RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 FBXW10Q5XX13 1052 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 FSIP1Q8NA03 581 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 GDAP1L1Q96MZ0 367 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 POLR3DP05423 398 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-202ENST00000333611 MUM1L1Q5H9M0 696 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 CALR3Q96L12 384 aaKnown RBP13.67□□□□□ -0.22
LIMK2-202ENST00000333611 CCDC85AQ96PX6 553 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-202ENST00000333611 KDRP35968 1356 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 PEAK1Q9H792 1746 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 SASH3O75995 380 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 TFCP2Q12800 502 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
LIMK2-202ENST00000333611 USP31Q70CQ4 1352 aa13.67□□□□□ -0.22
LIMK2-202ENST00000333611 RHOXF2BP0C7M4 288 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 HAND2P61296 217 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 TICAM2Q86XR7 235 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 XAGE3Q8WTP9 111 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 RHOXF2Q9BQY4 288 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 TPM1P09493 284 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 ZC3H6P61129 1189 aaKnown RBP13.66□□□□□ -0.22
LIMK2-202ENST00000333611 EPHA10Q5JZY3 1008 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 DBNDD2Q9BQY9 259 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
LIMK2-202ENST00000333611 ITSN1Q15811 1721 aa13.65□□□□□ -0.22
LIMK2-202ENST00000333611 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
LIMK2-202ENST00000333611 SATB1Q01826 763 aa13.65□□□□□ -0.22
LIMK2-202ENST00000333611 CEP57Q86XR8 500 aa13.65□□□□□ -0.22
LIMK2-202ENST00000333611 RNF217Q8TC41 542 aa13.65□□□□□ -0.22
LIMK2-202ENST00000333611 PHF8Q9UPP1 1060 aa13.65□□□□□ -0.22
LIMK2-202ENST00000333611 EPB41L2O43491 1005 aaKnown RBP13.65□□□□□ -0.22
LIMK2-202ENST00000333611 N4BP1O75113 896 aaKnown RBP13.65□□□□□ -0.22
LIMK2-202ENST00000333611 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
LIMK2-202ENST00000333611 ERLIN2O94905 339 aa13.65□□□□□ -0.22
LIMK2-202ENST00000333611 H2AFXP16104 143 aaPredicted RBP13.65□□□□□ -0.22
LIMK2-202ENST00000333611 SARNPP82979 210 aaKnown RBP13.65□□□□□ -0.22
LIMK2-202ENST00000333611 LINS1Q8NG48 757 aa13.65□□□□□ -0.22
LIMK2-202ENST00000333611 USP28Q96RU2 1077 aa13.65□□□□□ -0.22
LIMK2-202ENST00000333611 TAF5LO75529 589 aa13.65□□□□□ -0.23
LIMK2-202ENST00000333611 SSBP05455 408 aaKnown RBP eCLIP13.65□□□□□ -0.23
LIMK2-202ENST00000333611 KARSQ15046 597 aaKnown RBP13.65□□□□□ -0.23
LIMK2-202ENST00000333611 MMS22LQ6ZRQ5 1243 aa13.65□□□□□ -0.23
LIMK2-202ENST00000333611 PPP1R13BQ96KQ4 1090 aa13.65□□□□□ -0.23
LIMK2-202ENST00000333611 NLRP2Q9NX02 1062 aa13.65□□□□□ -0.23
LIMK2-202ENST00000333611 CSB-PGBD3P0DP91 1061 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 KIRREL3Q8IZU9 778 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 UTP14AQ9BVJ6 771 aaKnown RBP13.64□□□□□ -0.23
LIMK2-202ENST00000333611 CARD10Q9BWT7 1032 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 SNRKQ9NRH2 765 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 A0A0G2JLW4 131 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 PTPDC1A2A3K4 754 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 RNMTO43148 476 aaKnown RBP13.64□□□□□ -0.23
LIMK2-202ENST00000333611 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 CYP21A2P08686 494 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 PEX19P40855 299 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 PPP2R3AQ06190 1150 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 SCRN1Q12765 414 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 IFNKQ9P0W0 207 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 RIMBP3CA6NJZ7 1639 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 RIMBP3BA6NNM3 1639 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 RIMBP3Q9UFD9 1639 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 RICTORQ6R327 1708 aa13.64□□□□□ -0.23
LIMK2-202ENST00000333611 H3BQF6 201 aa13.63□□□□□ -0.23
LIMK2-202ENST00000333611 SUGCTQ9HAC7 445 aa13.63□□□□□ -0.23
LIMK2-202ENST00000333611 DBNLQ9UJU6 430 aaKnown RBP13.63□□□□□ -0.23
LIMK2-202ENST00000333611 STK38Q15208 465 aa13.63□□□□□ -0.23
LIMK2-202ENST00000333611 STX1AQ16623 288 aa13.63□□□□□ -0.23
LIMK2-202ENST00000333611 CEP57L1Q8IYX8 460 aa13.63□□□□□ -0.23
LIMK2-202ENST00000333611 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
LIMK2-202ENST00000333611 HINFPQ9BQA5 517 aa13.63□□□□□ -0.23
LIMK2-202ENST00000333611 GPHNQ9NQX3 736 aaPredicted RBP13.63□□□□□ -0.23
LIMK2-202ENST00000333611 GJB4Q9NTQ9 266 aa13.63□□□□□ -0.23
LIMK2-202ENST00000333611 C3P01024 1663 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 TIMM10P62072 90 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
LIMK2-202ENST00000333611 WASHC4Q2M389 1173 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 CC2D1AQ6P1N0 951 aaPredicted RBP13.62□□□□□ -0.23
LIMK2-202ENST00000333611 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 DONSONQ9NYP3 566 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 NEMFO60524 1076 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 EIF3JO75822 258 aaKnown RBP13.62□□□□□ -0.23
LIMK2-202ENST00000333611 LMOD1P29536 600 aaPredicted RBP13.62□□□□□ -0.23
LIMK2-202ENST00000333611 CNNM3Q8NE01 707 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 TDRD7Q8NHU6 1098 aaKnown RBP13.62□□□□□ -0.23
LIMK2-202ENST00000333611 A0A087WZG4 1122 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 TBC1D8O95759 1140 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 RESTQ13127 1097 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 KRT32Q14532 448 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 LONRF2Q1L5Z9 754 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 IP6K1Q92551 441 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 PARD6BQ9BYG5 372 aa13.62□□□□□ -0.23
LIMK2-202ENST00000333611 ELP1O95163 1332 aa13.61□□□□□ -0.23
LIMK2-202ENST00000333611 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
LIMK2-202ENST00000333611 PLA2G4DQ86XP0 818 aa13.61□□□□□ -0.23
LIMK2-202ENST00000333611 IGKV5-2P06315 115 aa13.61□□□□□ -0.23
LIMK2-202ENST00000333611 NF2P35240 595 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms