RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 TSPYL1Q9H0U9 437 aa24.84■■□□□ 1.57
TRIM3-201ENST00000345851 PTCD1O75127 700 aaKnown RBP24.83■■□□□ 1.57
TRIM3-201ENST00000345851 OAS2P29728 719 aaKnown RBP24.83■■□□□ 1.57
TRIM3-201ENST00000345851 ALDH8A1Q9H2A2 487 aaPredicted RBP24.83■■□□□ 1.57
TRIM3-201ENST00000345851 KSR2Q6VAB6 950 aa24.83■■□□□ 1.57
TRIM3-201ENST00000345851 COPS6Q7L5N1 327 aa24.83■■□□□ 1.57
TRIM3-201ENST00000345851 XAGE3Q8WTP9 111 aa24.83■■□□□ 1.57
TRIM3-201ENST00000345851 SEC62Q99442 399 aaKnown RBP24.83■■□□□ 1.57
TRIM3-201ENST00000345851 BTG4Q9NY30 223 aa24.83■■□□□ 1.57
TRIM3-201ENST00000345851 COL5A2P05997 1499 aaPredicted RBP24.83■■□□□ 1.57
TRIM3-201ENST00000345851 NRDCO43847 1150 aa24.83■■□□□ 1.56
TRIM3-201ENST00000345851 SASH3O75995 380 aa24.83■■□□□ 1.56
TRIM3-201ENST00000345851 SASH1O94885 1247 aa24.83■■□□□ 1.56
TRIM3-201ENST00000345851 CHGBP05060 677 aa24.83■■□□□ 1.56
TRIM3-201ENST00000345851 GYS2P54840 703 aa24.83■■□□□ 1.56
TRIM3-201ENST00000345851 DDX21Q9NR30 783 aaKnown RBP eCLIP24.83■■□□□ 1.56
TRIM3-201ENST00000345851 SIPA1L3O60292 1781 aaPredicted RBP24.83■■□□□ 1.56
TRIM3-201ENST00000345851 SCN11AQ9UI33 1791 aa24.82■■□□□ 1.56
TRIM3-201ENST00000345851 RIC3Q7Z5B4 369 aa24.82■■□□□ 1.56
TRIM3-201ENST00000345851 ERC1Q8IUD2 1116 aa24.82■■□□□ 1.56
TRIM3-201ENST00000345851 TXLNBQ8N3L3 684 aa24.82■■□□□ 1.56
TRIM3-201ENST00000345851 HMG20BQ9P0W2 317 aa24.82■■□□□ 1.56
TRIM3-201ENST00000345851 FANCGO15287 622 aa24.82■■□□□ 1.56
TRIM3-201ENST00000345851 TNNT3P45378 269 aaPredicted RBP24.82■■□□□ 1.56
TRIM3-201ENST00000345851 ZBTB9Q96C00 473 aa24.82■■□□□ 1.56
TRIM3-201ENST00000345851 TAF5LO75529 589 aa24.81■■□□□ 1.56
TRIM3-201ENST00000345851 PTPN21Q16825 1174 aa24.81■■□□□ 1.56
TRIM3-201ENST00000345851 ISM2Q6H9L7 571 aa24.81■■□□□ 1.56
TRIM3-201ENST00000345851 CCDC129Q6ZRS4 1044 aa24.81■■□□□ 1.56
TRIM3-201ENST00000345851 ZFP91Q96JP5 570 aaPredicted RBP24.81■■□□□ 1.56
TRIM3-201ENST00000345851 TMX1Q9H3N1 280 aa24.81■■□□□ 1.56
TRIM3-201ENST00000345851 NDUFB9Q9Y6M9 179 aa24.81■■□□□ 1.56
TRIM3-201ENST00000345851 MED23Q9ULK4 1368 aa24.81■■□□□ 1.56
TRIM3-201ENST00000345851 CCT2P78371 535 aaKnown RBP24.81■■□□□ 1.56
TRIM3-201ENST00000345851 OVOS2A0A0G2JMS6 1433 aa24.8■■□□□ 1.56
TRIM3-201ENST00000345851 TADA3O75528 432 aa24.8■■□□□ 1.56
TRIM3-201ENST00000345851 LMOD1P29536 600 aaPredicted RBP24.8■■□□□ 1.56
TRIM3-201ENST00000345851 EVCP57679 992 aa24.8■■□□□ 1.56
TRIM3-201ENST00000345851 GOLGA8FQ08AF8 430 aa24.8■■□□□ 1.56
TRIM3-201ENST00000345851 GOLGA8DPQ0D2H9 430 aa24.8■■□□□ 1.56
TRIM3-201ENST00000345851 IL2RBP14784 551 aa24.8■■□□□ 1.56
TRIM3-201ENST00000345851 GNL2Q13823 731 aaKnown RBP24.8■■□□□ 1.56
TRIM3-201ENST00000345851 G3BP1Q13283 466 aaKnown RBP eCLIP24.79■■□□□ 1.56
TRIM3-201ENST00000345851 C10orf67Q8IYJ2 551 aa24.79■■□□□ 1.56
TRIM3-201ENST00000345851 TRIM66O15016 1216 aa24.79■■□□□ 1.56
TRIM3-201ENST00000345851 MTX1Q13505 466 aa24.79■■□□□ 1.56
TRIM3-201ENST00000345851 PTPDC1A2A3K4 754 aa24.79■■□□□ 1.56
TRIM3-201ENST00000345851 CCDC191Q8NCU4 936 aa24.79■■□□□ 1.56
TRIM3-201ENST00000345851 NSUN7Q8NE18 718 aaKnown RBP24.79■■□□□ 1.56
TRIM3-201ENST00000345851 KLHDC4Q8TBB5 520 aa24.79■■□□□ 1.56
TRIM3-201ENST00000345851 NCOA5Q9HCD5 579 aaKnown RBP24.79■■□□□ 1.56
TRIM3-201ENST00000345851 LCMT1Q9UIC8 334 aa24.79■■□□□ 1.56
TRIM3-201ENST00000345851 PCDHA7Q9UN72 937 aa24.79■■□□□ 1.56
TRIM3-201ENST00000345851 TBC1D8O95759 1140 aa24.78■■□□□ 1.56
TRIM3-201ENST00000345851 NDUFA8P51970 172 aa24.78■■□□□ 1.56
TRIM3-201ENST00000345851 ZSCAN26Q16670 478 aa24.78■■□□□ 1.56
TRIM3-201ENST00000345851 MRPS27Q92552 414 aaKnown RBP24.78■■□□□ 1.56
TRIM3-201ENST00000345851 RSPH14Q9UHP6 348 aa24.78■■□□□ 1.56
TRIM3-201ENST00000345851 C5P01031 1676 aa24.78■■□□□ 1.56
TRIM3-201ENST00000345851 SNRPA1P09661 255 aaKnown RBP24.78■■□□□ 1.56
TRIM3-201ENST00000345851 SMC1AQ14683 1233 aaKnown RBP24.78■■□□□ 1.56
TRIM3-201ENST00000345851 TRIM65Q6PJ69 517 aa24.78■■□□□ 1.56
TRIM3-201ENST00000345851 ZNF396Q96N95 335 aaPredicted RBP24.78■■□□□ 1.56
TRIM3-201ENST00000345851 SNRKQ9NRH2 765 aa24.78■■□□□ 1.56
TRIM3-201ENST00000345851 KRT32Q14532 448 aa24.77■■□□□ 1.56
TRIM3-201ENST00000345851 FMR1NBQ8N0W7 255 aaPredicted RBP24.77■■□□□ 1.56
TRIM3-201ENST00000345851 UTP14AQ9BVJ6 771 aaKnown RBP24.77■■□□□ 1.56
TRIM3-201ENST00000345851 ATP1A3P13637 1013 aa24.77■■□□□ 1.56
TRIM3-201ENST00000345851 APOBRQ0VD83 1088 aa24.77■■□□□ 1.56
TRIM3-201ENST00000345851 MYD88Q99836 296 aa24.77■■□□□ 1.56
TRIM3-201ENST00000345851 KIAA1468Q9P260 1216 aa24.77■■□□□ 1.56
TRIM3-201ENST00000345851 PHLPP2Q6ZVD8 1323 aa24.77■■□□□ 1.56
TRIM3-201ENST00000345851 COL15A1P39059 1388 aa24.77■■□□□ 1.56
TRIM3-201ENST00000345851 GPS2Q13227 327 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 TSGA10IPQ3SY00 556 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 SMARCC2Q8TAQ2 1214 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 CTDNEP1O95476 244 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 IGKV5-2P06315 115 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 CYP21A2P08686 494 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 NAA16Q6N069 864 aaPredicted RBP24.76■■□□□ 1.55
TRIM3-201ENST00000345851 CARD10Q9BWT7 1032 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 PCDH11XQ9BZA7 1347 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 PCDH11YQ9BZA8 1340 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 ATP5J2-PTCD1G3V325 749 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 CC2D1AQ6P1N0 951 aaPredicted RBP24.76■■□□□ 1.55
TRIM3-201ENST00000345851 RASSF4Q9H2L5 321 aa24.76■■□□□ 1.55
TRIM3-201ENST00000345851 ADAMTS7Q9UKP4 1686 aa24.75■■□□□ 1.55
TRIM3-201ENST00000345851 EFCAB8A8MWE9 144 aa24.75■■□□□ 1.55
TRIM3-201ENST00000345851 PARP3Q9Y6F1 533 aa24.75■■□□□ 1.55
TRIM3-201ENST00000345851 MUM1L1Q5H9M0 696 aa24.75■■□□□ 1.55
TRIM3-201ENST00000345851 ILDR1Q86SU0 546 aaPredicted RBP24.75■■□□□ 1.55
TRIM3-201ENST00000345851 SF3A1Q15459 793 aaKnown RBP24.74■■□□□ 1.55
TRIM3-201ENST00000345851 LRRFIP1Q32MZ4 808 aaKnown RBP24.74■■□□□ 1.55
TRIM3-201ENST00000345851 SUCLG2Q96I99 432 aa24.74■■□□□ 1.55
TRIM3-201ENST00000345851 ADAMTS2O95450 1211 aa24.74■■□□□ 1.55
TRIM3-201ENST00000345851 DDX58O95786 925 aaKnown RBP24.74■■□□□ 1.55
TRIM3-201ENST00000345851 FANCCQ00597 558 aa24.74■■□□□ 1.55
TRIM3-201ENST00000345851 CCDC158Q5M9N0 1113 aa24.74■■□□□ 1.55
TRIM3-201ENST00000345851 ZNF330Q9Y3S2 320 aaPredicted RBP24.74■■□□□ 1.55
TRIM3-201ENST00000345851 MYO1CO00159 1063 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms