RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 LARP6Q9BRS8 491 aaKnown RBP22.86■■□□□ 1.25
CHMP6-201ENST00000325167 COL24A1Q17RW2 1714 aa22.85■■□□□ 1.25
CHMP6-201ENST00000325167 E7EWF7 191 aa22.85■■□□□ 1.25
CHMP6-201ENST00000325167 GPAA1O43292 621 aa22.85■■□□□ 1.25
CHMP6-201ENST00000325167 PRPF40AO75400 957 aaKnown RBP22.85■■□□□ 1.25
CHMP6-201ENST00000325167 ADRA2BP18089 450 aa22.85■■□□□ 1.25
CHMP6-201ENST00000325167 UBE4AQ14139 1066 aa22.85■■□□□ 1.25
CHMP6-201ENST00000325167 TBC1D9BQ66K14 1250 aa22.85■■□□□ 1.25
CHMP6-201ENST00000325167 TPTE2Q6XPS3 522 aa22.85■■□□□ 1.25
CHMP6-201ENST00000325167 Q6ZUG5 572 aa22.85■■□□□ 1.25
CHMP6-201ENST00000325167 HELBQ8NG08 1087 aaPredicted RBP22.85■■□□□ 1.25
CHMP6-201ENST00000325167 GNL3LQ9NVN8 582 aaKnown RBP22.85■■□□□ 1.25
CHMP6-201ENST00000325167 NCLP19338 710 aaKnown RBP22.84■■□□□ 1.25
CHMP6-201ENST00000325167 NLRP3Q96P20 1036 aa22.84■■□□□ 1.25
CHMP6-201ENST00000325167 LLPHQ9BRT6 129 aaKnown RBP22.84■■□□□ 1.25
CHMP6-201ENST00000325167 AGXT2Q9BYV1 514 aa22.84■■□□□ 1.25
CHMP6-201ENST00000325167 BCL2L12Q9HB09 334 aa22.84■■□□□ 1.25
CHMP6-201ENST00000325167 IDH1O75874 414 aaKnown RBP22.84■■□□□ 1.25
CHMP6-201ENST00000325167 F13A1P00488 732 aa22.84■■□□□ 1.25
CHMP6-201ENST00000325167 EXOSC10Q01780 885 aaKnown RBP22.84■■□□□ 1.25
CHMP6-201ENST00000325167 PI16Q6UXB8 463 aa22.84■■□□□ 1.25
CHMP6-201ENST00000325167 NBPF5PQ86XG9 351 aaPredicted RBP22.84■■□□□ 1.25
CHMP6-201ENST00000325167 GTF3C6Q969F1 213 aa22.84■■□□□ 1.25
CHMP6-201ENST00000325167 PDGFDQ9GZP0 370 aaPredicted RBP22.84■■□□□ 1.25
CHMP6-201ENST00000325167 PIH1D3Q9NQM4 214 aaKnown RBP22.84■■□□□ 1.25
CHMP6-201ENST00000325167 WDR19Q8NEZ3 1342 aa22.83■■□□□ 1.25
CHMP6-201ENST00000325167 PDE6AP16499 860 aa22.83■■□□□ 1.24
CHMP6-201ENST00000325167 MRE11P49959 708 aa22.83■■□□□ 1.24
CHMP6-201ENST00000325167 ST3GAL1Q11201 340 aa22.83■■□□□ 1.24
CHMP6-201ENST00000325167 SLFNL1Q499Z3 407 aa22.83■■□□□ 1.24
CHMP6-201ENST00000325167 STOX1Q6ZVD7 989 aa22.83■■□□□ 1.24
CHMP6-201ENST00000325167 TMEM87AQ8NBN3 555 aa22.83■■□□□ 1.24
CHMP6-201ENST00000325167 PUS7LQ9H0K6 701 aaKnown RBP22.83■■□□□ 1.24
CHMP6-201ENST00000325167 KIF3AQ9Y496 699 aa22.83■■□□□ 1.24
CHMP6-201ENST00000325167 ZMYM6O95789 1325 aa22.82■■□□□ 1.24
CHMP6-201ENST00000325167 FOXD4L5Q5VV16 416 aaPredicted RBP22.82■■□□□ 1.24
CHMP6-201ENST00000325167 NECAB1Q8N987 351 aa22.82■■□□□ 1.24
CHMP6-201ENST00000325167 FOXD4L4Q8WXT5 416 aaPredicted RBP22.82■■□□□ 1.24
CHMP6-201ENST00000325167 RASGRF1Q13972 1273 aa22.81■■□□□ 1.24
CHMP6-201ENST00000325167 TRAPPC3LQ5T215 181 aa22.81■■□□□ 1.24
CHMP6-201ENST00000325167 TAF1LQ8IZX4 1826 aa22.81■■□□□ 1.24
CHMP6-201ENST00000325167 ZNF213O14771 459 aa22.81■■□□□ 1.24
CHMP6-201ENST00000325167 FGAP02671 866 aa22.81■■□□□ 1.24
CHMP6-201ENST00000325167 KCNQ4P56696 695 aa22.81■■□□□ 1.24
CHMP6-201ENST00000325167 LARP1BQ659C4 914 aaKnown RBP22.81■■□□□ 1.24
CHMP6-201ENST00000325167 BICDL1Q6ZP65 573 aa22.81■■□□□ 1.24
CHMP6-201ENST00000325167 TCEANC2Q96MN5 208 aa22.81■■□□□ 1.24
CHMP6-201ENST00000325167 MTMR6Q9Y217 621 aa22.81■■□□□ 1.24
CHMP6-201ENST00000325167 C4BP0C0L5 1744 aa22.8■■□□□ 1.24
CHMP6-201ENST00000325167 ZNF532Q9HCE3 1301 aa22.8■■□□□ 1.24
CHMP6-201ENST00000325167 PFKFB2O60825 505 aa22.8■■□□□ 1.24
CHMP6-201ENST00000325167 RFC4P35249 363 aa22.8■■□□□ 1.24
CHMP6-201ENST00000325167 ALX1Q15699 326 aa22.8■■□□□ 1.24
CHMP6-201ENST00000325167 ARHGEF1Q92888 912 aaKnown RBP22.8■■□□□ 1.24
CHMP6-201ENST00000325167 SYAP1Q96A49 352 aaPredicted RBP22.8■■□□□ 1.24
CHMP6-201ENST00000325167 ZNF274Q96GC6 653 aaPredicted RBP22.8■■□□□ 1.24
CHMP6-201ENST00000325167 ANKRD2Q9GZV1 360 aa22.8■■□□□ 1.24
CHMP6-201ENST00000325167 STK32BQ9NY57 414 aa22.8■■□□□ 1.24
CHMP6-201ENST00000325167 CASZ1Q86V15 1759 aa22.8■■□□□ 1.24
CHMP6-201ENST00000325167 TCRBV5S4A2TA0A5A2 114 aa22.79■■□□□ 1.24
CHMP6-201ENST00000325167 GNAT2P19087 354 aa22.79■■□□□ 1.24
CHMP6-201ENST00000325167 CAVIN4Q5BKX8 364 aa22.79■■□□□ 1.24
CHMP6-201ENST00000325167 SLC27A3Q5K4L6 730 aa22.79■■□□□ 1.24
CHMP6-201ENST00000325167 NCOA7Q8NI08 942 aa22.79■■□□□ 1.24
CHMP6-201ENST00000325167 BRF1Q92994 677 aa22.79■■□□□ 1.24
CHMP6-201ENST00000325167 AIDAQ96BJ3 306 aa22.79■■□□□ 1.24
CHMP6-201ENST00000325167 ZNF804BA4D1E1 1349 aa22.79■■□□□ 1.24
CHMP6-201ENST00000325167 SEMA3EO15041 775 aa22.78■■□□□ 1.24
CHMP6-201ENST00000325167 ZBTB22O15209 634 aa22.78■■□□□ 1.24
CHMP6-201ENST00000325167 ZNF445P59923 1031 aa22.78■■□□□ 1.24
CHMP6-201ENST00000325167 HMGN5P82970 282 aaKnown RBP22.78■■□□□ 1.24
CHMP6-201ENST00000325167 RALYLQ86SE5 291 aaKnown RBP22.78■■□□□ 1.24
CHMP6-201ENST00000325167 SRP68Q9UHB9 627 aaKnown RBP22.78■■□□□ 1.24
CHMP6-201ENST00000325167 DOCK2Q92608 1830 aa22.78■■□□□ 1.24
CHMP6-201ENST00000325167 FOXP2O15409 715 aa22.77■■□□□ 1.24
CHMP6-201ENST00000325167 MCM5P33992 734 aa22.77■■□□□ 1.24
CHMP6-201ENST00000325167 TRDNQ13061 729 aa22.77■■□□□ 1.24
CHMP6-201ENST00000325167 SLC15A2Q16348 729 aa22.77■■□□□ 1.24
CHMP6-201ENST00000325167 SPON1Q9HCB6 807 aa22.77■■□□□ 1.24
CHMP6-201ENST00000325167 CARMIL3Q8ND23 1372 aa22.77■■□□□ 1.24
CHMP6-201ENST00000325167 EVCP57679 992 aa22.77■■□□□ 1.24
CHMP6-201ENST00000325167 RPS8P62241 208 aaKnown RBP22.77■■□□□ 1.24
CHMP6-201ENST00000325167 TMED8Q6PL24 325 aaPredicted RBP22.77■■□□□ 1.24
CHMP6-201ENST00000325167 LRRC4BQ9NT99 713 aa22.77■■□□□ 1.24
CHMP6-201ENST00000325167 MINPP1Q9UNW1 487 aa22.77■■□□□ 1.24
CHMP6-201ENST00000325167 BCAMP50895 628 aa22.76■■□□□ 1.23
CHMP6-201ENST00000325167 WWC3Q9ULE0 1092 aa22.76■■□□□ 1.23
CHMP6-201ENST00000325167 LAMA4Q16363 1823 aa22.76■■□□□ 1.23
CHMP6-201ENST00000325167 ZBTB7AO95365 584 aa22.75■■□□□ 1.23
CHMP6-201ENST00000325167 COL9A3Q14050 684 aaPredicted RBP22.75■■□□□ 1.23
CHMP6-201ENST00000325167 TTLL5Q6EMB2 1281 aa22.75■■□□□ 1.23
CHMP6-201ENST00000325167 CAVIN1Q6NZI2 390 aaKnown RBP22.75■■□□□ 1.23
CHMP6-201ENST00000325167 KLHL34Q8N239 644 aa22.75■■□□□ 1.23
CHMP6-201ENST00000325167 MAGEB6Q8N7X4 407 aa22.75■■□□□ 1.23
CHMP6-201ENST00000325167 STRBPQ96SI9 672 aaKnown RBP22.75■■□□□ 1.23
CHMP6-201ENST00000325167 DENND2AQ9ULE3 1009 aa22.75■■□□□ 1.23
CHMP6-201ENST00000325167 PDS5AQ29RF7 1337 aaKnown RBP22.75■■□□□ 1.23
CHMP6-201ENST00000325167 VPS37CA5D8V6 355 aaPredicted RBP22.74■■□□□ 1.23
CHMP6-201ENST00000325167 PATL2C9JE40 543 aaKnown RBP22.74■■□□□ 1.23
CHMP6-201ENST00000325167 IGSF3O75054 1194 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms