RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ZSCAN25Q6NSZ9 544 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 MPNDQ8N594 471 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 IPO9Q96P70 1041 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 KIF13BQ9NQT8 1826 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 CCDC171Q6TFL3 1326 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 DLEC1Q9Y238 1755 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 SEMA3EO15041 775 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 MCCP23508 829 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 WASHC4Q2M389 1173 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 SLC9C2Q5TAH2 1124 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 DDRGK1Q96HY6 314 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
CDK5RAP3-201ENST00000338399 ADD2P35612 726 aa17.74■□□□□ 0.43
CDK5RAP3-201ENST00000338399 DPP8Q6V1X1 898 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-201ENST00000338399 ZNF804AQ7Z570 1209 aa17.74■□□□□ 0.43
CDK5RAP3-201ENST00000338399 OSBP2Q969R2 916 aa17.74■□□□□ 0.43
CDK5RAP3-201ENST00000338399 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
CDK5RAP3-201ENST00000338399 MAP3K12Q12852 859 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 APPBP2Q92624 585 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 LRP2BPQ9P2M1 347 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 ABCF2Q9UG63 623 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 MAST3O60307 1309 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 DUOX1Q9NRD9 1551 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 A0A0G2JLW4 131 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 M0R2C6 588 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 DPEP1P16444 411 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 PDE6AP16499 860 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 CHAF1AQ13111 956 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 PALD1Q9ULE6 856 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 ZNF532Q9HCE3 1301 aa17.73■□□□□ 0.43
CDK5RAP3-201ENST00000338399 HSPA4P34932 840 aa17.72■□□□□ 0.43
CDK5RAP3-201ENST00000338399 UBE3CQ15386 1083 aa17.72■□□□□ 0.43
CDK5RAP3-201ENST00000338399 MAGEB6Q8N7X4 407 aa17.72■□□□□ 0.43
CDK5RAP3-201ENST00000338399 TDRD7Q8NHU6 1098 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-201ENST00000338399 MAP4K1Q92918 833 aa17.72■□□□□ 0.43
CDK5RAP3-201ENST00000338399 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-201ENST00000338399 PDS5AQ29RF7 1337 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-201ENST00000338399 RIMBP2O15034 1052 aa17.71■□□□□ 0.43
CDK5RAP3-201ENST00000338399 CD209Q9NNX6 404 aa17.71■□□□□ 0.43
CDK5RAP3-201ENST00000338399 JAG2Q9Y219 1238 aa17.71■□□□□ 0.43
CDK5RAP3-201ENST00000338399 RBM8AQ9Y5S9 174 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-201ENST00000338399 TCRBV5S4A2TA0A5A2 114 aa17.71■□□□□ 0.43
CDK5RAP3-201ENST00000338399 ZBTB22O15209 634 aa17.71■□□□□ 0.43
CDK5RAP3-201ENST00000338399 KCNA3P22001 575 aa17.71■□□□□ 0.43
CDK5RAP3-201ENST00000338399 TTLL6Q8N841 843 aa17.7■□□□□ 0.42
CDK5RAP3-201ENST00000338399 C7orf43Q8WVR3 580 aa17.7■□□□□ 0.42
CDK5RAP3-201ENST00000338399 RAI14Q9P0K7 980 aa17.7■□□□□ 0.42
CDK5RAP3-201ENST00000338399 ANAPC15P60006 121 aa17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 VPS53Q5VIR6 699 aa17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 ILDR2Q71H61 639 aa17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 SGIP1Q9BQI5 828 aa17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 ZC3H12CQ9C0D7 883 aaKnown RBP17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 C21orf2O43822 256 aa17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 IL1R1P14778 569 aa17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 KIAA1551Q9HCM1 1747 aa17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 PPP1R1BQ9UD71 204 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-201ENST00000338399 GPAA1O43292 621 aa17.68■□□□□ 0.42
CDK5RAP3-201ENST00000338399 TGFB2P61812 414 aa17.68■□□□□ 0.42
CDK5RAP3-201ENST00000338399 RABEP1Q15276 862 aa17.68■□□□□ 0.42
CDK5RAP3-201ENST00000338399 ERICH6Q7L0X2 663 aa17.68■□□□□ 0.42
CDK5RAP3-201ENST00000338399 RASEFQ8IZ41 740 aa17.68■□□□□ 0.42
CDK5RAP3-201ENST00000338399 SNX14Q9Y5W7 946 aa17.68■□□□□ 0.42
CDK5RAP3-201ENST00000338399 CHD4Q14839 1912 aa17.68■□□□□ 0.42
CDK5RAP3-201ENST00000338399 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
CDK5RAP3-201ENST00000338399 HSPD1P10809 573 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-201ENST00000338399 SLC4A3P48751 1232 aa17.67■□□□□ 0.42
CDK5RAP3-201ENST00000338399 CREB3L3Q68CJ9 461 aa17.67■□□□□ 0.42
CDK5RAP3-201ENST00000338399 WDR66Q8TBY9 1149 aa17.67■□□□□ 0.42
CDK5RAP3-201ENST00000338399 EYA3Q99504 573 aa17.67■□□□□ 0.42
CDK5RAP3-201ENST00000338399 PTGER2P43116 358 aa17.67■□□□□ 0.42
CDK5RAP3-201ENST00000338399 CC2D2BQ6DHV5 1058 aa17.67■□□□□ 0.42
CDK5RAP3-201ENST00000338399 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
CDK5RAP3-201ENST00000338399 DSCC1Q9BVC3 393 aa17.67■□□□□ 0.42
CDK5RAP3-201ENST00000338399 CYP7A1P22680 504 aa17.66■□□□□ 0.42
CDK5RAP3-201ENST00000338399 PRDX5P30044 214 aa17.66■□□□□ 0.42
CDK5RAP3-201ENST00000338399 BECN1Q14457 450 aa17.66■□□□□ 0.42
CDK5RAP3-201ENST00000338399 DOK7Q18PE1 504 aa17.66■□□□□ 0.42
CDK5RAP3-201ENST00000338399 AIDAQ96BJ3 306 aa17.66■□□□□ 0.42
CDK5RAP3-201ENST00000338399 IL17RAQ96F46 866 aa17.66■□□□□ 0.42
CDK5RAP3-201ENST00000338399 COA1Q9GZY4 146 aa17.66■□□□□ 0.42
CDK5RAP3-201ENST00000338399 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP3-201ENST00000338399 SALL1Q9NSC2 1324 aa17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 SLC27A2O14975 620 aa17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 ZGPATQ8N5A5 531 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 KCNB2Q92953 911 aa17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 RTFDC1Q9BY42 306 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 TBC1D2Q9BYX2 928 aa17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 PIM2Q9P1W9 311 aa17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 DAXXQ9UER7 740 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 SNED1Q8TER0 1413 aa17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 MBD4O95243 580 aa17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 NAA16Q6N069 864 aaPredicted RBP17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 ADGRA1Q86SQ6 560 aa17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 ZNF384Q8TF68 577 aa17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 NSUN4Q96CB9 384 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-201ENST00000338399 G3V3G9 751 aa17.64■□□□□ 0.41
CDK5RAP3-201ENST00000338399 FOXP2O15409 715 aa17.64■□□□□ 0.41
CDK5RAP3-201ENST00000338399 ZKSCAN1P17029 563 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms