
CCT3-204ENST00000368259 PTPRUQ92729 1446 aa15.11■□□□□ 0.01
CCT3-204ENST00000368259 FLT4P35916 1363 aa15.11■□□□□ 0.01
CCT3-204ENST00000368259 CEMIPQ8WUJ3 1361 aa15.11■□□□□ 0.01
CCT3-204ENST00000368259 MAP3K15Q6ZN16 1313 aa15.11■□□□□ 0.01
CCT3-204ENST00000368259 FANCGO15287 622 aa15.11■□□□□ 0.01
CCT3-204ENST00000368259 TOP1P11387 765 aaKnown RBP15.11■□□□□ 0.01
CCT3-204ENST00000368259 ME1P48163 572 aa15.11■□□□□ 0.01
CCT3-204ENST00000368259 CHMP4BP1P59074 171 aa15.11■□□□□ 0.01
CCT3-204ENST00000368259 TRDNQ13061 729 aa15.11■□□□□ 0.01
CCT3-204ENST00000368259 NAA15Q9BXJ9 866 aaKnown RBP15.11■□□□□ 0.01
CCT3-204ENST00000368259 VPS18Q9P253 973 aa15.11■□□□□ 0.01
CCT3-204ENST00000368259 CCDC172P0C7W6 258 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 UBASH3AP57075 661 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 GNG11P61952 73 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 MAPK8IP2Q13387 824 aaPredicted RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 FBXO31Q5XUX0 539 aaPredicted RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 BRAPQ7Z569 592 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 NSUN7Q8NE18 718 aaKnown RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 RNF216Q9NWF9 866 aaPredicted RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 DONSONQ9NYP3 566 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 CEP83Q9Y592 693 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 ANKARQ7Z5J8 1434 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 KDM3BQ7LBC6 1761 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 FAM237AA0A1B0GTK4 181 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 A6NNZ2 444 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 CUTAO60888 179 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 GNL2Q13823 731 aaKnown RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 TUBB8Q3ZCM7 444 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 NUTM2DQ5VT03 806 aaPredicted RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 SECISBP2LQ93073 1101 aaKnown RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 NUDT16Q96DE0 195 aaKnown RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 BAG1Q99933 345 aaPredicted RBP15.1■□□□□ 0.01
CCT3-204ENST00000368259 CDC23Q9UJX2 597 aa15.1■□□□□ 0.01
CCT3-204ENST00000368259 USP54Q70EL1 1684 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 NRXN3Q9Y4C0 1643 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 JAK2O60674 1132 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 TAF5LO75529 589 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 CMA1P23946 247 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 OS9Q13438 667 aaPredicted RBP15.09■□□□□ 0.01
CCT3-204ENST00000368259 BEND3Q5T5X7 828 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 WDR93Q6P2C0 686 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 MYO1AQ9UBC5 1043 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 PCDHA7Q9UN72 937 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 MAP3K19Q56UN5 1328 aa15.09■□□□□ 0.01
CCT3-204ENST00000368259 GYS2P54840 703 aa15.08■□□□□ 0.01
CCT3-204ENST00000368259 PIP4K2BP78356 416 aa15.08■□□□□ 0.01
CCT3-204ENST00000368259 POTEDQ86YR6 584 aa15.08■□□□□ 0.01
CCT3-204ENST00000368259 CERS3Q8IU89 383 aa15.08■□□□□ 0.01
CCT3-204ENST00000368259 CEP120Q8N960 986 aa15.08■□□□□ 0.01
CCT3-204ENST00000368259 LINC00301Q8NCQ3 95 aa15.08■□□□□ 0.01
CCT3-204ENST00000368259 STAG1Q8WVM7 1258 aa15.08■□□□□ 0.01
CCT3-204ENST00000368259 ZNF274Q96GC6 653 aaPredicted RBP15.08■□□□□ 0.01
CCT3-204ENST00000368259 PDE11AQ9HCR9 933 aa15.08■□□□□ 0.01
CCT3-204ENST00000368259 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
CCT3-204ENST00000368259 SCRN1Q12765 414 aa15.08■□□□□ 0
CCT3-204ENST00000368259 WHAMMP3Q1A5X7 153 aa15.08■□□□□ 0
CCT3-204ENST00000368259 CT47A1Q5JQC4 288 aaPredicted RBP15.08■□□□□ 0
CCT3-204ENST00000368259 ARHGEF25Q86VW2 580 aa15.08■□□□□ 0
CCT3-204ENST00000368259 HSD3B7Q9H2F3 369 aa15.08■□□□□ 0
CCT3-204ENST00000368259 LAMA4Q16363 1823 aa15.07■□□□□ 0
CCT3-204ENST00000368259 SHOX2O60902 331 aaPredicted RBP15.07■□□□□ 0
CCT3-204ENST00000368259 CCDC175P0C221 793 aa15.07■□□□□ 0
CCT3-204ENST00000368259 TAF7Q15545 349 aaPredicted RBP15.07■□□□□ 0
CCT3-204ENST00000368259 MAP9Q49MG5 647 aa15.07■□□□□ 0
CCT3-204ENST00000368259 LRRC31Q6UY01 552 aa15.07■□□□□ 0
CCT3-204ENST00000368259 FAM227BQ96M60 508 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms