RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 HNRNPCP07910 306 aaKnown RBP eCLIP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 NUDT7P0C024 238 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 SKOR1P84550 965 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 DMPKQ09013 629 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 TTLL7Q6ZT98 887 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 APPL1Q9UKG1 709 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 MAGED1Q9Y5V3 778 aaPredicted RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 RCCD1A6NED2 376 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 MIER3Q7Z3K6 550 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 FAM9CQ8IZT9 166 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 LRRC43Q8N309 656 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 C1orf131Q8NDD1 294 aaKnown RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 RSRC1Q96IZ7 334 aaKnown RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CXorf56Q9H5V9 222 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CHCHD3Q9NX63 227 aaKnown RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 NBNO60934 754 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 APOA4P06727 396 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 PYGMP11217 842 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 RRM1P23921 792 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 SATB1Q01826 763 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 NBPF10Q6P3W6 841 aaKnown RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 RAB11FIP4Q86YS3 637 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 C17orf53Q8N3J3 647 aaPredicted RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CEP120Q8N960 986 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 HNRNPLLQ8WVV9 542 aaKnown RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 EPSTI1Q96J88 318 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 GAS2L1Q99501 681 aaPredicted RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 EHD4Q9H223 541 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 KCNG1Q9UIX4 513 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 DCTN4Q9UJW0 460 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 PHACTR2O75167 634 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 KRT38O76015 456 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 ASMTLO95671 621 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 LLGL1Q15334 1064 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 WDR63Q8IWG1 891 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CLASRPQ8N2M8 674 aaKnown RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 EPS8L1Q8TE68 723 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 TSR2Q969E8 191 aaKnown RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 AS3MTQ9HBK9 375 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 UNCXA6NJT0 531 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 H3BQ06 376 aaPredicted RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CFHP08603 1231 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 SRGAP2CP0DJJ0 459 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 APBA1Q02410 837 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 NBPF9Q3BBW0 867 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CFAP70Q5T0N1 1121 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CPLX4Q7Z7G2 160 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CCDC63Q8NA47 563 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 MTMR14Q8NCE2 650 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 PHACTR3Q96KR7 559 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 GDAP1L1Q96MZ0 367 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 PPP1R9BQ96SB3 815 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 NBPF3Q9H094 633 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 ZKSCAN5Q9Y2L8 839 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 LRCH1Q9Y2L9 728 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 NCAPD3P42695 1498 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 GJC2Q5T442 439 aaPredicted RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 NAA16Q6N069 864 aaPredicted RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 ANKRD18AQ8IVF6 992 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CAGE1Q8TC20 777 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 ZNF830Q96NB3 372 aaPredicted RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 CCDC94Q9BW85 323 aaPredicted RBP3.68□□□□□ -1.82
SOCS4-201ENST00000339298 IL1RAPL2Q9NP60 686 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 NCDNQ9UBB6 729 aa3.68□□□□□ -1.82
SOCS4-201ENST00000339298 UQCRHLA0A096LP55 91 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 UQCRHP07919 91 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 PTPN5P54829 565 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 LRRC23Q53EV4 343 aaPredicted RBP3.67□□□□□ -1.82
SOCS4-201ENST00000339298 HSP90AA4PQ58FG1 418 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 TTC39BQ5VTQ0 682 aaPredicted RBP3.67□□□□□ -1.82
SOCS4-201ENST00000339298 IL31Q6EBC2 164 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 C11orf74Q86VG3 221 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 LIX1LQ8IVB5 337 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 TRIM22Q8IYM9 498 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 GOLGA1Q92805 767 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 ARMT1Q9H993 441 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 CWC25Q9NXE8 425 aaPredicted RBP3.67□□□□□ -1.82
SOCS4-201ENST00000339298 SEPT10Q9P0V9 454 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 PQBP1O60828 265 aaKnown RBP3.67□□□□□ -1.82
SOCS4-201ENST00000339298 RNGTTO60942 597 aaKnown RBP3.67□□□□□ -1.82
SOCS4-201ENST00000339298 KATNA1O75449 491 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 TMOD1P28289 359 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 GUCY2FP51841 1108 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 DHX8Q14562 1220 aaKnown RBP3.67□□□□□ -1.82
SOCS4-201ENST00000339298 RPS6KA2Q15349 733 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 ZNF438Q7Z4V0 828 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 CCDC148Q8NFR7 591 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 FBRSQ9HAH7 460 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 EXOC1Q9NV70 894 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 TMOD2Q9NZR1 351 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 C6orf203Q9P0P8 240 aaPredicted RBP3.67□□□□□ -1.82
SOCS4-201ENST00000339298 PRAMEF27A3QJZ7 478 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 ATP5J2-PTCD1G3V325 749 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 ZEB2O60315 1214 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 KCNJ5P48544 419 aa3.67□□□□□ -1.82
SOCS4-201ENST00000339298 RNASE9P60153 205 aaKnown RBP3.67□□□□□ -1.82
SOCS4-201ENST00000339298 AKAP17AQ02040 695 aaKnown RBP3.67□□□□□ -1.82
SOCS4-201ENST00000339298 DMTNQ08495 405 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms