RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.74■■□□□ 1.07
TRA2B-202ENST00000342294 NEURL1BA8MQ27 555 aa21.73■■□□□ 1.07
TRA2B-202ENST00000342294 USP2O75604 605 aaPredicted RBP21.73■■□□□ 1.07
TRA2B-202ENST00000342294 CWF19L2Q2TBE0 894 aaKnown RBP21.73■■□□□ 1.07
TRA2B-202ENST00000342294 NBPF12Q5TAG4 269 aaPredicted RBP21.73■■□□□ 1.07
TRA2B-202ENST00000342294 ZNF333Q96JL9 665 aa21.73■■□□□ 1.07
TRA2B-202ENST00000342294 PLA2G12BQ9BX93 195 aa21.73■■□□□ 1.07
TRA2B-202ENST00000342294 ITGA6P23229 1130 aa21.72■■□□□ 1.07
TRA2B-202ENST00000342294 CHMP4AQ9BY43 222 aa21.72■■□□□ 1.07
TRA2B-202ENST00000342294 COLQQ9Y215 455 aaPredicted RBP21.72■■□□□ 1.07
TRA2B-202ENST00000342294 SPEF2Q9C093 1822 aa21.71■■□□□ 1.07
TRA2B-202ENST00000342294 SPDYE2BA6NHP3 402 aa21.71■■□□□ 1.07
TRA2B-202ENST00000342294 CSF1RP07333 972 aa21.71■■□□□ 1.07
TRA2B-202ENST00000342294 SPDYE6P0CI01 402 aa21.71■■□□□ 1.07
TRA2B-202ENST00000342294 C15orf52Q6ZUT6 534 aaKnown RBP21.71■■□□□ 1.07
TRA2B-202ENST00000342294 UBE3BQ7Z3V4 1068 aa21.71■■□□□ 1.07
TRA2B-202ENST00000342294 PRMT6Q96LA8 375 aaPredicted RBP21.71■■□□□ 1.07
TRA2B-202ENST00000342294 AOX1Q06278 1338 aa21.71■■□□□ 1.07
TRA2B-202ENST00000342294 CLRN2A0PK11 232 aa21.7■■□□□ 1.06
TRA2B-202ENST00000342294 IREB2P48200 963 aaKnown RBP21.7■■□□□ 1.06
TRA2B-202ENST00000342294 CALD1Q05682 793 aaKnown RBP21.7■■□□□ 1.06
TRA2B-202ENST00000342294 CHRNDQ07001 517 aa21.7■■□□□ 1.06
TRA2B-202ENST00000342294 NEXNQ0ZGT2 675 aa21.7■■□□□ 1.06
TRA2B-202ENST00000342294 CFAP100Q494V2 611 aa21.7■■□□□ 1.06
TRA2B-202ENST00000342294 ANKRD13AQ8IZ07 590 aa21.7■■□□□ 1.06
TRA2B-202ENST00000342294 TSPYL6Q8N831 410 aa21.7■■□□□ 1.06
TRA2B-202ENST00000342294 MS4A4AQ96JQ5 239 aa21.7■■□□□ 1.06
TRA2B-202ENST00000342294 TMEM106CQ9BVX2 250 aa21.7■■□□□ 1.06
TRA2B-202ENST00000342294 MYH3P11055 1940 aa21.7■■□□□ 1.06
TRA2B-202ENST00000342294 SNAP23O00161 211 aa21.69■■□□□ 1.06
TRA2B-202ENST00000342294 CASP7P55210 303 aa21.69■■□□□ 1.06
TRA2B-202ENST00000342294 MPHOSPH8Q99549 860 aa21.69■■□□□ 1.06
TRA2B-202ENST00000342294 CENPFP49454 3210 aa21.68■■□□□ 1.06
TRA2B-202ENST00000342294 MYO1BO43795 1136 aa21.68■■□□□ 1.06
TRA2B-202ENST00000342294 FKBP1AP62942 108 aaKnown RBP21.68■■□□□ 1.06
TRA2B-202ENST00000342294 APAF1O14727 1248 aa21.67■■□□□ 1.06
TRA2B-202ENST00000342294 IL1R1P14778 569 aa21.67■■□□□ 1.06
TRA2B-202ENST00000342294 KCNJ4P48050 445 aa21.67■■□□□ 1.06
TRA2B-202ENST00000342294 RASA3Q14644 834 aa21.67■■□□□ 1.06
TRA2B-202ENST00000342294 F8W031 263 aaPredicted RBP21.66■■□□□ 1.06
TRA2B-202ENST00000342294 GCKRQ14397 625 aa21.66■■□□□ 1.06
TRA2B-202ENST00000342294 OPTNQ96CV9 577 aa21.66■■□□□ 1.06
TRA2B-202ENST00000342294 VEZTQ9HBM0 779 aa21.66■■□□□ 1.06
TRA2B-202ENST00000342294 PTCH2Q9Y6C5 1203 aa21.66■■□□□ 1.06
TRA2B-202ENST00000342294 G2E3Q7L622 706 aa21.65■■□□□ 1.06
TRA2B-202ENST00000342294 NBPF11Q86T75 865 aa21.65■■□□□ 1.06
TRA2B-202ENST00000342294 BRI3BPQ8WY22 251 aa21.65■■□□□ 1.06
TRA2B-202ENST00000342294 ELP3Q9H9T3 547 aa21.65■■□□□ 1.06
TRA2B-202ENST00000342294 TAF5LO75529 589 aa21.64■■□□□ 1.05
TRA2B-202ENST00000342294 ARHGEF6Q15052 776 aa21.64■■□□□ 1.05
TRA2B-202ENST00000342294 SLC9C1Q4G0N8 1177 aa21.64■■□□□ 1.05
TRA2B-202ENST00000342294 OTUD5Q96G74 571 aa21.64■■□□□ 1.05
TRA2B-202ENST00000342294 BRCA2P51587 3418 aa21.64■■□□□ 1.05
TRA2B-202ENST00000342294 ECM29Q5VYK3 1845 aa21.64■■□□□ 1.05
TRA2B-202ENST00000342294 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.63■■□□□ 1.05
TRA2B-202ENST00000342294 HELBQ8NG08 1087 aaPredicted RBP21.63■■□□□ 1.05
TRA2B-202ENST00000342294 TEPSINQ96N21 525 aa21.63■■□□□ 1.05
TRA2B-202ENST00000342294 H0YGN5 161 aa21.62■■□□□ 1.05
TRA2B-202ENST00000342294 SPDYE2Q495Y8 402 aa21.62■■□□□ 1.05
TRA2B-202ENST00000342294 ZNF804AQ7Z570 1209 aa21.62■■□□□ 1.05
TRA2B-202ENST00000342294 CNKSR2Q8WXI2 1034 aa21.62■■□□□ 1.05
TRA2B-202ENST00000342294 STK31Q9BXU1 1019 aa21.62■■□□□ 1.05
TRA2B-202ENST00000342294 ZFYVE28Q9HCC9 887 aa21.62■■□□□ 1.05
TRA2B-202ENST00000342294 TRIOBPQ9H2D6 2365 aa21.61■■□□□ 1.05
TRA2B-202ENST00000342294 ANKRD18BA2A2Z9 1011 aa21.61■■□□□ 1.05
TRA2B-202ENST00000342294 TAF1CQ15572 869 aaPredicted RBP21.61■■□□□ 1.05
TRA2B-202ENST00000342294 SLC4A8Q2Y0W8 1093 aa21.61■■□□□ 1.05
TRA2B-202ENST00000342294 ZNF70Q9UC06 446 aaPredicted RBP21.61■■□□□ 1.05
TRA2B-202ENST00000342294 CEP290O15078 2479 aa21.6■■□□□ 1.05
TRA2B-202ENST00000342294 CCL15-CCL14A0A0B4J2E2 113 aa21.6■■□□□ 1.05
TRA2B-202ENST00000342294 GTF2A2P52657 109 aa21.6■■□□□ 1.05
TRA2B-202ENST00000342294 RBM5P52756 815 aaKnown RBP eCLIP21.6■■□□□ 1.05
TRA2B-202ENST00000342294 TNFAIP1Q13829 316 aa21.6■■□□□ 1.05
TRA2B-202ENST00000342294 CCL15Q16663 113 aa21.6■■□□□ 1.05
TRA2B-202ENST00000342294 CDAN1Q8IWY9 1227 aa21.6■■□□□ 1.05
TRA2B-202ENST00000342294 FAM43AQ8N2R8 423 aa21.6■■□□□ 1.05
TRA2B-202ENST00000342294 JAG2Q9Y219 1238 aa21.6■■□□□ 1.05
TRA2B-202ENST00000342294 FAM205AQ6ZU69 1335 aa21.59■■□□□ 1.05
TRA2B-202ENST00000342294 VGLL4Q14135 290 aa21.59■■□□□ 1.05
TRA2B-202ENST00000342294 OTOFQ9HC10 1997 aa21.59■■□□□ 1.05
TRA2B-202ENST00000342294 SLC4A2P04920 1241 aa21.58■■□□□ 1.05
TRA2B-202ENST00000342294 MAP3K9P80192 1104 aa21.58■■□□□ 1.05
TRA2B-202ENST00000342294 FOXO4P98177 505 aa21.58■■□□□ 1.05
TRA2B-202ENST00000342294 LINS1Q8NG48 757 aa21.58■■□□□ 1.05
TRA2B-202ENST00000342294 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.58■■□□□ 1.05
TRA2B-202ENST00000342294 MYH16Q9H6N6 1097 aa21.58■■□□□ 1.05
TRA2B-202ENST00000342294 TDRD3Q9H7E2 651 aaKnown RBP21.58■■□□□ 1.05
TRA2B-202ENST00000342294 SERPINA10Q9UK55 444 aa21.58■■□□□ 1.05
TRA2B-202ENST00000342294 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
TRA2B-202ENST00000342294 SH3TC2Q8TF17 1288 aa21.57■■□□□ 1.04
TRA2B-202ENST00000342294 TSR2Q969E8 191 aaKnown RBP21.57■■□□□ 1.04
TRA2B-202ENST00000342294 TLR2O60603 784 aa21.56■■□□□ 1.04
TRA2B-202ENST00000342294 MYCP01106 439 aaPredicted RBP21.56■■□□□ 1.04
TRA2B-202ENST00000342294 IFIT5Q13325 482 aaKnown RBP21.56■■□□□ 1.04
TRA2B-202ENST00000342294 DNAAF4Q8WXU2 420 aa21.56■■□□□ 1.04
TRA2B-202ENST00000342294 ARHGAP39Q9C0H5 1083 aa21.56■■□□□ 1.04
TRA2B-202ENST00000342294 LACTBP83111 547 aaPredicted RBP21.55■■□□□ 1.04
TRA2B-202ENST00000342294 FLIIQ13045 1269 aa21.55■■□□□ 1.04
TRA2B-202ENST00000342294 TWISTNBQ3B726 338 aaPredicted RBP21.55■■□□□ 1.04
TRA2B-202ENST00000342294 DZIP1LQ8IYY4 767 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms