RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 F8W031 263 aaPredicted RBP15.62■□□□□ 0.09
TPM3-204ENST00000323144 LDHAL6AQ6ZMR3 332 aa15.62■□□□□ 0.09
TPM3-204ENST00000323144 SSH1Q8WYL5 1049 aa15.62■□□□□ 0.09
TPM3-204ENST00000323144 FZD1Q9UP38 647 aa15.62■□□□□ 0.09
TPM3-204ENST00000323144 E9PSI1 815 aa15.61■□□□□ 0.09
TPM3-204ENST00000323144 UBE2Q2LH0YL09 131 aa15.61■□□□□ 0.09
TPM3-204ENST00000323144 IL1R1P14778 569 aa15.61■□□□□ 0.09
TPM3-204ENST00000323144 APOBEC3FQ8IUX4 373 aaKnown RBP15.61■□□□□ 0.09
TPM3-204ENST00000323144 CCDC102AQ96A19 550 aa15.61■□□□□ 0.09
TPM3-204ENST00000323144 CDCA7LQ96GN5 454 aa15.61■□□□□ 0.09
TPM3-204ENST00000323144 MCOLN1Q9GZU1 580 aa15.61■□□□□ 0.09
TPM3-204ENST00000323144 GYG1P46976 350 aa15.6■□□□□ 0.09
TPM3-204ENST00000323144 FKBP1BP68106 108 aa15.6■□□□□ 0.09
TPM3-204ENST00000323144 PRKG1Q13976 671 aa15.6■□□□□ 0.09
TPM3-204ENST00000323144 RABL6Q3YEC7 729 aaPredicted RBP15.6■□□□□ 0.09
TPM3-204ENST00000323144 SAGE1Q9NXZ1 904 aa15.6■□□□□ 0.09
TPM3-204ENST00000323144 HDAC9Q9UKV0 1011 aa15.6■□□□□ 0.09
TPM3-204ENST00000323144 PTPRCP08575 1304 aa15.6■□□□□ 0.09
TPM3-204ENST00000323144 CLRN2A0PK11 232 aa15.59■□□□□ 0.09
TPM3-204ENST00000323144 SLFN5Q08AF3 891 aa15.59■□□□□ 0.09
TPM3-204ENST00000323144 MKRN3Q13064 507 aaKnown RBP15.59■□□□□ 0.09
TPM3-204ENST00000323144 TTLL12Q14166 644 aaPredicted RBP15.59■□□□□ 0.09
TPM3-204ENST00000323144 LRRC24Q50LG9 513 aa15.59■□□□□ 0.09
TPM3-204ENST00000323144 KLHDC4Q8TBB5 520 aa15.59■□□□□ 0.09
TPM3-204ENST00000323144 RNF186Q9NXI6 227 aa15.59■□□□□ 0.09
TPM3-204ENST00000323144 TRPA1O75762 1119 aa15.58■□□□□ 0.08
TPM3-204ENST00000323144 DGKZQ13574 1117 aa15.58■□□□□ 0.08
TPM3-204ENST00000323144 CFAP100Q494V2 611 aa15.58■□□□□ 0.08
TPM3-204ENST00000323144 CSRNP1Q96S65 589 aa15.58■□□□□ 0.08
TPM3-204ENST00000323144 SPDYE2BA6NHP3 402 aa15.57■□□□□ 0.08
TPM3-204ENST00000323144 SPDYE6P0CI01 402 aa15.57■□□□□ 0.08
TPM3-204ENST00000323144 DLGAP5Q15398 846 aa15.57■□□□□ 0.08
TPM3-204ENST00000323144 VGLL2Q8N8G2 317 aa15.57■□□□□ 0.08
TPM3-204ENST00000323144 SMC4Q9NTJ3 1288 aa15.57■□□□□ 0.08
TPM3-204ENST00000323144 IQSEC3Q9UPP2 1182 aaPredicted RBP15.57■□□□□ 0.08
TPM3-204ENST00000323144 FAM205AQ6ZU69 1335 aa15.57■□□□□ 0.08
TPM3-204ENST00000323144 DOCK2Q92608 1830 aa15.57■□□□□ 0.08
TPM3-204ENST00000323144 CCDC85CA6NKD9 419 aa15.56■□□□□ 0.08
TPM3-204ENST00000323144 NF2P35240 595 aa15.56■□□□□ 0.08
TPM3-204ENST00000323144 GRIK5Q16478 980 aa15.56■□□□□ 0.08
TPM3-204ENST00000323144 MFSD14BQ5SR56 506 aa15.56■□□□□ 0.08
TPM3-204ENST00000323144 MTMR14Q8NCE2 650 aa15.56■□□□□ 0.08
TPM3-204ENST00000323144 VEZTQ9HBM0 779 aa15.56■□□□□ 0.08
TPM3-204ENST00000323144 RIPOR2Q9Y4F9 1068 aa15.56■□□□□ 0.08
TPM3-204ENST00000323144 MROH5Q6ZUA9 1318 aa15.55■□□□□ 0.08
TPM3-204ENST00000323144 FKBP1AP62942 108 aaKnown RBP15.55■□□□□ 0.08
TPM3-204ENST00000323144 PTPN12Q05209 780 aaKnown RBP15.55■□□□□ 0.08
TPM3-204ENST00000323144 UBE4AQ14139 1066 aa15.55■□□□□ 0.08
TPM3-204ENST00000323144 CDAN1Q8IWY9 1227 aa15.55■□□□□ 0.08
TPM3-204ENST00000323144 TDRD7Q8NHU6 1098 aaKnown RBP15.55■□□□□ 0.08
TPM3-204ENST00000323144 FAM84BQ96KN1 310 aaPredicted RBP15.55■□□□□ 0.08
TPM3-204ENST00000323144 DEFB129Q9H1M3 183 aa15.55■□□□□ 0.08
TPM3-204ENST00000323144 ANGEL1Q9UNK9 670 aaKnown RBP15.55■□□□□ 0.08
TPM3-204ENST00000323144 ZSWIM8A7E2V4 1837 aa15.54■□□□□ 0.08
TPM3-204ENST00000323144 MMP14P50281 582 aa15.54■□□□□ 0.08
TPM3-204ENST00000323144 METTL24Q5JXM2 366 aa15.54■□□□□ 0.08
TPM3-204ENST00000323144 CLMNQ96JQ2 1002 aa15.54■□□□□ 0.08
TPM3-204ENST00000323144 PRMT6Q96LA8 375 aaPredicted RBP15.54■□□□□ 0.08
TPM3-204ENST00000323144 USP44Q9H0E7 712 aa15.54■□□□□ 0.08
TPM3-204ENST00000323144 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.54■□□□□ 0.08
TPM3-204ENST00000323144 TNRC18O15417 2968 aaPredicted RBP15.54■□□□□ 0.08
TPM3-204ENST00000323144 HIBADHP31937 336 aaKnown RBP15.53■□□□□ 0.08
TPM3-204ENST00000323144 CHAF1AQ13111 956 aaPredicted RBP15.53■□□□□ 0.08
TPM3-204ENST00000323144 ALDH1L2Q3SY69 923 aa15.53■□□□□ 0.08
TPM3-204ENST00000323144 TTF2Q9UNY4 1162 aaKnown RBP15.53■□□□□ 0.08
TPM3-204ENST00000323144 RFX5P48382 616 aaPredicted RBP15.52■□□□□ 0.08
TPM3-204ENST00000323144 RBM5P52756 815 aaKnown RBP eCLIP15.52■□□□□ 0.08
TPM3-204ENST00000323144 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
TPM3-204ENST00000323144 LDLRAD1Q5T700 205 aa15.52■□□□□ 0.08
TPM3-204ENST00000323144 ARMC9Q7Z3E5 817 aa15.52■□□□□ 0.08
TPM3-204ENST00000323144 TRMT2AQ8IZ69 625 aaKnown RBP15.52■□□□□ 0.08
TPM3-204ENST00000323144 PPP2R3BQ9Y5P8 575 aa15.52■□□□□ 0.08
TPM3-204ENST00000323144 MAST2Q6P0Q8 1798 aa15.52■□□□□ 0.07
TPM3-204ENST00000323144 HTTP42858 3142 aa15.51■□□□□ 0.07
TPM3-204ENST00000323144 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
TPM3-204ENST00000323144 NBPF12Q5TAG4 269 aaPredicted RBP15.51■□□□□ 0.07
TPM3-204ENST00000323144 MYO1BO43795 1136 aa15.5■□□□□ 0.07
TPM3-204ENST00000323144 PDE8BO95263 885 aa15.5■□□□□ 0.07
TPM3-204ENST00000323144 CRKP46108 304 aa15.5■□□□□ 0.07
TPM3-204ENST00000323144 SPRYD7Q5W111 196 aa15.5■□□□□ 0.07
TPM3-204ENST00000323144 FBXO33Q7Z6M2 555 aa15.5■□□□□ 0.07
TPM3-204ENST00000323144 WNK4Q96J92 1243 aa15.5■□□□□ 0.07
TPM3-204ENST00000323144 TDRD3Q9H7E2 651 aaKnown RBP15.5■□□□□ 0.07
TPM3-204ENST00000323144 ZNF70Q9UC06 446 aaPredicted RBP15.5■□□□□ 0.07
TPM3-204ENST00000323144 MYH2Q9UKX2 1941 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 FGFR2P21802 821 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 GJA5P36382 358 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 BCAMP50895 628 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 CACNB3P54284 484 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 RASA3Q14644 834 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 PUM3Q15397 648 aaKnown RBP15.49■□□□□ 0.07
TPM3-204ENST00000323144 MAP3K11Q16584 847 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 SIL1Q9H173 461 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 R3HDMLQ9H3Y0 253 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 SERPINA10Q9UK55 444 aa15.49■□□□□ 0.07
TPM3-204ENST00000323144 RBBP6Q7Z6E9 1792 aaKnown RBP15.49■□□□□ 0.07
TPM3-204ENST00000323144 TCP10L2B9ZVM9 353 aa15.48■□□□□ 0.07
TPM3-204ENST00000323144 SREBF2Q12772 1141 aa15.48■□□□□ 0.07
TPM3-204ENST00000323144 ATG9AQ7Z3C6 839 aa15.48■□□□□ 0.07
TPM3-204ENST00000323144 VPS37DQ86XT2 251 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 463.1 ms