RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 FBXO18Q8NFZ0 1043 aa15.35■□□□□ 0.05
TRIO-202ENST00000344204 IQCGQ9H095 443 aaKnown RBP15.35■□□□□ 0.05
TRIO-202ENST00000344204 IGF1RP08069 1367 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 PDE1AP54750 535 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 SREK1Q8WXA9 508 aaKnown RBP15.34■□□□□ 0.05
TRIO-202ENST00000344204 HOMER2Q9NSB8 354 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 VCX3AQ9NNX9 186 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 NESP48681 1621 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 ARMC2Q8NEN0 867 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 FYB2Q5VWT5 728 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 IFT88Q13099 833 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 GBP7Q8N8V2 638 aaPredicted RBP15.34■□□□□ 0.05
TRIO-202ENST00000344204 ARHGEF2Q92974 986 aaKnown RBP15.34■□□□□ 0.05
TRIO-202ENST00000344204 TSPYL2Q9H2G4 693 aaPredicted RBP15.34■□□□□ 0.05
TRIO-202ENST00000344204 LMBR1Q8WVP7 490 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 SAAL1Q96ER3 474 aa15.34■□□□□ 0.05
TRIO-202ENST00000344204 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.05
TRIO-202ENST00000344204 PLEKHA4Q9H4M7 779 aa15.33■□□□□ 0.05
TRIO-202ENST00000344204 ARHGAP45Q92619 1136 aa15.33■□□□□ 0.05
TRIO-202ENST00000344204 SEC31AO94979 1220 aaKnown RBP15.33■□□□□ 0.04
TRIO-202ENST00000344204 RPSAP08865 295 aaKnown RBP15.33■□□□□ 0.04
TRIO-202ENST00000344204 RFC1P35251 1148 aaPredicted RBP15.33■□□□□ 0.04
TRIO-202ENST00000344204 MTMR3Q13615 1198 aa15.33■□□□□ 0.04
TRIO-202ENST00000344204 CCDC110Q8TBZ0 833 aa15.33■□□□□ 0.04
TRIO-202ENST00000344204 MTMR7Q9Y216 660 aa15.33■□□□□ 0.04
TRIO-202ENST00000344204 PPP1R7Q15435 360 aa15.33■□□□□ 0.04
TRIO-202ENST00000344204 RRAGBQ5VZM2 374 aa15.33■□□□□ 0.04
TRIO-202ENST00000344204 SND1Q7KZF4 910 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRIO-202ENST00000344204 FKBP4Q02790 459 aaKnown RBP eCLIP15.33■□□□□ 0.041e-6■■■■■ 33.9
TRIO-202ENST00000344204 E2F5Q15329 346 aa15.33■□□□□ 0.04
TRIO-202ENST00000344204 DISP3Q9P2K9 1392 aa15.33■□□□□ 0.04
TRIO-202ENST00000344204 ETF1P62495 437 aaKnown RBP15.33■□□□□ 0.04
TRIO-202ENST00000344204 COG7P83436 770 aa15.33■□□□□ 0.04
TRIO-202ENST00000344204 PDCD2Q16342 344 aaPredicted RBP15.33■□□□□ 0.04
TRIO-202ENST00000344204 JAKMIP2Q96AA8 810 aa15.33■□□□□ 0.04
TRIO-202ENST00000344204 MIER3Q7Z3K6 550 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 AK2P54819 239 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 SLC12A5Q9H2X9 1139 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 FAN1Q9Y2M0 1017 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 KRT13P13646 458 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 TAOK1Q7L7X3 1001 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 PPANQ9NQ55 473 aaKnown RBP15.32■□□□□ 0.04
TRIO-202ENST00000344204 ECHDC1Q9NTX5 307 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 CEP104O60308 925 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
TRIO-202ENST00000344204 ARHGEF12Q9NZN5 1544 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 ATP1A2P50993 1020 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 EXOC1Q9NV70 894 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 GNL3LQ9NVN8 582 aaKnown RBP15.32■□□□□ 0.04
TRIO-202ENST00000344204 SLC12A7Q9Y666 1083 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 RASSF2P50749 326 aa15.32■□□□□ 0.04
TRIO-202ENST00000344204 CCDC26Q8TAB7 109 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.31■□□□□ 0.04
TRIO-202ENST00000344204 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 PPFIA2O75334 1257 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 SLMAPQ14BN4 828 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 MARCKSP29966 332 aaPredicted RBP15.31■□□□□ 0.04
TRIO-202ENST00000344204 PPP1R13BQ96KQ4 1090 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 INSRP06213 1382 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 ZNF131P52739 623 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 NBPF6Q5VWK0 638 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 BRAPQ7Z569 592 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 NBPF5PQ86XG9 351 aaPredicted RBP15.31■□□□□ 0.04
TRIO-202ENST00000344204 NBPF4Q96M43 638 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 A0A087WZG4 1122 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 TLDC2A0PJX2 215 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 CHUKO15111 745 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 PHLDB3Q6NSJ2 640 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 BOLA2Q9H3K6 86 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 LONRF2Q1L5Z9 754 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 CROCCP2Q86T23 111 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 CACNA1FO60840 1977 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 DESP17661 470 aa15.31■□□□□ 0.04
TRIO-202ENST00000344204 ATP2B2Q01814 1243 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 BICC1Q9H694 974 aaKnown RBP15.3■□□□□ 0.04
TRIO-202ENST00000344204 NSD2O96028 1365 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 UTP11Q9Y3A2 253 aaKnown RBP15.3■□□□□ 0.04
TRIO-202ENST00000344204 OPHN1O60890 802 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 RNF40O75150 1001 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 BMP15O95972 392 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 SOGA3Q5TF21 947 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 GDAP1L1Q96MZ0 367 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 SYNRGQ9UMZ2 1314 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 CCDC170Q8IYT3 715 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 ANKRD24Q8TF21 1146 aa15.3■□□□□ 0.04
TRIO-202ENST00000344204 CALR3Q96L12 384 aaKnown RBP15.3■□□□□ 0.04
TRIO-202ENST00000344204 KIF1BO60333 1816 aa15.29■□□□□ 0.04
TRIO-202ENST00000344204 CCDC151A5D8V7 595 aa15.29■□□□□ 0.04
TRIO-202ENST00000344204 PSDA5PKW4 1024 aaPredicted RBP15.29■□□□□ 0.04
TRIO-202ENST00000344204 TMTC1Q8IUR5 882 aa15.29■□□□□ 0.04
TRIO-202ENST00000344204 NEK1Q96PY6 1258 aa15.29■□□□□ 0.04
TRIO-202ENST00000344204 ACTR5Q9H9F9 607 aaPredicted RBP15.29■□□□□ 0.04
TRIO-202ENST00000344204 BIVM-ERCC5R4GMW8 1640 aa15.29■□□□□ 0.04
TRIO-202ENST00000344204 THUMPD2Q9BTF0 503 aaKnown RBP15.29■□□□□ 0.04
TRIO-202ENST00000344204 DENND2CQ68D51 928 aa15.29■□□□□ 0.04
TRIO-202ENST00000344204 CCDC25Q86WR0 208 aa15.29■□□□□ 0.04
TRIO-202ENST00000344204 FAF1Q9UNN5 650 aaPredicted RBP15.29■□□□□ 0.04
TRIO-202ENST00000344204 AFMP43652 599 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms