RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 CCDC158Q5M9N0 1113 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 TTC39AQ5SRH9 613 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 VPS53Q5VIR6 699 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.09■■□□□ 1.45
CBWD3-201ENST00000360171 ZSCAN31Q96LW9 406 aaPredicted RBP24.09■■□□□ 1.45
CBWD3-201ENST00000360171 GDPD2Q9HCC8 539 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 PNPLA7Q6ZV29 1317 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 NRXN2Q9P2S2 1712 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 F13A1P00488 732 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 SCARF1Q14162 830 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 FAM227BQ96M60 508 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 SH2B1Q9NRF2 756 aaPredicted RBP24.09■■□□□ 1.45
CBWD3-201ENST00000360171 SMC3Q9UQE7 1217 aa24.09■■□□□ 1.45
CBWD3-201ENST00000360171 ANKRD31Q8N7Z5 1873 aa24.08■■□□□ 1.45
CBWD3-201ENST00000360171 POLRMTO00411 1230 aaKnown RBP24.08■■□□□ 1.45
CBWD3-201ENST00000360171 PDIA4P13667 645 aaKnown RBP24.08■■□□□ 1.45
CBWD3-201ENST00000360171 NMIQ13287 307 aaPredicted RBP24.08■■□□□ 1.45
CBWD3-201ENST00000360171 LPIN2Q92539 896 aa24.08■■□□□ 1.45
CBWD3-201ENST00000360171 PAG1Q9NWQ8 432 aa24.08■■□□□ 1.45
CBWD3-201ENST00000360171 MYO5AQ9Y4I1 1855 aaKnown RBP24.08■■□□□ 1.45
CBWD3-201ENST00000360171 MYH7P12883 1935 aa24.08■■□□□ 1.44
CBWD3-201ENST00000360171 GOLIM4O00461 696 aa24.08■■□□□ 1.44
CBWD3-201ENST00000360171 BSDC1Q9NW68 430 aaPredicted RBP24.08■■□□□ 1.44
CBWD3-201ENST00000360171 R3HCC1Q9Y3T6 440 aaKnown RBP24.08■■□□□ 1.44
CBWD3-201ENST00000360171 QSER1Q2KHR3 1735 aa24.07■■□□□ 1.44
CBWD3-201ENST00000360171 RFX7Q2KHR2 1363 aa24.06■■□□□ 1.44
CBWD3-201ENST00000360171 A0A0D9SFI3 127 aa24.06■■□□□ 1.44
CBWD3-201ENST00000360171 CHGBP05060 677 aa24.06■■□□□ 1.44
CBWD3-201ENST00000360171 CNPY2Q9Y2B0 182 aa24.06■■□□□ 1.44
CBWD3-201ENST00000360171 HIP1O00291 1037 aa24.06■■□□□ 1.44
CBWD3-201ENST00000360171 KBTBD3Q8NAB2 608 aa24.06■■□□□ 1.44
CBWD3-201ENST00000360171 ZSWIM6Q9HCJ5 1215 aa24.06■■□□□ 1.44
CBWD3-201ENST00000360171 SNRKQ9NRH2 765 aa24.06■■□□□ 1.44
CBWD3-201ENST00000360171 CASTP20810 708 aaKnown RBP24.05■■□□□ 1.44
CBWD3-201ENST00000360171 PHKA1P46020 1223 aa24.05■■□□□ 1.44
CBWD3-201ENST00000360171 MAP7D2Q96T17 732 aa24.05■■□□□ 1.44
CBWD3-201ENST00000360171 RPS8P62241 208 aaKnown RBP24.05■■□□□ 1.44
CBWD3-201ENST00000360171 PI16Q6UXB8 463 aa24.05■■□□□ 1.44
CBWD3-201ENST00000360171 FLAD1Q8NFF5 587 aa24.05■■□□□ 1.44
CBWD3-201ENST00000360171 PTMAP06454 111 aaKnown RBP24.04■■□□□ 1.44
CBWD3-201ENST00000360171 SLC5A1P13866 664 aa24.04■■□□□ 1.44
CBWD3-201ENST00000360171 CCDC102BQ68D86 513 aa24.04■■□□□ 1.44
CBWD3-201ENST00000360171 MINPP1Q9UNW1 487 aa24.04■■□□□ 1.44
CBWD3-201ENST00000360171 MCAMP43121 646 aa24.03■■□□□ 1.44
CBWD3-201ENST00000360171 ST5P78524 1137 aa24.03■■□□□ 1.44
CBWD3-201ENST00000360171 KIAA2012Q0VF49 1180 aa24.03■■□□□ 1.44
CBWD3-201ENST00000360171 FOXD4L6Q3SYB3 417 aaPredicted RBP24.03■■□□□ 1.44
CBWD3-201ENST00000360171 FOXD4L3Q6VB84 417 aaPredicted RBP24.03■■□□□ 1.44
CBWD3-201ENST00000360171 MED23Q9ULK4 1368 aa24.03■■□□□ 1.44
CBWD3-201ENST00000360171 FKBP4Q02790 459 aaKnown RBP eCLIP24.03■■□□□ 1.44
CBWD3-201ENST00000360171 ZNF512BQ96KM6 892 aaPredicted RBP24.03■■□□□ 1.44
CBWD3-201ENST00000360171 CYP46A1Q9Y6A2 500 aa24.03■■□□□ 1.44
CBWD3-201ENST00000360171 WTIPA6NIX2 430 aaPredicted RBP24.02■■□□□ 1.44
CBWD3-201ENST00000360171 ZAP70P43403 619 aa24.02■■□□□ 1.44
CBWD3-201ENST00000360171 NECTIN1Q15223 517 aa24.02■■□□□ 1.44
CBWD3-201ENST00000360171 PDRG1Q9NUG6 133 aa24.02■■□□□ 1.44
CBWD3-201ENST00000360171 ARID4AP29374 1257 aaPredicted RBP24.02■■□□□ 1.44
CBWD3-201ENST00000360171 SASS6Q6UVJ0 657 aa24.02■■□□□ 1.44
CBWD3-201ENST00000360171 NLGN1Q8N2Q7 840 aa24.02■■□□□ 1.44
CBWD3-201ENST00000360171 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.02■■□□□ 1.44
CBWD3-201ENST00000360171 PTH1RQ03431 593 aa24.01■■□□□ 1.43
CBWD3-201ENST00000360171 MTMR6Q9Y217 621 aa24.01■■□□□ 1.43
CBWD3-201ENST00000360171 CCDC171Q6TFL3 1326 aa24.01■■□□□ 1.43
CBWD3-201ENST00000360171 DYNC1I1O14576 645 aa24.01■■□□□ 1.43
CBWD3-201ENST00000360171 SLC15A2Q16348 729 aa24.01■■□□□ 1.43
CBWD3-201ENST00000360171 CRY2Q49AN0 593 aa24.01■■□□□ 1.43
CBWD3-201ENST00000360171 SLC51AQ86UW1 340 aa24.01■■□□□ 1.43
CBWD3-201ENST00000360171 JAKMIP1Q96N16 626 aaKnown RBP24.01■■□□□ 1.43
CBWD3-201ENST00000360171 LARGE1O95461 756 aa24■■□□□ 1.43
CBWD3-201ENST00000360171 GJB2P29033 226 aa24■■□□□ 1.43
CBWD3-201ENST00000360171 SLFNL1Q499Z3 407 aa24■■□□□ 1.43
CBWD3-201ENST00000360171 DEFB132Q7Z7B7 95 aa24■■□□□ 1.43
CBWD3-201ENST00000360171 ZNF589Q86UQ0 364 aaPredicted RBP24■■□□□ 1.43
CBWD3-201ENST00000360171 FUCA2Q9BTY2 467 aa24■■□□□ 1.43
CBWD3-201ENST00000360171 DOCK2Q92608 1830 aa24■■□□□ 1.43
CBWD3-201ENST00000360171 ZKSCAN1P17029 563 aaPredicted RBP23.99■■□□□ 1.43
CBWD3-201ENST00000360171 UQCRHLA0A096LP55 91 aa23.99■■□□□ 1.43
CBWD3-201ENST00000360171 UQCRHP07919 91 aa23.99■■□□□ 1.43
CBWD3-201ENST00000360171 GRAPQ13588 217 aa23.99■■□□□ 1.43
CBWD3-201ENST00000360171 MSL1Q68DK7 614 aa23.99■■□□□ 1.43
CBWD3-201ENST00000360171 GRAPLQ8TC17 118 aaPredicted RBP23.99■■□□□ 1.43
CBWD3-201ENST00000360171 PRPF40BQ6NWY9 871 aaKnown RBP23.98■■□□□ 1.43
CBWD3-201ENST00000360171 CCDC83Q8IWF9 413 aa23.98■■□□□ 1.43
CBWD3-201ENST00000360171 SEC62Q99442 399 aaKnown RBP23.98■■□□□ 1.43
CBWD3-201ENST00000360171 COL11A2P13942 1736 aaPredicted RBP23.98■■□□□ 1.43
CBWD3-201ENST00000360171 BCAMP50895 628 aa23.98■■□□□ 1.43
CBWD3-201ENST00000360171 ADCK5Q3MIX3 580 aa23.98■■□□□ 1.43
CBWD3-201ENST00000360171 MTERF4Q7Z6M4 381 aaKnown RBP23.98■■□□□ 1.43
CBWD3-201ENST00000360171 UQCRFS1P1P0C7P4 283 aa23.97■■□□□ 1.43
CBWD3-201ENST00000360171 UBE4AQ14139 1066 aa23.97■■□□□ 1.43
CBWD3-201ENST00000360171 MAP4K1Q92918 833 aa23.97■■□□□ 1.43
CBWD3-201ENST00000360171 STK32BQ9NY57 414 aa23.97■■□□□ 1.43
CBWD3-201ENST00000360171 FIBPO43427 364 aa23.96■■□□□ 1.43
CBWD3-201ENST00000360171 MMP10P09238 476 aa23.96■■□□□ 1.43
CBWD3-201ENST00000360171 BAG6P46379 1132 aa23.96■■□□□ 1.43
CBWD3-201ENST00000360171 PIBF1Q8WXW3 757 aa23.96■■□□□ 1.43
CBWD3-201ENST00000360171 RPGRQ92834 1020 aaKnown RBP23.96■■□□□ 1.43
CBWD3-201ENST00000360171 ALDH8A1Q9H2A2 487 aaPredicted RBP23.96■■□□□ 1.43
CBWD3-201ENST00000360171 HMG20BQ9P0W2 317 aa23.96■■□□□ 1.43
CBWD3-201ENST00000360171 USP25Q9UHP3 1055 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms