RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PDCP20941 246 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 DNM1Q05193 864 aaKnown RBP8.97□□□□□ -0.97
IFT88-201ENST00000319980 BICDL1Q6ZP65 573 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 GTF3C6Q969F1 213 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 ZNF512BQ96KM6 892 aaPredicted RBP8.97□□□□□ -0.97
IFT88-201ENST00000319980 SBF2Q86WG5 1849 aa8.97□□□□□ -0.97
IFT88-201ENST00000319980 JAK2O60674 1132 aa8.96□□□□□ -0.97
IFT88-201ENST00000319980 FGFR2P21802 821 aa8.96□□□□□ -0.97
IFT88-201ENST00000319980 IGHMBP2P38935 993 aaKnown RBP8.96□□□□□ -0.97
IFT88-201ENST00000319980 TTF1Q15361 905 aaPredicted RBP8.96□□□□□ -0.97
IFT88-201ENST00000319980 CDC37L1Q7L3B6 337 aa8.96□□□□□ -0.97
IFT88-201ENST00000319980 PIH1D3Q9NQM4 214 aaKnown RBP8.96□□□□□ -0.97
IFT88-201ENST00000319980 CTNNA3Q9UI47 895 aa8.96□□□□□ -0.97
IFT88-201ENST00000319980 NAP1L2Q9ULW6 460 aaPredicted RBP8.96□□□□□ -0.97
IFT88-201ENST00000319980 SLC5A1P13866 664 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 EXOSC10Q01780 885 aaKnown RBP8.96□□□□□ -0.98
IFT88-201ENST00000319980 APOBRQ0VD83 1088 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 IMMTQ16891 758 aaKnown RBP8.96□□□□□ -0.98
IFT88-201ENST00000319980 ABCC12Q96J65 1359 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 UQCRFS1P1P0C7P4 283 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 GTF2E1P29083 439 aaPredicted RBP8.96□□□□□ -0.98
IFT88-201ENST00000319980 ADD2P35612 726 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 NASPP49321 788 aaPredicted RBP8.96□□□□□ -0.98
IFT88-201ENST00000319980 SCRN1Q12765 414 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 ZSCAN25Q6NSZ9 544 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 FAM173BQ6P4H8 233 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 CLEC4GQ6UXB4 293 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 DDX11Q96FC9 970 aa8.96□□□□□ -0.98
IFT88-201ENST00000319980 APPP05067 770 aa8.95□□□□□ -0.98
IFT88-201ENST00000319980 ARID4AP29374 1257 aaPredicted RBP8.95□□□□□ -0.98
IFT88-201ENST00000319980 CCT2P78371 535 aaKnown RBP8.95□□□□□ -0.98
IFT88-201ENST00000319980 SPATA5Q8NB90 893 aa8.95□□□□□ -0.98
IFT88-201ENST00000319980 NUP98P52948 1817 aa8.95□□□□□ -0.98
IFT88-201ENST00000319980 ZNF532Q9HCE3 1301 aa8.95□□□□□ -0.98
IFT88-201ENST00000319980 PPFIA3O75145 1194 aa8.95□□□□□ -0.98
IFT88-201ENST00000319980 MYCNP04198 464 aaPredicted RBP8.95□□□□□ -0.98
IFT88-201ENST00000319980 PDIA4P13667 645 aaKnown RBP8.95□□□□□ -0.98
IFT88-201ENST00000319980 RASGRF1Q13972 1273 aa8.95□□□□□ -0.98
IFT88-201ENST00000319980 ERFEQ4G0M1 354 aa8.95□□□□□ -0.98
IFT88-201ENST00000319980 TMEM87AQ8NBN3 555 aa8.95□□□□□ -0.98
IFT88-201ENST00000319980 WWC3Q9ULE0 1092 aa8.95□□□□□ -0.98
IFT88-201ENST00000319980 ZNF213O14771 459 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 BCAMP50895 628 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 SYAP1Q96A49 352 aaPredicted RBP8.94□□□□□ -0.98
IFT88-201ENST00000319980 PDE6AP16499 860 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 UBE2HP62256 183 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 CHRNDQ07001 517 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 UBE3CQ15386 1083 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 LRSAM1Q6UWE0 723 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 FAM184AQ8NB25 1140 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 AGXT2Q9BYV1 514 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 RBSNQ9H1K0 784 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
IFT88-201ENST00000319980 PFKFB2O60825 505 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 C3orf67Q6ZVT6 689 aa8.94□□□□□ -0.98
IFT88-201ENST00000319980 CDC5LQ99459 802 aaKnown RBP8.94□□□□□ -0.98
IFT88-201ENST00000319980 GPHNQ9NQX3 736 aaPredicted RBP8.94□□□□□ -0.98
IFT88-201ENST00000319980 MYH14Q7Z406 1995 aaKnown RBP8.94□□□□□ -0.98
IFT88-201ENST00000319980 H3BQV1 296 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 IFFO2Q5TF58 517 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 TBC1D9BQ66K14 1250 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 RALYLQ86SE5 291 aaKnown RBP8.93□□□□□ -0.98
IFT88-201ENST00000319980 ANP32BQ92688 251 aaKnown RBP8.93□□□□□ -0.98
IFT88-201ENST00000319980 AIDAQ96BJ3 306 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 IQSEC3Q9UPP2 1182 aaPredicted RBP8.93□□□□□ -0.98
IFT88-201ENST00000319980 GNPATO15228 680 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 PDIA3P30101 505 aaKnown RBP8.93□□□□□ -0.98
IFT88-201ENST00000319980 KRT85P78386 507 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 MAP3K12Q12852 859 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 CSPP1Q1MSJ5 1256 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 MAGEB6Q8N7X4 407 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 NCOA7Q8NI08 942 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 TFIP11Q9UBB9 837 aaKnown RBP8.93□□□□□ -0.98
IFT88-201ENST00000319980 SRP68Q9UHB9 627 aaKnown RBP8.93□□□□□ -0.98
IFT88-201ENST00000319980 ANKRD36CQ5JPF3 1778 aa8.93□□□□□ -0.98
IFT88-201ENST00000319980 COL24A1Q17RW2 1714 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 QSER1Q2KHR3 1735 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 WTIPA6NIX2 430 aaPredicted RBP8.92□□□□□ -0.98
IFT88-201ENST00000319980 MCM5P33992 734 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 ANKRD18AQ8IVF6 992 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 NSUN7Q8NE18 718 aaKnown RBP8.92□□□□□ -0.98
IFT88-201ENST00000319980 LLPHQ9BRT6 129 aaKnown RBP8.92□□□□□ -0.98
IFT88-201ENST00000319980 BCL2L12Q9HB09 334 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 CCNL1Q9UK58 526 aaPredicted RBP8.92□□□□□ -0.98
IFT88-201ENST00000319980 SPEF2Q9C093 1822 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 CNTNAP4Q9C0A0 1308 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 TCRBV5S4A2TA0A5A2 114 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 PTPDC1A2A3K4 754 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 PRC1O43663 620 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 ZPR1O75312 459 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 CTDNEP1O95476 244 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 FOSBP53539 338 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 TRDNQ13061 729 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 CCDC24Q8N4L8 307 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 RNF214Q8ND24 703 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 SMARCC2Q8TAQ2 1214 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 ZNF274Q96GC6 653 aaPredicted RBP8.92□□□□□ -0.98
IFT88-201ENST00000319980 SETDB2Q96T68 719 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 RTL9Q8NET4 1388 aa8.92□□□□□ -0.98
IFT88-201ENST00000319980 RPS6KA4O75676 772 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms