RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 SKILP12757 684 aa20.29■□□□□ 0.84
PTP4A3-201ENST00000329397 DPCR1Q3MIW9 517 aa20.29■□□□□ 0.84
PTP4A3-201ENST00000329397 GORABQ5T7V8 394 aa20.29■□□□□ 0.84
PTP4A3-201ENST00000329397 NKX2-3Q8TAU0 364 aa20.29■□□□□ 0.84
PTP4A3-201ENST00000329397 AGXT2Q9BYV1 514 aa20.29■□□□□ 0.84
PTP4A3-201ENST00000329397 RXRAP19793 462 aa20.29■□□□□ 0.84
PTP4A3-201ENST00000329397 ZNF396Q96N95 335 aaPredicted RBP20.29■□□□□ 0.84
PTP4A3-201ENST00000329397 ZSCAN20P17040 1043 aaPredicted RBP20.28■□□□□ 0.84
PTP4A3-201ENST00000329397 KLF18A0A0U1RQI7 1052 aa20.28■□□□□ 0.84
PTP4A3-201ENST00000329397 SF3A1Q15459 793 aaKnown RBP20.28■□□□□ 0.84
PTP4A3-201ENST00000329397 SYNE4Q8N205 404 aa20.28■□□□□ 0.84
PTP4A3-201ENST00000329397 PLCD3Q8N3E9 789 aa20.28■□□□□ 0.84
PTP4A3-201ENST00000329397 AIFM3Q96NN9 605 aa20.28■□□□□ 0.84
PTP4A3-201ENST00000329397 GOLGA8BA8MQT2 603 aa20.27■□□□□ 0.84
PTP4A3-201ENST00000329397 PUS7LQ9H0K6 701 aaKnown RBP20.27■□□□□ 0.84
PTP4A3-201ENST00000329397 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
PTP4A3-201ENST00000329397 SMTNL1A8MU46 457 aa20.27■□□□□ 0.83
PTP4A3-201ENST00000329397 STK38Q15208 465 aa20.27■□□□□ 0.83
PTP4A3-201ENST00000329397 CEP135Q66GS9 1140 aa20.27■□□□□ 0.83
PTP4A3-201ENST00000329397 FMR1NBQ8N0W7 255 aaPredicted RBP20.27■□□□□ 0.83
PTP4A3-201ENST00000329397 CCDC112Q8NEF3 446 aa20.27■□□□□ 0.83
PTP4A3-201ENST00000329397 MRPS27Q92552 414 aaKnown RBP20.27■□□□□ 0.83
PTP4A3-201ENST00000329397 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.83
PTP4A3-201ENST00000329397 KIF28PB7ZC32 967 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 FGAP02671 866 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 TTC39AQ5SRH9 613 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 SECISBP2LQ93073 1101 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 ANO10Q9NW15 660 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 PRC1O43663 620 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 ZAP70P43403 619 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 SARM1Q6SZW1 724 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 CEP57L1Q8IYX8 460 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 FAM89AQ96GI7 184 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 C8orf76Q96K31 380 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 GLI3P10071 1580 aa20.26■□□□□ 0.83
PTP4A3-201ENST00000329397 CTAGE5O15320 804 aa20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 CCZ1BP86790 482 aa20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 CCZ1P86791 482 aaPredicted RBP20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 ZNF274Q96GC6 653 aaPredicted RBP20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 XAGE2Q96GT9 111 aa20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 MRFAP1L1Q96HT8 127 aa20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 CEP126Q9P2H0 1117 aa20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 ORC3Q9UBD5 711 aaPredicted RBP20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 ALS2Q96Q42 1657 aa20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 ATF3P18847 181 aa20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 PTPN21Q16825 1174 aa20.25■□□□□ 0.83
PTP4A3-201ENST00000329397 MARCKSP29966 332 aaPredicted RBP20.24■□□□□ 0.83
PTP4A3-201ENST00000329397 CDC25BP30305 580 aa20.24■□□□□ 0.83
PTP4A3-201ENST00000329397 LINC00301Q8NCQ3 95 aa20.24■□□□□ 0.83
PTP4A3-201ENST00000329397 HPS5Q9UPZ3 1129 aa20.24■□□□□ 0.83
PTP4A3-201ENST00000329397 NWD2Q9ULI1 1742 aa20.24■□□□□ 0.83
PTP4A3-201ENST00000329397 KIF1AQ12756 1690 aa20.24■□□□□ 0.83
PTP4A3-201ENST00000329397 NPHP1O15259 732 aa20.24■□□□□ 0.83
PTP4A3-201ENST00000329397 ANTXR2P58335 489 aa20.24■□□□□ 0.83
PTP4A3-201ENST00000329397 NBPF11Q86T75 865 aa20.24■□□□□ 0.83
PTP4A3-201ENST00000329397 SMC2O95347 1197 aa20.23■□□□□ 0.83
PTP4A3-201ENST00000329397 TJP1Q07157 1748 aa20.23■□□□□ 0.83
PTP4A3-201ENST00000329397 CCDC57Q2TAC2 916 aa20.23■□□□□ 0.83
PTP4A3-201ENST00000329397 CAVIN2O95810 425 aa20.23■□□□□ 0.83
PTP4A3-201ENST00000329397 KAT6BQ8WYB5 2073 aa20.23■□□□□ 0.83
PTP4A3-201ENST00000329397 LMTK3Q96Q04 1460 aa20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 COL18A1P39060 1754 aa20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 CPLX1O14810 134 aa20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 PTPN14Q15678 1187 aa20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 IMMTQ16891 758 aaKnown RBP20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 ZNF215Q9UL58 517 aaPredicted RBP20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 NEDD4P46934 1319 aa20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 ADALQ6DHV7 355 aa20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 XPO4Q9C0E2 1151 aaKnown RBP20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 RTEL1Q9NZ71 1219 aa20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 IFNKQ9P0W0 207 aa20.22■□□□□ 0.83
PTP4A3-201ENST00000329397 UBE2Q2LH0YL09 131 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 CCDC158Q5M9N0 1113 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 TOM1L2Q6ZVM7 507 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 SENP2Q9HC62 589 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 GPR108Q9NPR9 543 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 MROH7-TTC4A0A0A0MT08 1334 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 SPTLC2O15270 562 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 MYSM1Q5VVJ2 828 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 CCDC191Q8NCU4 936 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 KIAA1468Q9P260 1216 aa20.21■□□□□ 0.83
PTP4A3-201ENST00000329397 GPAA1O43292 621 aa20.2■□□□□ 0.82
PTP4A3-201ENST00000329397 ZRSR1Q15695 479 aaKnown RBP20.2■□□□□ 0.82
PTP4A3-201ENST00000329397 TMC6Q7Z403 805 aa20.2■□□□□ 0.82
PTP4A3-201ENST00000329397 MB21D2Q8IYB1 491 aaPredicted RBP20.2■□□□□ 0.82
PTP4A3-201ENST00000329397 FBXO18Q8NFZ0 1043 aa20.2■□□□□ 0.82
PTP4A3-201ENST00000329397 INCENPQ9NQS7 918 aa20.2■□□□□ 0.82
PTP4A3-201ENST00000329397 ZNF142P52746 1687 aaPredicted RBP20.2■□□□□ 0.82
PTP4A3-201ENST00000329397 LMOD1P29536 600 aaPredicted RBP20.2■□□□□ 0.82
PTP4A3-201ENST00000329397 GPTP24298 496 aa20.19■□□□□ 0.82
PTP4A3-201ENST00000329397 RBM6P78332 1123 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-201ENST00000329397 DMTNQ08495 405 aa20.19■□□□□ 0.82
PTP4A3-201ENST00000329397 RALYLQ86SE5 291 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-201ENST00000329397 PHKBQ93100 1093 aa20.19■□□□□ 0.82
PTP4A3-201ENST00000329397 WDHD1O75717 1129 aaPredicted RBP20.19■□□□□ 0.82
PTP4A3-201ENST00000329397 ZNF202O95125 648 aa20.19■□□□□ 0.82
PTP4A3-201ENST00000329397 MYL10Q9BUA6 226 aa20.19■□□□□ 0.82
PTP4A3-201ENST00000329397 PAXBP1Q9Y5B6 917 aa20.19■□□□□ 0.82
PTP4A3-201ENST00000329397 ATP1A3P13637 1013 aa20.18■□□□□ 0.82
PTP4A3-201ENST00000329397 NYAP1Q6ZVC0 841 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms