RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 LSG1Q9H089 658 aaKnown RBP17.71■□□□□ 0.43
CXCL12-201ENST00000343575 UPF2Q9HAU5 1272 aaKnown RBP17.71■□□□□ 0.43
CXCL12-201ENST00000343575 DOCK2Q92608 1830 aa17.71■□□□□ 0.43
CXCL12-201ENST00000343575 RNF113AO15541 343 aaKnown RBP17.71■□□□□ 0.43
CXCL12-201ENST00000343575 REC8O95072 547 aa17.71■□□□□ 0.43
CXCL12-201ENST00000343575 VPS37DQ86XT2 251 aa17.71■□□□□ 0.43
CXCL12-201ENST00000343575 TDRD7Q8NHU6 1098 aaKnown RBP17.71■□□□□ 0.43
CXCL12-201ENST00000343575 KIF2CQ99661 725 aa17.71■□□□□ 0.43
CXCL12-201ENST00000343575 GNL3LQ9NVN8 582 aaKnown RBP17.71■□□□□ 0.43
CXCL12-201ENST00000343575 BECN1Q14457 450 aa17.7■□□□□ 0.42
CXCL12-201ENST00000343575 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
CXCL12-201ENST00000343575 WWC3Q9ULE0 1092 aa17.7■□□□□ 0.42
CXCL12-201ENST00000343575 MYH7P12883 1935 aa17.7■□□□□ 0.42
CXCL12-201ENST00000343575 C6orf229H3BNL8 230 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 SEMA3EO15041 775 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 TGFB2P61812 414 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 PTH1RQ03431 593 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 OSBP2Q969R2 916 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 ANO2Q9NQ90 1003 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
CXCL12-201ENST00000343575 DENND2AQ9ULE3 1009 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 PDS5AQ29RF7 1337 aaKnown RBP17.69■□□□□ 0.42
CXCL12-201ENST00000343575 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
CXCL12-201ENST00000343575 CCDC129Q6ZRS4 1044 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 RAD50Q92878 1312 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 CD209Q9NNX6 404 aa17.69■□□□□ 0.42
CXCL12-201ENST00000343575 TCRBV5S4A2TA0A5A2 114 aa17.68■□□□□ 0.42
CXCL12-201ENST00000343575 IDH1O75874 414 aaKnown RBP17.68■□□□□ 0.42
CXCL12-201ENST00000343575 ADD2P35612 726 aa17.68■□□□□ 0.42
CXCL12-201ENST00000343575 RTFDC1Q9BY42 306 aaPredicted RBP17.68■□□□□ 0.42
CXCL12-201ENST00000343575 CHD4Q14839 1912 aa17.68■□□□□ 0.42
CXCL12-201ENST00000343575 MYH13Q9UKX3 1938 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 C21orf2O43822 256 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 IL1R1P14778 569 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 MCMDC2Q4G0Z9 681 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 SLC9C2Q5TAH2 1124 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 ZNF804AQ7Z570 1209 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 ZNF384Q8TF68 577 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 PUS7LQ9H0K6 701 aaKnown RBP17.67■□□□□ 0.42
CXCL12-201ENST00000343575 HELLSQ9NRZ9 838 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 BRCA1P38398 1863 aaKnown RBP17.67■□□□□ 0.42
CXCL12-201ENST00000343575 MAST3O60307 1309 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 M0R2C6 588 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
CXCL12-201ENST00000343575 PDE6AP16499 860 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 JAG2Q9Y219 1238 aa17.67■□□□□ 0.42
CXCL12-201ENST00000343575 RIMBP2O15034 1052 aa17.66■□□□□ 0.42
CXCL12-201ENST00000343575 ZFYP08048 801 aaPredicted RBP17.66■□□□□ 0.42
CXCL12-201ENST00000343575 UBE3CQ15386 1083 aa17.66■□□□□ 0.42
CXCL12-201ENST00000343575 L1TD1Q5T7N2 865 aaKnown RBP17.66■□□□□ 0.42
CXCL12-201ENST00000343575 UBE2Q2Q8WVN8 375 aa17.66■□□□□ 0.42
CXCL12-201ENST00000343575 CD2APQ9Y5K6 639 aa17.66■□□□□ 0.42
CXCL12-201ENST00000343575 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
CXCL12-201ENST00000343575 ZNF532Q9HCE3 1301 aa17.65■□□□□ 0.42
CXCL12-201ENST00000343575 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
CXCL12-201ENST00000343575 APPBP2Q92624 585 aa17.65■□□□□ 0.42
CXCL12-201ENST00000343575 PALD1Q9ULE6 856 aa17.65■□□□□ 0.42
CXCL12-201ENST00000343575 FOXP2O15409 715 aa17.65■□□□□ 0.42
CXCL12-201ENST00000343575 FRAT2O75474 233 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-201ENST00000343575 CHAF1AQ13111 956 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-201ENST00000343575 WASHC4Q2M389 1173 aa17.65■□□□□ 0.42
CXCL12-201ENST00000343575 MAP4K1Q92918 833 aa17.65■□□□□ 0.42
CXCL12-201ENST00000343575 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
CXCL12-201ENST00000343575 PPP1R1BQ9UD71 204 aaPredicted RBP17.65■□□□□ 0.42
CXCL12-201ENST00000343575 ABCF2Q9UG63 623 aa17.65■□□□□ 0.42
CXCL12-201ENST00000343575 SLC4A3P48751 1232 aa17.64■□□□□ 0.41
CXCL12-201ENST00000343575 GRIK5Q16478 980 aa17.64■□□□□ 0.41
CXCL12-201ENST00000343575 VPS53Q5VIR6 699 aa17.64■□□□□ 0.41
CXCL12-201ENST00000343575 CC2D2BQ6DHV5 1058 aa17.64■□□□□ 0.41
CXCL12-201ENST00000343575 MAGEB6Q8N7X4 407 aa17.64■□□□□ 0.41
CXCL12-201ENST00000343575 PIM2Q9P1W9 311 aa17.64■□□□□ 0.41
CXCL12-201ENST00000343575 LRP2BPQ9P2M1 347 aa17.64■□□□□ 0.41
CXCL12-201ENST00000343575 SALL1Q9NSC2 1324 aa17.63■□□□□ 0.41
CXCL12-201ENST00000343575 PRDX5P30044 214 aa17.63■□□□□ 0.41
CXCL12-201ENST00000343575 HSPA4P34932 840 aa17.63■□□□□ 0.41
CXCL12-201ENST00000343575 MAP3K12Q12852 859 aa17.63■□□□□ 0.41
CXCL12-201ENST00000343575 LRRFIP1Q32MZ4 808 aaKnown RBP17.63■□□□□ 0.41
CXCL12-201ENST00000343575 ADGRA1Q86SQ6 560 aa17.63■□□□□ 0.41
CXCL12-201ENST00000343575 ZC3H12CQ9C0D7 883 aaKnown RBP17.63■□□□□ 0.41
CXCL12-201ENST00000343575 TMX4Q9H1E5 349 aaPredicted RBP17.63■□□□□ 0.41
CXCL12-201ENST00000343575 ZSCAN25Q6NSZ9 544 aa17.63■□□□□ 0.41
CXCL12-201ENST00000343575 KIAA1211Q6ZU35 1233 aa17.63■□□□□ 0.41
CXCL12-201ENST00000343575 IL17RAQ96F46 866 aa17.63■□□□□ 0.41
CXCL12-201ENST00000343575 COA1Q9GZY4 146 aa17.63■□□□□ 0.41
CXCL12-201ENST00000343575 NECTIN1Q15223 517 aa17.62■□□□□ 0.41
CXCL12-201ENST00000343575 DOK7Q18PE1 504 aa17.62■□□□□ 0.41
CXCL12-201ENST00000343575 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
CXCL12-201ENST00000343575 SPON1Q9HCB6 807 aa17.62■□□□□ 0.41
CXCL12-201ENST00000343575 RASEFQ8IZ41 740 aa17.61■□□□□ 0.41
CXCL12-201ENST00000343575 NSUN4Q96CB9 384 aaKnown RBP17.61■□□□□ 0.41
CXCL12-201ENST00000343575 RBM8AQ9Y5S9 174 aaKnown RBP17.61■□□□□ 0.41
CXCL12-201ENST00000343575 CCDC93Q567U6 631 aa17.61■□□□□ 0.41
CXCL12-201ENST00000343575 KLHL34Q8N239 644 aa17.61■□□□□ 0.41
CXCL12-201ENST00000343575 WDR66Q8TBY9 1149 aa17.61■□□□□ 0.41
CXCL12-201ENST00000343575 KCNB2Q92953 911 aa17.61■□□□□ 0.41
CXCL12-201ENST00000343575 EYA3Q99504 573 aa17.61■□□□□ 0.41
CXCL12-201ENST00000343575 KCNQ5Q9NR82 932 aa17.61■□□□□ 0.41
CXCL12-201ENST00000343575 RAI14Q9P0K7 980 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms