RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 LDHCP07864 332 aa19.68■□□□□ 0.74
GABRB3-202ENST00000311550 UBE2Q2Q8WVN8 375 aa19.68■□□□□ 0.74
GABRB3-202ENST00000311550 KARSQ15046 597 aaKnown RBP19.68■□□□□ 0.74
GABRB3-202ENST00000311550 SLC52A2Q9HAB3 445 aa19.68■□□□□ 0.74
GABRB3-202ENST00000311550 ZNF219Q9P2Y4 722 aaPredicted RBP19.68■□□□□ 0.74
GABRB3-202ENST00000311550 TSPY3P0CV98 308 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 TSPY8P0CW00 308 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 LTKP29376 864 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 KBTBD3Q8NAB2 608 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 UTP14AQ9BVJ6 771 aaKnown RBP19.67■□□□□ 0.74
GABRB3-202ENST00000311550 TCERG1LQ5VWI1 586 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 NGLY1Q96IV0 654 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 YEATS2Q9ULM3 1422 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 SIRT2Q8IXJ6 389 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 EXOC1Q9NV70 894 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 XAGE2Q96GT9 111 aa19.67■□□□□ 0.74
GABRB3-202ENST00000311550 LMAN1P49257 510 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 RMND1Q9NWS8 449 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 BMP15O95972 392 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 CCDC191Q8NCU4 936 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 EAF2Q96CJ1 260 aaPredicted RBP19.66■□□□□ 0.74
GABRB3-202ENST00000311550 IBTKQ9P2D0 1353 aaPredicted RBP19.66■□□□□ 0.74
GABRB3-202ENST00000311550 MYOM2P54296 1465 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 A0A0D9SFI3 127 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 SPTY2D1Q68D10 685 aaPredicted RBP19.66■□□□□ 0.74
GABRB3-202ENST00000311550 NEFHP12036 1026 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 MCM3P25205 808 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 CTAGE1Q96RT6 745 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 TMOD2Q9NZR1 351 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 TRMT1LQ7Z2T5 733 aaKnown RBP19.66■□□□□ 0.74
GABRB3-202ENST00000311550 JAG2Q9Y219 1238 aa19.66■□□□□ 0.74
GABRB3-202ENST00000311550 POTEB2H3BUK9 544 aa19.65■□□□□ 0.74
GABRB3-202ENST00000311550 MYO1BO43795 1136 aa19.65■□□□□ 0.74
GABRB3-202ENST00000311550 LZTFL1Q9NQ48 299 aa19.65■□□□□ 0.74
GABRB3-202ENST00000311550 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.65■□□□□ 0.74
GABRB3-202ENST00000311550 AKR1B10O60218 316 aa19.65■□□□□ 0.74
GABRB3-202ENST00000311550 ITGA6P23229 1130 aa19.65■□□□□ 0.74
GABRB3-202ENST00000311550 SSR1P43307 286 aaKnown RBP19.65■□□□□ 0.74
GABRB3-202ENST00000311550 FAM114A1Q8IWE2 563 aa19.64■□□□□ 0.74
GABRB3-202ENST00000311550 ALS2CR12Q96Q35 445 aa19.64■□□□□ 0.74
GABRB3-202ENST00000311550 GPAA1O43292 621 aa19.64■□□□□ 0.74
GABRB3-202ENST00000311550 SLF2Q8IX21 1173 aa19.64■□□□□ 0.74
GABRB3-202ENST00000311550 KRI1Q8N9T8 703 aaKnown RBP19.64■□□□□ 0.74
GABRB3-202ENST00000311550 DRC1Q96MC2 740 aa19.64■□□□□ 0.74
GABRB3-202ENST00000311550 CABP5Q9NP86 173 aa19.64■□□□□ 0.74
GABRB3-202ENST00000311550 FBXO3Q9UK99 471 aa19.64■□□□□ 0.74
GABRB3-202ENST00000311550 METP08581 1390 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 PCDH11XQ9BZA7 1347 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 PCDH11YQ9BZA8 1340 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 ZNF75DP51815 510 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 MCM6Q14566 821 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 VPS36Q86VN1 386 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 SMARCC1Q92922 1105 aaPredicted RBP19.64■□□□□ 0.73
GABRB3-202ENST00000311550 LLPHQ9BRT6 129 aaKnown RBP19.64■□□□□ 0.73
GABRB3-202ENST00000311550 CCDC94Q9BW85 323 aaPredicted RBP19.64■□□□□ 0.73
GABRB3-202ENST00000311550 TMEM2Q9UHN6 1383 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 BEND3Q5T5X7 828 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 ANO1Q5XXA6 986 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 ATL3Q6DD88 541 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 ZFP91Q96JP5 570 aaPredicted RBP19.64■□□□□ 0.73
GABRB3-202ENST00000311550 ARFGAP3Q9NP61 516 aa19.64■□□□□ 0.73
GABRB3-202ENST00000311550 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
GABRB3-202ENST00000311550 RIOK3O14730 519 aaKnown RBP19.63■□□□□ 0.73
GABRB3-202ENST00000311550 CCDC175P0C221 793 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 MCM7P33993 719 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 MYL5Q02045 173 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 SEC62Q99442 399 aaKnown RBP19.63■□□□□ 0.73
GABRB3-202ENST00000311550 CALCOCO1Q9P1Z2 691 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 FAM135BQ49AJ0 1406 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 NEURL1BA8MQ27 555 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 SPECC1Q5M775 1068 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 DDX17Q92841 729 aaKnown RBP19.63■□□□□ 0.73
GABRB3-202ENST00000311550 MYL10Q9BUA6 226 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 KRT2P35908 639 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 TM6SF1Q9BZW5 370 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 ELP1O95163 1332 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 GNAT2P19087 354 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 TPCN1Q9ULQ1 816 aa19.63■□□□□ 0.73
GABRB3-202ENST00000311550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.63■□□□□ 0.73
GABRB3-202ENST00000311550 SHTN1A0MZ66 631 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 SPAG1Q07617 926 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 HLTFQ14527 1009 aaKnown RBP eCLIP19.62■□□□□ 0.73
GABRB3-202ENST00000311550 CTR9Q6PD62 1173 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 RASEFQ8IZ41 740 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 APPBP2Q92624 585 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 PLIN2Q99541 437 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 ARMT1Q9H993 441 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 TMCO5BA8MYB1 307 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 KIF20AO95235 890 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 ASIC1P78348 528 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 NLRP3Q96P20 1036 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 CTAGE15A4D2H0 777 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 CTAGE8P0CG41 777 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 CTAGE6Q86UF2 777 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 CTAGE4Q8IX94 777 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 PREX2Q70Z35 1606 aa19.62■□□□□ 0.73
GABRB3-202ENST00000311550 MCM9Q9NXL9 1143 aa19.61■□□□□ 0.73
GABRB3-202ENST00000311550 RFC4P35249 363 aa19.61■□□□□ 0.73
GABRB3-202ENST00000311550 NOP2P46087 812 aaKnown RBP19.61■□□□□ 0.73
GABRB3-202ENST00000311550 CCDC113Q9H0I3 377 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms