RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 CEP85Q6P2H3 762 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 STX6O43752 255 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 GNA11P29992 359 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 NOP56O00567 594 aaKnown RBP12.32□□□□□ -0.44
PTPRK-205ENST00000368213 MTIF2P46199 727 aaKnown RBP12.32□□□□□ -0.44
PTPRK-205ENST00000368213 TNNI3KQ59H18 835 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 KIAA0825Q8IV33 1275 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 FPGT-TNNI3KV9GXZ4 949 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 INSRP06213 1382 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 TCP10L2B9ZVM9 353 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 BMP15O95972 392 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 CPXCR1Q8N123 301 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
PTPRK-205ENST00000368213 CIZ1Q9ULV3 898 aaPredicted RBP12.32□□□□□ -0.44
PTPRK-205ENST00000368213 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
PTPRK-205ENST00000368213 EPB41L2O43491 1005 aaKnown RBP12.31□□□□□ -0.44
PTPRK-205ENST00000368213 NUCB1Q02818 461 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 Q6ZUG5 572 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 MAPKAPK5Q8IW41 473 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 FSIP1Q8NA03 581 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 TCEANC2Q96MN5 208 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 PAGR1Q9BTK6 254 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 SPC25Q9HBM1 224 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 EXOC1Q9NV70 894 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 PLXNC1O60486 1568 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 TTC37Q6PGP7 1564 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 ANAPC15P60006 121 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 GADL1Q6ZQY3 521 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 USP19O94966 1318 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTPRK-205ENST00000368213 HDAC1Q13547 482 aaPredicted RBP12.31□□□□□ -0.44
PTPRK-205ENST00000368213 FCHSD1Q86WN1 690 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 FAM212AQ96EL1 285 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 CHL1O00533 1208 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 HSP90B2PQ58FF3 399 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 SPATA5Q8NB90 893 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
PTPRK-205ENST00000368213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.441e-9■■□□□ 13.6
PTPRK-205ENST00000368213 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
PTPRK-205ENST00000368213 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-205ENST00000368213 SPA17Q15506 151 aa12.3□□□□□ -0.44
PTPRK-205ENST00000368213 SEPT7Q16181 437 aaKnown RBP12.3□□□□□ -0.44
PTPRK-205ENST00000368213 APBB1IPQ7Z5R6 666 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-205ENST00000368213 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
PTPRK-205ENST00000368213 SUCLG2Q96I99 432 aa12.3□□□□□ -0.44
PTPRK-205ENST00000368213 TTLL7Q6ZT98 887 aa12.3□□□□□ -0.44
PTPRK-205ENST00000368213 RFX1P22670 979 aa12.3□□□□□ -0.44
PTPRK-205ENST00000368213 SCNN1DP51172 638 aa12.3□□□□□ -0.44
PTPRK-205ENST00000368213 ERCC4Q92889 916 aaPredicted RBP12.3□□□□□ -0.44
PTPRK-205ENST00000368213 ANO10Q9NW15 660 aa12.3□□□□□ -0.44
PTPRK-205ENST00000368213 ANKRD62A6NC57 917 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 MYCLP12524 364 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-205ENST00000368213 STAT6P42226 847 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 SLC1A4P43007 532 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 MRE11P49959 708 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 CHST3Q7LGC8 479 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 DBNDD2Q9BQY9 259 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 HOMER2Q9NSB8 354 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 RBM28Q9NW13 759 aaKnown RBP12.29□□□□□ -0.44
PTPRK-205ENST00000368213 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 CCDC93Q567U6 631 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 NSMFQ6X4W1 530 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 HELLSQ9NRZ9 838 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 KRT13P13646 458 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 CNGA1P29973 690 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 HSPA1LP34931 641 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 FAM177A1Q8N128 213 aaPredicted RBP12.29□□□□□ -0.44
PTPRK-205ENST00000368213 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
PTPRK-205ENST00000368213 KCNQ3O43525 872 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 TDRD12Q587J7 1177 aaKnown RBP12.29□□□□□ -0.44
PTPRK-205ENST00000368213 KRT79Q5XKE5 535 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 KANK3Q6NY19 840 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 SPATA31A3Q5VYP0 1347 aa12.29□□□□□ -0.44
PTPRK-205ENST00000368213 GIGYF1O75420 1035 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-205ENST00000368213 FAM13AO94988 1023 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-205ENST00000368213 NECAB1Q8N987 351 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 SYNCQ9H7C4 482 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 HSP90AA2PQ14568 343 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-205ENST00000368213 FAM114A1Q8IWE2 563 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 JCADQ9P266 1359 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 KRT2P35908 639 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 ERCC6L2Q5T890 1561 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 ADGBQ8N7X0 1667 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 ZBTB38Q8NAP3 1195 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-205ENST00000368213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.28□□□□□ -0.44
PTPRK-205ENST00000368213 ZBTB1Q9Y2K1 713 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 NAP1L4Q99733 375 aaKnown RBP12.28□□□□□ -0.44
PTPRK-205ENST00000368213 FILIP1Q7Z7B0 1213 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
PTPRK-205ENST00000368213 ANKARQ7Z5J8 1434 aa12.27□□□□□ -0.44
PTPRK-205ENST00000368213 ADGRL3Q9HAR2 1447 aa12.27□□□□□ -0.44
PTPRK-205ENST00000368213 MACROD2A1Z1Q3 448 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 636 ms