RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 HCLS1P14317 486 aaPredicted RBP18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 PDIA3P30101 505 aaKnown RBP18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 ADD2P35612 726 aa18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 PHKA1P46020 1223 aa18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 CCT2P78371 535 aaKnown RBP18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 CCDC102BQ68D86 513 aa18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 LEO1Q8WVC0 666 aaPredicted RBP18.41■□□□□ 0.54
TSC22D3-201ENST00000315660 MYH7P12883 1935 aa18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 SPATA31A5Q5VU36 1347 aa18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 MROH5Q6ZUA9 1318 aa18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 SPATA31A7Q8IWB4 1347 aa18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 UQCRFS1P1P0C7P4 283 aa18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 ITPK1Q13572 414 aa18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 PUM3Q15397 648 aaKnown RBP18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 NAA16Q6N069 864 aaPredicted RBP18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 GIMAP6Q6P9H5 292 aa18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 FUCA2Q9BTY2 467 aa18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 PIH1D3Q9NQM4 214 aaKnown RBP18.4■□□□□ 0.54
TSC22D3-201ENST00000315660 FGFR2P21802 821 aa18.39■□□□□ 0.54
TSC22D3-201ENST00000315660 SLC9C2Q5TAH2 1124 aa18.39■□□□□ 0.54
TSC22D3-201ENST00000315660 LPIN2Q92539 896 aa18.39■□□□□ 0.54
TSC22D3-201ENST00000315660 UTP14AQ9BVJ6 771 aaKnown RBP18.39■□□□□ 0.54
TSC22D3-201ENST00000315660 NCOA5Q9HCD5 579 aaKnown RBP18.39■□□□□ 0.54
TSC22D3-201ENST00000315660 CFAP45Q9UL16 551 aa18.39■□□□□ 0.54
TSC22D3-201ENST00000315660 PHLPP1O60346 1717 aa18.39■□□□□ 0.53
TSC22D3-201ENST00000315660 SALL1Q9NSC2 1324 aa18.39■□□□□ 0.53
TSC22D3-201ENST00000315660 ZNF213O14771 459 aa18.39■□□□□ 0.53
TSC22D3-201ENST00000315660 CAMTA2O94983 1202 aa18.39■□□□□ 0.53
TSC22D3-201ENST00000315660 EVCP57679 992 aa18.39■□□□□ 0.53
TSC22D3-201ENST00000315660 HELBQ8NG08 1087 aaPredicted RBP18.39■□□□□ 0.53
TSC22D3-201ENST00000315660 ATRNO75882 1429 aa18.39■□□□□ 0.53
TSC22D3-201ENST00000315660 LTBP4Q8N2S1 1624 aa18.38■□□□□ 0.53
TSC22D3-201ENST00000315660 FAM177BA6PVY3 158 aa18.38■□□□□ 0.53
TSC22D3-201ENST00000315660 RALYLQ86SE5 291 aaKnown RBP18.38■□□□□ 0.53
TSC22D3-201ENST00000315660 MB21D2Q8IYB1 491 aaPredicted RBP18.38■□□□□ 0.53
TSC22D3-201ENST00000315660 LIG1P18858 919 aa18.38■□□□□ 0.53
TSC22D3-201ENST00000315660 UBE3CQ15386 1083 aa18.38■□□□□ 0.53
TSC22D3-201ENST00000315660 PARP10Q53GL7 1025 aa18.38■□□□□ 0.53
TSC22D3-201ENST00000315660 RREB1Q92766 1687 aa18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 NUTM2BA6NNL0 878 aaPredicted RBP18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 NUTM2EB1AL46 878 aaPredicted RBP18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 CCDC192P0DO97 292 aa18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 NUTM2AQ8IVF1 878 aaPredicted RBP18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 NCOA7Q8NI08 942 aa18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 MPHOSPH8Q99549 860 aa18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 NUP62CLQ9H1M0 184 aa18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 GPHNQ9NQX3 736 aaPredicted RBP18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 PRC1O43663 620 aa18.37■□□□□ 0.53
TSC22D3-201ENST00000315660 DHX16O60231 1041 aaKnown RBP18.36■□□□□ 0.53
TSC22D3-201ENST00000315660 SLC5A1P13866 664 aa18.36■□□□□ 0.53
TSC22D3-201ENST00000315660 MAP3K11Q16584 847 aa18.36■□□□□ 0.53
TSC22D3-201ENST00000315660 BARGINQ6ZT62 677 aa18.36■□□□□ 0.53
TSC22D3-201ENST00000315660 SEC31BQ9NQW1 1179 aa18.36■□□□□ 0.53
TSC22D3-201ENST00000315660 DDX19AQ9NUU7 478 aaKnown RBP18.36■□□□□ 0.53
TSC22D3-201ENST00000315660 ZNF532Q9HCE3 1301 aa18.36■□□□□ 0.53
TSC22D3-201ENST00000315660 UQCRHLA0A096LP55 91 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 PTMAP06454 111 aaKnown RBP18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 UQCRHP07919 91 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 PDE6AP16499 860 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 FOSBP53539 338 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 TRDNQ13061 729 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 WWC3Q9ULE0 1092 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 CICQ96RK0 1608 aaPredicted RBP18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 ARAP2Q8WZ64 1704 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 ANTXR2P58335 489 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 CCDC152Q4G0S7 254 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 BICD2Q8TD16 824 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 PGBD1Q96JS3 809 aa18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 NIP7Q9Y221 180 aaKnown RBP eCLIP18.35■□□□□ 0.53
TSC22D3-201ENST00000315660 TCRBV5S4A2TA0A5A2 114 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 NTSR2O95665 410 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 ATL3Q6DD88 541 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 MAP7D2Q96T17 732 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 DACT1Q9NYF0 836 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 WDR19Q8NEZ3 1342 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 ADD1P35611 737 aaKnown RBP18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 SPATA5Q8NB90 893 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 ZMYND15Q9H091 742 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 NBPF3Q9H094 633 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 TNMDQ9H2S6 317 aa18.34■□□□□ 0.53
TSC22D3-201ENST00000315660 CARMIL3Q8ND23 1372 aa18.33■□□□□ 0.53
TSC22D3-201ENST00000315660 RTL9Q8NET4 1388 aa18.33■□□□□ 0.53
TSC22D3-201ENST00000315660 SNAP23O00161 211 aa18.33■□□□□ 0.53
TSC22D3-201ENST00000315660 APPP05067 770 aa18.33■□□□□ 0.53
TSC22D3-201ENST00000315660 RBM10P98175 930 aaKnown RBP18.33■□□□□ 0.53
TSC22D3-201ENST00000315660 SMARCC1Q92922 1105 aaPredicted RBP18.33■□□□□ 0.53
TSC22D3-201ENST00000315660 USP25Q9UHP3 1055 aa18.33■□□□□ 0.53
TSC22D3-201ENST00000315660 MYO5AQ9Y4I1 1855 aaKnown RBP18.33■□□□□ 0.52
TSC22D3-201ENST00000315660 DDX60Q8IY21 1712 aaKnown RBP18.33■□□□□ 0.52
TSC22D3-201ENST00000315660 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.52
TSC22D3-201ENST00000315660 PPFIA3O75145 1194 aa18.33■□□□□ 0.52
TSC22D3-201ENST00000315660 FDPSP14324 419 aaKnown RBP18.33■□□□□ 0.52
TSC22D3-201ENST00000315660 IGHMBP2P38935 993 aaKnown RBP18.33■□□□□ 0.52
TSC22D3-201ENST00000315660 RASGRF1Q13972 1273 aa18.33■□□□□ 0.52
TSC22D3-201ENST00000315660 ZNF396Q96N95 335 aaPredicted RBP18.33■□□□□ 0.52
TSC22D3-201ENST00000315660 KCNQ2O43526 872 aa18.32■□□□□ 0.52
TSC22D3-201ENST00000315660 KIAA2012Q0VF49 1180 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms