RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TTLL11Q8NHH1 800 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 LRCH3Q96II8 777 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 PSMD1Q99460 953 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 TAOK3Q9H2K8 898 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.99□□□□□ -1.61
CNOT4-202ENST00000356162 PNMA3Q9UL41 463 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 HDAC5Q9UQL6 1122 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 TESPA1A2RU30 521 aaPredicted RBP4.99□□□□□ -1.61
CNOT4-202ENST00000356162 CSF1RP07333 972 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 FOXO4P98177 505 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 PTGDRQ13258 359 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 FAM161AQ3B820 660 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 NUDT18Q6ZVK8 323 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 ANKRD18AQ8IVF6 992 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 SP8Q8IXZ3 490 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 FTSJ3Q8IY81 847 aaKnown RBP4.99□□□□□ -1.61
CNOT4-202ENST00000356162 JARID2Q92833 1246 aaPredicted RBP4.99□□□□□ -1.61
CNOT4-202ENST00000356162 FRAT1Q92837 279 aaPredicted RBP4.99□□□□□ -1.61
CNOT4-202ENST00000356162 SUCLG2Q96I99 432 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 YTHDC1Q96MU7 727 aaKnown RBP4.99□□□□□ -1.61
CNOT4-202ENST00000356162 TMX4Q9H1E5 349 aaPredicted RBP4.99□□□□□ -1.61
CNOT4-202ENST00000356162 WBP1LQ9NX94 342 aa4.99□□□□□ -1.61
CNOT4-202ENST00000356162 PSME4Q14997 1843 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 LMNB1P20700 586 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 RABL6Q3YEC7 729 aaPredicted RBP4.98□□□□□ -1.61
CNOT4-202ENST00000356162 IFFO2Q5TF58 517 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 NYAP1Q6ZVC0 841 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 DZIP1LQ8IYY4 767 aaKnown RBP4.98□□□□□ -1.61
CNOT4-202ENST00000356162 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.98□□□□□ -1.61
CNOT4-202ENST00000356162 SUPT20HQ8NEM7 779 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 CELF1Q92879 486 aaKnown RBP4.98□□□□□ -1.61
CNOT4-202ENST00000356162 GREM2Q9H772 168 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 ARAP2Q8WZ64 1704 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 WDR90Q96KV7 1748 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 ANKRD18BA2A2Z9 1011 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 GNAI3P08754 354 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 UBTFL1P0CB47 393 aaPredicted RBP4.98□□□□□ -1.61
CNOT4-202ENST00000356162 ITGA6P23229 1130 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 IGHMBP2P38935 993 aaKnown RBP4.98□□□□□ -1.61
CNOT4-202ENST00000356162 RPS8P62241 208 aaKnown RBP4.98□□□□□ -1.61
CNOT4-202ENST00000356162 C9orf131Q5VYM1 1079 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 TMEM57Q8N5G2 664 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 ANKRD44Q8N8A2 993 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 RTFDC1Q9BY42 306 aaPredicted RBP4.98□□□□□ -1.61
CNOT4-202ENST00000356162 USP44Q9H0E7 712 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 VPS33BQ9H267 617 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 SEC31BQ9NQW1 1179 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 RNF181Q9P0P0 153 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 TSR3Q9UJK0 312 aaKnown RBP4.98□□□□□ -1.61
CNOT4-202ENST00000356162 TNNQ9UQP3 1299 aa4.98□□□□□ -1.61
CNOT4-202ENST00000356162 COL4A5P29400 1685 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 NBPF7P0C2Y1 421 aaPredicted RBP4.97□□□□□ -1.61
CNOT4-202ENST00000356162 YY1P25490 414 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 IFIT5Q13325 482 aaKnown RBP4.97□□□□□ -1.61
CNOT4-202ENST00000356162 EPHA10Q5JZY3 1008 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 LMBR1LQ6UX01 489 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 SAMD7Q7Z3H4 446 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 KAZALD1Q96I82 304 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 MEIS3Q99687 375 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 BICC1Q9H694 974 aaKnown RBP4.97□□□□□ -1.61
CNOT4-202ENST00000356162 BSDC1Q9NW68 430 aaPredicted RBP4.97□□□□□ -1.61
CNOT4-202ENST00000356162 PODXL2Q9NZ53 605 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 HPS5Q9UPZ3 1129 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 CHMP3Q9Y3E7 222 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 ZNF646O15015 1829 aaPredicted RBP4.97□□□□□ -1.61
CNOT4-202ENST00000356162 IARSP41252 1262 aaKnown RBP4.97□□□□□ -1.61
CNOT4-202ENST00000356162 OLFM4Q6UX06 510 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 DPP8Q6V1X1 898 aaPredicted RBP4.97□□□□□ -1.61
CNOT4-202ENST00000356162 MPNDQ8N594 471 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 CCDC85AQ96PX6 553 aaPredicted RBP4.97□□□□□ -1.61
CNOT4-202ENST00000356162 EYA3Q99504 573 aa4.97□□□□□ -1.61
CNOT4-202ENST00000356162 XDHP47989 1333 aa4.96□□□□□ -1.61
CNOT4-202ENST00000356162 RLBP1P12271 317 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 ATP2B4P23634 1241 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 PRELPP51888 382 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 CCDC57Q2TAC2 916 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 TAF7LQ5H9L4 462 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 SLC51AQ86UW1 340 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 ITPRIPQ8IWB1 547 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 CLUAP1Q96AJ1 413 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 MPHOSPH8Q99549 860 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 GGA1Q9UJY5 639 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 LRRFIP2Q9Y608 721 aaKnown RBP4.96□□□□□ -1.62
CNOT4-202ENST00000356162 MED23Q9ULK4 1368 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 ZNF609O15014 1411 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 ITGBL1O95965 494 aaPredicted RBP4.96□□□□□ -1.62
CNOT4-202ENST00000356162 GNAI2P04899 355 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 RRP1P56182 461 aaKnown RBP4.96□□□□□ -1.62
CNOT4-202ENST00000356162 GPSM2P81274 684 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 KIAA2012Q0VF49 1180 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 MTX1Q13505 466 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 PDE3AQ14432 1141 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 MVPQ14764 893 aaKnown RBP4.96□□□□□ -1.62
CNOT4-202ENST00000356162 ANKRD2Q9GZV1 360 aa4.96□□□□□ -1.62
CNOT4-202ENST00000356162 CHMP4BQ9H444 224 aaKnown RBP4.96□□□□□ -1.62
CNOT4-202ENST00000356162 ZNF277Q9NRM2 450 aaPredicted RBP4.96□□□□□ -1.62
CNOT4-202ENST00000356162 SCN4AP35499 1836 aa4.95□□□□□ -1.62
CNOT4-202ENST00000356162 PPIP5K2O43314 1243 aa4.95□□□□□ -1.62
CNOT4-202ENST00000356162 UFL1O94874 794 aa4.95□□□□□ -1.62
CNOT4-202ENST00000356162 RFX5P48382 616 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms