RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 LGSNQ5TDP6 509 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 TSR2Q969E8 191 aaKnown RBP9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 ZNF569Q5MCW4 686 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 UBXN1Q04323 297 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 PDE4BQ07343 736 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 SOGA1O94964 1423 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 RTL1A6NKG5 1358 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 HHATQ5VTY9 493 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 ABTB2Q8N961 1025 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 ANKRD30BQ9BXX2 1392 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 NBPF7P0C2Y1 421 aaPredicted RBP9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 NLRP6P59044 892 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 BAG5Q9UL15 447 aa9.42□□□□□ -0.9
NCKAP1-202ENST00000361354 MTHFSP49914 203 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 USP6NLQ92738 828 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 KIFAP3Q92845 792 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 FHOD3Q2V2M9 1422 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 NKTRP30414 1462 aaKnown RBP9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 IFIT1P09914 478 aaKnown RBP9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 ASIC1P78348 528 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 SPDL1Q96EA4 605 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 SERPINI2O75830 405 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 MICU3Q86XE3 530 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 PAWRQ96IZ0 340 aaKnown RBP9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 TRIM14Q14142 442 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 ERO1AQ96HE7 468 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 PPP1R21Q6ZMI0 780 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 NUTM1Q86Y26 1132 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 PCYT1AP49585 367 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 LZTFL1Q9NQ48 299 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 IARSP41252 1262 aaKnown RBP9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 SPC25Q9HBM1 224 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 RIPOR2Q9Y4F9 1068 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 CDR2Q01850 454 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 TMEM67Q5HYA8 995 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 NRBF2Q96F24 287 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 E9PMD0 336 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 SLC5A1P13866 664 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 MUM1L1Q5H9M0 696 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 ARMC9Q7Z3E5 817 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 ANKIB1Q9P2G1 1089 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 STK38LQ9Y2H1 464 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 AOPEPQ8N6M6 819 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 EPS15L1Q9UBC2 864 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 MCM7P33993 719 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 MRPS27Q92552 414 aaKnown RBP9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 KAT14Q9H8E8 782 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 VGLL3A8MV65 326 aa9.41□□□□□ -0.9
NCKAP1-202ENST00000361354 CCDC93Q567U6 631 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 GOLGA8QA0A0J9YX86 632 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 GOLGA8OA6NCC3 632 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 GOLGA8NF8WBI6 632 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 RIOK3O14730 519 aaKnown RBP9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 ESRRGP62508 458 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 TMED1Q13445 227 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 PPFIA4O75335 1185 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 EVCP57679 992 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 DDX21Q9NR30 783 aaKnown RBP eCLIP9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 NUB1Q9Y5A7 615 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 SPOPO43791 374 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 GFAPP14136 432 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 ARHGAP4P98171 946 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 BAIAP2L1Q9UHR4 511 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 NUMA1Q14980 2115 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 TROVE2P10155 538 aaKnown RBP eCLIP9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 EVI5O60447 810 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 GABPAQ06546 454 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 CEP104O60308 925 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 DUSP27Q5VZP5 1158 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
NCKAP1-202ENST00000361354 TRAF1Q13077 416 aa9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 RPAP2Q8IXW5 612 aaPredicted RBP9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 CCT2P78371 535 aaKnown RBP9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 NAPGQ99747 312 aaPredicted RBP9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 SESN3P58005 492 aa9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 RASIP1Q5U651 963 aa9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 CCDC125Q86Z20 511 aa9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 RILPQ96NA2 401 aa9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 PLCB4Q15147 1175 aa9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 RPS6KA2Q15349 733 aa9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 TAF12Q16514 161 aa9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 CTTNBP2NLQ9P2B4 639 aa9.4□□□□□ -0.91
NCKAP1-202ENST00000361354 ARHGAP42A6NI28 874 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 SLC8A3P57103 927 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 FAM71BQ8TC56 605 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 SNCBQ16143 134 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 BTBD11A6QL63 1104 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 ZNF530Q6P9A1 599 aaPredicted RBP9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 GGNBP2Q9H3C7 697 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 FRMD4BQ9Y2L6 1034 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 RNF40O75150 1001 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 VWA3BQ502W6 1294 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 P3H4Q92791 437 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 ISM2Q6H9L7 571 aa9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 TACO1Q9BSH4 297 aaKnown RBP9.39□□□□□ -0.91
NCKAP1-202ENST00000361354 PALMDQ9NP74 551 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1459 ms