RNA–Protein interactions for RNA: ENST00000334121.10

SREK1-202, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SREK1, Length 6,781 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-202ENST00000334121 PRDM1O75626 825 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 ABL1P00519 1130 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 TEX11Q8IYF3 940 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 TMX3Q96JJ7 454 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 NACA2Q9H009 215 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 TIMM10P62072 90 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 IFT81Q8WYA0 676 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
SREK1-202ENST00000334121 TMOD4Q9NZQ9 345 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 UBXN1Q04323 297 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 MTHFSDQ2M296 383 aaKnown RBP12.63□□□□□ -0.39
SREK1-202ENST00000334121 FAM47CQ5HY64 1035 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 FBF1Q8TES7 1133 aa12.63□□□□□ -0.39
SREK1-202ENST00000334121 CCT6AP40227 531 aaKnown RBP12.62□□□□□ -0.39
SREK1-202ENST00000334121 MCM6Q14566 821 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 MAK16Q9BXY0 300 aaKnown RBP12.62□□□□□ -0.39
SREK1-202ENST00000334121 TLDC2A0PJX2 215 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 VWA3AA6NCI4 1184 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 HSF2BPO75031 334 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 KRT2P35908 639 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 CNBD1Q8NA66 436 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 ARMT1Q9H993 441 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
SREK1-202ENST00000334121 APBA3O96018 575 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 FAM160A1Q05DH4 1040 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
SREK1-202ENST00000334121 IFRD2Q12894 506 aaPredicted RBP12.62□□□□□ -0.39
SREK1-202ENST00000334121 LARGE2Q8N3Y3 721 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 STK32BQ9NY57 414 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
SREK1-202ENST00000334121 MBD4O95243 580 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 USP48Q86UV5 1035 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 PAGR1Q9BTK6 254 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 LZTFL1Q9NQ48 299 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 DDX19AQ9NUU7 478 aaKnown RBP12.61□□□□□ -0.39
SREK1-202ENST00000334121 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.61□□□□□ -0.39
SREK1-202ENST00000334121 CCNT1O60563 726 aaKnown RBP12.61□□□□□ -0.39
SREK1-202ENST00000334121 PPANQ9NQ55 473 aaKnown RBP12.61□□□□□ -0.39
SREK1-202ENST00000334121 CEP112Q8N8E3 955 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 IFT140Q96RY7 1462 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 NPHP3Q7Z494 1330 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 TTC21BQ7Z4L5 1316 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 CCDC6Q16204 474 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 KSR1Q8IVT5 923 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 GUCA1BQ9UMX6 200 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.61□□□□□ -0.39
SREK1-202ENST00000334121 CCDC117Q8IWD4 279 aaPredicted RBP12.61□□□□□ -0.39
SREK1-202ENST00000334121 AGTPBP1Q9UPW5 1226 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 B4E1Z4 1266 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 PPP4R3BQ5MIZ7 849 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 PPIP5K1Q6PFW1 1433 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 TIGD1Q96MW7 591 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 PFDN4Q9NQP4 134 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 DNAI1Q9UI46 699 aa12.61□□□□□ -0.39
SREK1-202ENST00000334121 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
SREK1-202ENST00000334121 CCDC155Q8N6L0 562 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 KCNK9Q9NPC2 374 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 ZBTB16Q05516 673 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 KRT19P08727 400 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 PARP1P09874 1014 aaKnown RBP12.6□□□□□ -0.39
SREK1-202ENST00000334121 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 LRRC45Q96CN5 670 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 RMND1Q9NWS8 449 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 TXNDC16Q9P2K2 825 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 KANK3Q6NY19 840 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 NOP9Q86U38 636 aaKnown RBP12.6□□□□□ -0.39
SREK1-202ENST00000334121 IVNS1ABPQ9Y6Y0 642 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 TSPYL6Q8N831 410 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 PLEKHA4Q9H4M7 779 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 FAM169AQ9Y6X4 670 aa12.6□□□□□ -0.39
SREK1-202ENST00000334121 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 CNNM2Q9H8M5 875 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 DACT1Q9NYF0 836 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 ZSCAN22P10073 491 aaPredicted RBP12.59□□□□□ -0.39
SREK1-202ENST00000334121 BMS1Q14692 1282 aaKnown RBP12.59□□□□□ -0.39
SREK1-202ENST00000334121 ZSCAN23Q3MJ62 389 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 MYL10Q9BUA6 226 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 DAPK3O43293 454 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 SMC1BQ8NDV3 1235 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 PPP1R7Q15435 360 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 NCAPH2Q6IBW4 605 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
SREK1-202ENST00000334121 PSMA7O14818 248 aa12.58□□□□□ -0.39
SREK1-202ENST00000334121 SNX16P57768 344 aa12.58□□□□□ -0.39
SREK1-202ENST00000334121 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.39
SREK1-202ENST00000334121 DTHD1Q6ZMT9 781 aa12.58□□□□□ -0.39
SREK1-202ENST00000334121 CTNND2Q9UQB3 1225 aa12.58□□□□□ -0.39
SREK1-202ENST00000334121 CEP83Q9Y592 693 aa12.58□□□□□ -0.39
SREK1-202ENST00000334121 TOPBP1Q92547 1522 aa12.58□□□□□ -0.4
SREK1-202ENST00000334121 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.4
SREK1-202ENST00000334121 CKAP4Q07065 602 aaKnown RBP12.58□□□□□ -0.4
SREK1-202ENST00000334121 ARHGAP27Q6ZUM4 889 aa12.58□□□□□ -0.4
SREK1-202ENST00000334121 SELENOOQ9BVL4 669 aa12.58□□□□□ -0.4
SREK1-202ENST00000334121 USTQ9Y2C2 406 aa12.58□□□□□ -0.4
SREK1-202ENST00000334121 RHOXF2BP0C7M4 288 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms