RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CTAGE4Q8IX94 777 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 MAGEB6Q8N7X4 407 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 TMEM87BQ96K49 555 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 IFNKQ9P0W0 207 aa19.47■□□□□ 0.71
TRAPPC11-201ENST00000334690 TMCO5BA8MYB1 307 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 HELBQ8NG08 1087 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 APPBP2Q92624 585 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 KDM5AP29375 1690 aaKnown RBP19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 NOP2P46087 812 aaKnown RBP19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 SPECC1Q5M775 1068 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 PPP4R3AQ6IN85 833 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 ZNF521Q96K83 1311 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 MYL5Q02045 173 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 HEATR3Q7Z4Q2 680 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 SSH3Q8TE77 659 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 SPAG5Q96R06 1193 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 IQUBQ8NA54 791 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 FAM227BQ96M60 508 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 TAOK3Q9H2K8 898 aa19.46■□□□□ 0.71
TRAPPC11-201ENST00000334690 ELP1O95163 1332 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 SPDYE4A6NLX3 237 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 RILPL1Q5EBL4 403 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 DYDC1Q8WWB3 177 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 NYXQ9GZU5 481 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 LMBRD1Q9NUN5 540 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 ANKRD62A6NC57 917 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 KRT2P35908 639 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 EIF4A1P60842 406 aaKnown RBP19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 GCKRQ14397 625 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 CTR9Q6PD62 1173 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 C6orf50Q9HD87 102 aa19.45■□□□□ 0.7
TRAPPC11-201ENST00000334690 TBCAO75347 108 aaKnown RBP19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 BRD1O95696 1058 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 ASIC1P78348 528 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 ST5P78524 1137 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 TPTE2Q6XPS3 522 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 SSH2Q76I76 1423 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 NAPAP54920 295 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 CCDC172P0C7W6 258 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 EZRP15311 586 aaKnown RBP19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 PLCG2P16885 1265 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 SLC4A8Q2Y0W8 1093 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 SUCLG2Q96I99 432 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 FEZ1Q99689 392 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 USP44Q9H0E7 712 aa19.44■□□□□ 0.7
TRAPPC11-201ENST00000334690 A0A1B0GVL5 298 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 SLC52A2Q9HAB3 445 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 ANGEL1Q9UNK9 670 aaKnown RBP19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 KDM5DQ9BY66 1539 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 GSTTP1A0A1W2PQM5 241 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 MYO1BO43795 1136 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 KRT83P78385 493 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 MIGA1Q8NAN2 632 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 FAM89AQ96GI7 184 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 GTF2F1P35269 517 aaKnown RBP eCLIP19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 CEP112Q8N8E3 955 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 KLHDC4Q8TBB5 520 aa19.43■□□□□ 0.7
TRAPPC11-201ENST00000334690 CLSTN2Q9H4D0 955 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 GSPT1P15170 499 aaKnown RBP19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 PAF1Q8N7H5 531 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 KDM5CP41229 1560 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 MBD4O95243 580 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 MICALCLQ6ZW33 695 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 MCM9Q9NXL9 1143 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 KRT86O43790 486 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 GNA11P29992 359 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 CCDC129Q6ZRS4 1044 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 SYCP3Q8IZU3 236 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 CCDC113Q9H0I3 377 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 SH3TC1Q8TE82 1336 aa19.42■□□□□ 0.7
TRAPPC11-201ENST00000334690 ZNF804AQ7Z570 1209 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 ACSBG1Q96GR2 724 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 RBM28Q9NW13 759 aaKnown RBP19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 CTAGE9A4FU28 777 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 TACC1O75410 805 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 TUBBP07437 444 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 ANO1Q5XXA6 986 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 LEO1Q8WVC0 666 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 GCOM1H8Y6P7 765 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 MYZAPP0CAP1 466 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 NEO1Q92859 1461 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 BICDL2A1A5D9 508 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 FAM173BQ6P4H8 233 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 ANKRD2Q9GZV1 360 aa19.41■□□□□ 0.7
TRAPPC11-201ENST00000334690 ATP5JP18859 108 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 KIF5AQ12840 1032 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 KRT79Q5XKE5 535 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 PLEKHF1Q96S99 279 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 TMEM2Q9UHN6 1383 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 ERVK-7P63135 1459 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 RXRAP19793 462 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 PARP10Q53GL7 1025 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 DTHD1Q6ZMT9 781 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 LMAN1P49257 510 aa19.4■□□□□ 0.7
TRAPPC11-201ENST00000334690 GPAA1O43292 621 aa19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 MAP2K1Q02750 393 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 PUM3Q15397 648 aaKnown RBP19.39■□□□□ 0.69
TRAPPC11-201ENST00000334690 CNGA4Q8IV77 575 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms