RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 STK3Q13188 491 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 SND1Q7KZF4 910 aaKnown RBP eCLIP14.23□□□□□ -0.13
BRPF3-201ENST00000339717 IFT20Q8IY31 132 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 CLSTN2Q9H4D0 955 aa14.23□□□□□ -0.13
BRPF3-201ENST00000339717 C17orf50Q8WW18 174 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 JARID2Q92833 1246 aaPredicted RBP14.22□□□□□ -0.13
BRPF3-201ENST00000339717 PARD6BQ9BYG5 372 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 KCNG1Q9UIX4 513 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 PCDHB15Q9Y5E8 787 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 TTC22Q5TAA0 569 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 SPTY2D1Q68D10 685 aaPredicted RBP14.22□□□□□ -0.13
BRPF3-201ENST00000339717 RGL1Q9NZL6 768 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 PCYT1AP49585 367 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 PPP1R9AQ9ULJ8 1098 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 GRIN2BQ13224 1484 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 SLC44A4Q53GD3 710 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 MFN1Q8IWA4 741 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 ZNF280CQ8ND82 737 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 DNAI2Q9GZS0 605 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 PLEKHA4Q9H4M7 779 aa14.22□□□□□ -0.13
BRPF3-201ENST00000339717 PPANQ9NQ55 473 aaKnown RBP14.22□□□□□ -0.13
BRPF3-201ENST00000339717 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.22□□□□□ -0.13
BRPF3-201ENST00000339717 HIBCHQ6NVY1 386 aaPredicted RBP14.21□□□□□ -0.13
BRPF3-201ENST00000339717 VSIG1Q86XK7 387 aa14.21□□□□□ -0.13
BRPF3-201ENST00000339717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.21□□□□□ -0.13
BRPF3-201ENST00000339717 THUMPD2Q9BTF0 503 aaKnown RBP14.21□□□□□ -0.13
BRPF3-201ENST00000339717 EID1Q9Y6B2 187 aa14.21□□□□□ -0.13
BRPF3-201ENST00000339717 BRD1O95696 1058 aa14.21□□□□□ -0.13
BRPF3-201ENST00000339717 YY1P25490 414 aa14.21□□□□□ -0.13
BRPF3-201ENST00000339717 RALYLQ86SE5 291 aaKnown RBP14.21□□□□□ -0.13
BRPF3-201ENST00000339717 ZNF653Q96CK0 615 aa14.21□□□□□ -0.13
BRPF3-201ENST00000339717 MYO1BO43795 1136 aa14.21□□□□□ -0.13
BRPF3-201ENST00000339717 FBXW10Q5XX13 1052 aa14.21□□□□□ -0.13
BRPF3-201ENST00000339717 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
BRPF3-201ENST00000339717 STXBP3O00186 592 aa14.21□□□□□ -0.14
BRPF3-201ENST00000339717 OPHN1O60890 802 aa14.21□□□□□ -0.14
BRPF3-201ENST00000339717 PAK2Q13177 524 aa14.21□□□□□ -0.14
BRPF3-201ENST00000339717 RCSD1Q6JBY9 416 aa14.21□□□□□ -0.14
BRPF3-201ENST00000339717 DYTNA2CJ06 578 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 BIN1O00499 593 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 SCRN1Q12765 414 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 MYO1EQ12965 1108 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 CFAP157Q5JU67 520 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 RINLQ6ZS11 566 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 CNGA4Q8IV77 575 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 PPP1R13BQ96KQ4 1090 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 STK38LQ9Y2H1 464 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 NME8Q8N427 588 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 AATFQ9NY61 560 aaKnown RBP eCLIP14.2□□□□□ -0.14
BRPF3-201ENST00000339717 KIF21BO75037 1637 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 PAX7P23759 505 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 IRX4P78413 519 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 SPAG1Q07617 926 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 BICD1Q96G01 975 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 TNNC1P63316 161 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 CASP8Q14790 479 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 FKBP15Q5T1M5 1219 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 CCDC197Q8NCU1 140 aa14.2□□□□□ -0.14
BRPF3-201ENST00000339717 RUFY3Q7L099 469 aa14.19□□□□□ -0.14
BRPF3-201ENST00000339717 HOOK3Q86VS8 718 aa14.19□□□□□ -0.14
BRPF3-201ENST00000339717 MSL3Q8N5Y2 521 aaKnown RBP14.19□□□□□ -0.14
BRPF3-201ENST00000339717 ZNF483Q8TF39 744 aaPredicted RBP14.19□□□□□ -0.14
BRPF3-201ENST00000339717 MRPS27Q92552 414 aaKnown RBP14.19□□□□□ -0.14
BRPF3-201ENST00000339717 ZC4H2Q9NQZ6 224 aa14.19□□□□□ -0.14
BRPF3-201ENST00000339717 PAPOLAP51003 745 aaKnown RBP14.19□□□□□ -0.14
BRPF3-201ENST00000339717 TMEM132AQ24JP5 1023 aa14.19□□□□□ -0.14
BRPF3-201ENST00000339717 PACS2Q86VP3 889 aa14.19□□□□□ -0.14
BRPF3-201ENST00000339717 CAPZA3Q96KX2 299 aa14.19□□□□□ -0.14
BRPF3-201ENST00000339717 UBAP1Q9NZ09 502 aa14.19□□□□□ -0.14
BRPF3-201ENST00000339717 LMOD1P29536 600 aaPredicted RBP14.19□□□□□ -0.14
BRPF3-201ENST00000339717 JAKMIP2Q96AA8 810 aa14.19□□□□□ -0.14
BRPF3-201ENST00000339717 SGSM2O43147 1006 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 ATP5DP30049 168 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 MTMR3Q13615 1198 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 SH3BP1Q9Y3L3 701 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 AKR1B15C9JRZ8 316 aaPredicted RBP14.18□□□□□ -0.14
BRPF3-201ENST00000339717 INAQ16352 499 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 IFI16Q16666 785 aaKnown RBP14.18□□□□□ -0.14
BRPF3-201ENST00000339717 RRP36Q96EU6 259 aaKnown RBP14.18□□□□□ -0.14
BRPF3-201ENST00000339717 ST7Q9NRC1 585 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 ST5P78524 1137 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 ZBTB16Q05516 673 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 KIF5AQ12840 1032 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 IQCDQ96DY2 449 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 ZCCHC17Q9NP64 241 aaKnown RBP14.18□□□□□ -0.14
BRPF3-201ENST00000339717 TUBA8Q9NY65 449 aaPredicted RBP14.18□□□□□ -0.14
BRPF3-201ENST00000339717 SMIM23A6NLE4 172 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 MAFGO15525 162 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
BRPF3-201ENST00000339717 KANK3Q6NY19 840 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 AMOTL1Q8IY63 956 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 SPDYE1Q8NFV5 336 aaPredicted RBP14.18□□□□□ -0.14
BRPF3-201ENST00000339717 TDRD7Q8NHU6 1098 aaKnown RBP14.18□□□□□ -0.14
BRPF3-201ENST00000339717 CDC23Q9UJX2 597 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
BRPF3-201ENST00000339717 MEFVO15553 781 aaPredicted RBP14.17□□□□□ -0.14
BRPF3-201ENST00000339717 PECAM1P16284 738 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms