RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 SCRN1Q12765 414 aa14.27□□□□□ -0.13
SEC24A-201ENST00000322887 ERCC6LQ2NKX8 1250 aa14.27□□□□□ -0.13
SEC24A-201ENST00000322887 SLC4A9Q96Q91 983 aa14.27□□□□□ -0.13
SEC24A-201ENST00000322887 TJP1Q07157 1748 aa14.26□□□□□ -0.13
SEC24A-201ENST00000322887 PTCD1O75127 700 aaKnown RBP14.26□□□□□ -0.13
SEC24A-201ENST00000322887 TPM3P06753 285 aa14.26□□□□□ -0.13
SEC24A-201ENST00000322887 DHX40Q8IX18 779 aaKnown RBP14.26□□□□□ -0.13
SEC24A-201ENST00000322887 USP28Q96RU2 1077 aa14.26□□□□□ -0.13
SEC24A-201ENST00000322887 TM6SF1Q9BZW5 370 aa14.26□□□□□ -0.13
SEC24A-201ENST00000322887 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
SEC24A-201ENST00000322887 C5P01031 1676 aa14.26□□□□□ -0.13
SEC24A-201ENST00000322887 STARD3NLO95772 234 aa14.26□□□□□ -0.13
SEC24A-201ENST00000322887 PTPN14Q15678 1187 aa14.26□□□□□ -0.13
SEC24A-201ENST00000322887 STOX1Q6ZVD7 989 aa14.26□□□□□ -0.13
SEC24A-201ENST00000322887 KCNB2Q92953 911 aa14.26□□□□□ -0.13
SEC24A-201ENST00000322887 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
SEC24A-201ENST00000322887 ELP1O95163 1332 aa14.25□□□□□ -0.13
SEC24A-201ENST00000322887 MYL6BP14649 208 aa14.25□□□□□ -0.13
SEC24A-201ENST00000322887 APOBRQ0VD83 1088 aa14.25□□□□□ -0.13
SEC24A-201ENST00000322887 DDX46Q7L014 1031 aaKnown RBP14.25□□□□□ -0.13
SEC24A-201ENST00000322887 DDX19AQ9NUU7 478 aaKnown RBP14.25□□□□□ -0.13
SEC24A-201ENST00000322887 GTF2E1P29083 439 aaPredicted RBP14.25□□□□□ -0.13
SEC24A-201ENST00000322887 A0A1B0GVL5 298 aa14.24□□□□□ -0.13
SEC24A-201ENST00000322887 BECN2A8MW95 431 aa14.24□□□□□ -0.13
SEC24A-201ENST00000322887 TAF5LO75529 589 aa14.24□□□□□ -0.13
SEC24A-201ENST00000322887 ADD1P35611 737 aaKnown RBP14.24□□□□□ -0.13
SEC24A-201ENST00000322887 FGD1P98174 961 aa14.24□□□□□ -0.13
SEC24A-201ENST00000322887 RBM43Q6ZSC3 357 aaKnown RBP14.24□□□□□ -0.13
SEC24A-201ENST00000322887 FEZ1Q99689 392 aa14.24□□□□□ -0.13
SEC24A-201ENST00000322887 RREB1Q92766 1687 aa14.24□□□□□ -0.13
SEC24A-201ENST00000322887 CYP21A2P08686 494 aa14.24□□□□□ -0.13
SEC24A-201ENST00000322887 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
SEC24A-201ENST00000322887 SYT10Q6XYQ8 523 aa14.24□□□□□ -0.13
SEC24A-201ENST00000322887 DBF4Q9UBU7 674 aaPredicted RBP14.24□□□□□ -0.13
SEC24A-201ENST00000322887 USP42Q9H9J4 1324 aaKnown RBP14.24□□□□□ -0.13
SEC24A-201ENST00000322887 COL5A3P25940 1745 aaPredicted RBP14.23□□□□□ -0.13
SEC24A-201ENST00000322887 CTDNEP1O95476 244 aa14.23□□□□□ -0.13
SEC24A-201ENST00000322887 APBA3O96018 575 aa14.23□□□□□ -0.13
SEC24A-201ENST00000322887 CYP19A1P11511 503 aaPredicted RBP14.23□□□□□ -0.13
SEC24A-201ENST00000322887 G3BP1Q13283 466 aaKnown RBP eCLIP14.23□□□□□ -0.13
SEC24A-201ENST00000322887 SNW1Q13573 536 aaKnown RBP14.23□□□□□ -0.13
SEC24A-201ENST00000322887 TERF2Q15554 542 aa14.23□□□□□ -0.13
SEC24A-201ENST00000322887 HSP90AA4PQ58FG1 418 aa14.23□□□□□ -0.13
SEC24A-201ENST00000322887 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
SEC24A-201ENST00000322887 NBPF11Q86T75 865 aa14.23□□□□□ -0.13
SEC24A-201ENST00000322887 NYAP1Q6ZVC0 841 aa14.23□□□□□ -0.13
SEC24A-201ENST00000322887 TMEM51Q9NW97 253 aa14.23□□□□□ -0.13
SEC24A-201ENST00000322887 CCNL1Q9UK58 526 aaPredicted RBP14.23□□□□□ -0.13
SEC24A-201ENST00000322887 CNTNAP4Q9C0A0 1308 aa14.23□□□□□ -0.13
SEC24A-201ENST00000322887 KAT6BQ8WYB5 2073 aa14.23□□□□□ -0.13
SEC24A-201ENST00000322887 DPCR1Q3MIW9 517 aa14.22□□□□□ -0.13
SEC24A-201ENST00000322887 DNAJC10Q8IXB1 793 aa14.22□□□□□ -0.13
SEC24A-201ENST00000322887 CCAR2Q8N163 923 aaKnown RBP14.22□□□□□ -0.13
SEC24A-201ENST00000322887 DDX21Q9NR30 783 aaKnown RBP eCLIP14.22□□□□□ -0.13
SEC24A-201ENST00000322887 MORC2Q9Y6X9 1032 aaPredicted RBP14.22□□□□□ -0.13
SEC24A-201ENST00000322887 EPB41L2O43491 1005 aaKnown RBP14.22□□□□□ -0.13
SEC24A-201ENST00000322887 PDCP20941 246 aa14.22□□□□□ -0.13
SEC24A-201ENST00000322887 PSMA5P28066 241 aa14.22□□□□□ -0.13
SEC24A-201ENST00000322887 ME1P48163 572 aa14.22□□□□□ -0.13
SEC24A-201ENST00000322887 SF3B2Q13435 895 aaKnown RBP14.22□□□□□ -0.13
SEC24A-201ENST00000322887 ITPK1Q13572 414 aa14.22□□□□□ -0.13
SEC24A-201ENST00000322887 FAM177A1Q8N128 213 aaPredicted RBP14.22□□□□□ -0.13
SEC24A-201ENST00000322887 GPATCH3Q96I76 525 aa14.22□□□□□ -0.13
SEC24A-201ENST00000322887 PAXBP1Q9Y5B6 917 aa14.22□□□□□ -0.13
SEC24A-201ENST00000322887 E4F1Q66K89 784 aaPredicted RBP14.21□□□□□ -0.13
SEC24A-201ENST00000322887 FSIP1Q8NA03 581 aa14.21□□□□□ -0.13
SEC24A-201ENST00000322887 NEK1Q96PY6 1258 aa14.21□□□□□ -0.13
SEC24A-201ENST00000322887 CACNA1FO60840 1977 aa14.21□□□□□ -0.13
SEC24A-201ENST00000322887 FANCGO15287 622 aa14.21□□□□□ -0.13
SEC24A-201ENST00000322887 SMC2O95347 1197 aa14.21□□□□□ -0.13
SEC24A-201ENST00000322887 POLR3DP05423 398 aaPredicted RBP14.21□□□□□ -0.13
SEC24A-201ENST00000322887 PDIA6Q15084 440 aa14.21□□□□□ -0.13
SEC24A-201ENST00000322887 TXNRD1Q16881 649 aa14.21□□□□□ -0.13
SEC24A-201ENST00000322887 HSP90AB4PQ58FF6 505 aa14.21□□□□□ -0.13
SEC24A-201ENST00000322887 DBNLQ9UJU6 430 aaKnown RBP14.21□□□□□ -0.13
SEC24A-201ENST00000322887 SEC31AO94979 1220 aaKnown RBP14.21□□□□□ -0.14
SEC24A-201ENST00000322887 BAG6P46379 1132 aa14.21□□□□□ -0.14
SEC24A-201ENST00000322887 ARMCX5Q6P1M9 558 aa14.21□□□□□ -0.14
SEC24A-201ENST00000322887 TMC6Q7Z403 805 aa14.21□□□□□ -0.14
SEC24A-201ENST00000322887 CAMKK2Q96RR4 588 aa14.21□□□□□ -0.14
SEC24A-201ENST00000322887 IGKV5-2P06315 115 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 TFCP2Q12800 502 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 HSP90AB3PQ58FF7 597 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 LRP10Q7Z4F1 713 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 PROM2Q8N271 834 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 IFNKQ9P0W0 207 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 MED23Q9ULK4 1368 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 PXDNLA1KZ92 1463 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 GRM8O00222 908 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 TTLL5Q6EMB2 1281 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 KRT222Q8N1A0 295 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 ZNF397Q8NF99 534 aaPredicted RBP14.2□□□□□ -0.14
SEC24A-201ENST00000322887 ZFP91Q96JP5 570 aaPredicted RBP14.2□□□□□ -0.14
SEC24A-201ENST00000322887 DBNDD2Q9BQY9 259 aa14.2□□□□□ -0.14
SEC24A-201ENST00000322887 XPO4Q9C0E2 1151 aaKnown RBP14.2□□□□□ -0.14
SEC24A-201ENST00000322887 ZNF609O15014 1411 aa14.19□□□□□ -0.14
SEC24A-201ENST00000322887 POLR3GO15318 223 aaPredicted RBP14.19□□□□□ -0.14
SEC24A-201ENST00000322887 ATP1A3P13637 1013 aa14.19□□□□□ -0.14
SEC24A-201ENST00000322887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms