RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 BCAMP50895 628 aa20.08■□□□□ 0.81
RAB5C-201ENST00000346213 TRPM7Q96QT4 1865 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 RASSF10A6NK89 507 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 WNT10BO00744 389 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 IPO8O15397 1037 aaKnown RBP20.07■□□□□ 0.8
RAB5C-201ENST00000346213 MTX1Q13505 466 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 KRT26Q7Z3Y9 468 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 ZNF804AQ7Z570 1209 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 PANK1Q8TE04 598 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 PRAMEF18Q5VWM3 479 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 CDC37L1Q7L3B6 337 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 ZNF408Q9H9D4 720 aa20.07■□□□□ 0.8
RAB5C-201ENST00000346213 POLR2AP24928 1970 aaKnown RBP20.06■□□□□ 0.8
RAB5C-201ENST00000346213 FAM205AQ6ZU69 1335 aa20.06■□□□□ 0.8
RAB5C-201ENST00000346213 F8W031 263 aaPredicted RBP20.06■□□□□ 0.8
RAB5C-201ENST00000346213 HIBADHP31937 336 aaKnown RBP20.06■□□□□ 0.8
RAB5C-201ENST00000346213 COPRSQ9NQ92 184 aa20.06■□□□□ 0.8
RAB5C-201ENST00000346213 ARAP2Q8WZ64 1704 aa20.05■□□□□ 0.8
RAB5C-201ENST00000346213 TLL2Q9Y6L7 1015 aa20.05■□□□□ 0.8
RAB5C-201ENST00000346213 THSD7BQ9C0I4 1608 aa20.05■□□□□ 0.8
RAB5C-201ENST00000346213 GNAI3P08754 354 aa20.04■□□□□ 0.8
RAB5C-201ENST00000346213 ADORA1P30542 326 aa20.04■□□□□ 0.8
RAB5C-201ENST00000346213 SAPCD2Q86UD0 394 aa20.04■□□□□ 0.8
RAB5C-201ENST00000346213 DZIP1LQ8IYY4 767 aaKnown RBP20.04■□□□□ 0.8
RAB5C-201ENST00000346213 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
RAB5C-201ENST00000346213 MYO3BQ8WXR4 1341 aa20.04■□□□□ 0.8
RAB5C-201ENST00000346213 ZBTB7BO15156 539 aaPredicted RBP20.03■□□□□ 0.8
RAB5C-201ENST00000346213 SRGAP3O43295 1099 aa20.03■□□□□ 0.8
RAB5C-201ENST00000346213 CIAO1O76071 339 aa20.03■□□□□ 0.8
RAB5C-201ENST00000346213 PUM3Q15397 648 aaKnown RBP20.03■□□□□ 0.8
RAB5C-201ENST00000346213 CYP4F22Q6NT55 531 aa20.03■□□□□ 0.8
RAB5C-201ENST00000346213 ABT1Q9ULW3 272 aaKnown RBP20.03■□□□□ 0.8
RAB5C-201ENST00000346213 RRP1P56182 461 aaKnown RBP20.03■□□□□ 0.8
RAB5C-201ENST00000346213 CDCA5Q96FF9 252 aa20.03■□□□□ 0.8
RAB5C-201ENST00000346213 C20orf194Q5TEA3 1177 aa20.02■□□□□ 0.8
RAB5C-201ENST00000346213 MOB2Q70IA6 237 aa20.02■□□□□ 0.8
RAB5C-201ENST00000346213 ZIC5Q96T25 663 aa20.02■□□□□ 0.8
RAB5C-201ENST00000346213 GNAI2P04899 355 aa20.01■□□□□ 0.79
RAB5C-201ENST00000346213 MFSD14BQ5SR56 506 aa20.01■□□□□ 0.79
RAB5C-201ENST00000346213 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
RAB5C-201ENST00000346213 DCPSQ96C86 337 aaKnown RBP20.01■□□□□ 0.79
RAB5C-201ENST00000346213 SSC5DA1L4H1 1573 aa20.01■□□□□ 0.79
RAB5C-201ENST00000346213 TFCP2Q12800 502 aa20■□□□□ 0.79
RAB5C-201ENST00000346213 CHAF1AQ13111 956 aaPredicted RBP20■□□□□ 0.79
RAB5C-201ENST00000346213 POLA2Q14181 598 aa20■□□□□ 0.79
RAB5C-201ENST00000346213 DEFB115Q30KQ5 88 aa20■□□□□ 0.79
RAB5C-201ENST00000346213 PRMT6Q96LA8 375 aaPredicted RBP20■□□□□ 0.79
RAB5C-201ENST00000346213 AOC2O75106 756 aa20■□□□□ 0.79
RAB5C-201ENST00000346213 HSPA1AP0DMV8 641 aaKnown RBP20■□□□□ 0.79
RAB5C-201ENST00000346213 HSPA1BP0DMV9 641 aaKnown RBP20■□□□□ 0.79
RAB5C-201ENST00000346213 PHKA1P46020 1223 aa20■□□□□ 0.79
RAB5C-201ENST00000346213 FKBP1AP62942 108 aaKnown RBP20■□□□□ 0.79
RAB5C-201ENST00000346213 ATP2B3Q16720 1220 aa20■□□□□ 0.79
RAB5C-201ENST00000346213 CFAP100Q494V2 611 aa20■□□□□ 0.79
RAB5C-201ENST00000346213 LPIN2Q92539 896 aa20■□□□□ 0.79
RAB5C-201ENST00000346213 FZD1Q9UP38 647 aa20■□□□□ 0.79
RAB5C-201ENST00000346213 PITPNM2Q9BZ72 1349 aa19.99■□□□□ 0.79
RAB5C-201ENST00000346213 WDR33Q9C0J8 1336 aaKnown RBP19.99■□□□□ 0.79
RAB5C-201ENST00000346213 IL15P40933 162 aaPredicted RBP19.99■□□□□ 0.79
RAB5C-201ENST00000346213 SPDYE2BA6NHP3 402 aa19.98■□□□□ 0.79
RAB5C-201ENST00000346213 SPDYE6P0CI01 402 aa19.98■□□□□ 0.79
RAB5C-201ENST00000346213 TIMM10P62072 90 aa19.98■□□□□ 0.79
RAB5C-201ENST00000346213 SULF1Q8IWU6 871 aa19.98■□□□□ 0.79
RAB5C-201ENST00000346213 CDAN1Q8IWY9 1227 aa19.98■□□□□ 0.79
RAB5C-201ENST00000346213 FTSJ3Q8IY81 847 aaKnown RBP19.98■□□□□ 0.79
RAB5C-201ENST00000346213 OGFOD1Q8N543 542 aa19.98■□□□□ 0.79
RAB5C-201ENST00000346213 FBXO3Q9UK99 471 aa19.98■□□□□ 0.79
RAB5C-201ENST00000346213 CLRN2A0PK11 232 aa19.97■□□□□ 0.79
RAB5C-201ENST00000346213 MTMR14Q8NCE2 650 aa19.97■□□□□ 0.79
RAB5C-201ENST00000346213 CAPNS2Q96L46 248 aa19.97■□□□□ 0.79
RAB5C-201ENST00000346213 GRM1Q13255 1194 aa19.97■□□□□ 0.79
RAB5C-201ENST00000346213 GBA2Q9HCG7 927 aaPredicted RBP19.97■□□□□ 0.79
RAB5C-201ENST00000346213 CEP126Q9P2H0 1117 aa19.97■□□□□ 0.79
RAB5C-201ENST00000346213 IFIT1P09914 478 aaKnown RBP19.96■□□□□ 0.79
RAB5C-201ENST00000346213 SLC5A1P13866 664 aa19.96■□□□□ 0.79
RAB5C-201ENST00000346213 SSH3Q8TE77 659 aa19.96■□□□□ 0.79
RAB5C-201ENST00000346213 TTF2Q9UNY4 1162 aaKnown RBP19.96■□□□□ 0.79
RAB5C-201ENST00000346213 FAM155AB1AL88 458 aaPredicted RBP19.95■□□□□ 0.78
RAB5C-201ENST00000346213 CAVIN4Q5BKX8 364 aa19.95■□□□□ 0.78
RAB5C-201ENST00000346213 COG6Q9Y2V7 657 aa19.95■□□□□ 0.78
RAB5C-201ENST00000346213 FOXN1O15353 648 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 HUNKP57058 714 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 DLGAP5Q15398 846 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 CEP85Q6P2H3 762 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 VPS37DQ86XT2 251 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 A0A1B0GUL7 405 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 CCDC102BQ68D86 513 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 PI16Q6UXB8 463 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 PAXIP1Q6ZW49 1069 aaPredicted RBP19.94■□□□□ 0.78
RAB5C-201ENST00000346213 HDAC9Q9UKV0 1011 aa19.94■□□□□ 0.78
RAB5C-201ENST00000346213 ECM29Q5VYK3 1845 aa19.93■□□□□ 0.78
RAB5C-201ENST00000346213 PRDX5P30044 214 aa19.93■□□□□ 0.78
RAB5C-201ENST00000346213 CRKP46108 304 aa19.93■□□□□ 0.78
RAB5C-201ENST00000346213 RASGRF1Q13972 1273 aa19.93■□□□□ 0.78
RAB5C-201ENST00000346213 SIRT2Q8IXJ6 389 aa19.93■□□□□ 0.78
RAB5C-201ENST00000346213 TDRD3Q9H7E2 651 aaKnown RBP19.93■□□□□ 0.78
RAB5C-201ENST00000346213 WBP1LQ9NX94 342 aa19.93■□□□□ 0.78
RAB5C-201ENST00000346213 PAPPA2Q9BXP8 1791 aa19.92■□□□□ 0.78
RAB5C-201ENST00000346213 CACNB3P54284 484 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms