RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SUGT1Q9Y2Z0 365 aa21.92■■□□□ 1.1
SSSCA1-201ENST00000309328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.92■■□□□ 1.1
SSSCA1-201ENST00000309328 IGHDP01880 384 aa21.91■■□□□ 1.1
SSSCA1-201ENST00000309328 GTF2IP78347 998 aa21.91■■□□□ 1.1
SSSCA1-201ENST00000309328 DACT2Q5SW24 774 aa21.91■■□□□ 1.1
SSSCA1-201ENST00000309328 ANKRD45Q5TZF3 282 aa21.91■■□□□ 1.1
SSSCA1-201ENST00000309328 DBNDD2Q9BQY9 259 aa21.91■■□□□ 1.1
SSSCA1-201ENST00000309328 GJA3Q9Y6H8 435 aa21.91■■□□□ 1.1
SSSCA1-201ENST00000309328 LMOD1P29536 600 aaPredicted RBP21.9■■□□□ 1.1
SSSCA1-201ENST00000309328 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.9■■□□□ 1.1
SSSCA1-201ENST00000309328 CCDC8Q9H0W5 538 aaPredicted RBP21.9■■□□□ 1.1
SSSCA1-201ENST00000309328 CCDC88AQ3V6T2 1871 aa21.9■■□□□ 1.1
SSSCA1-201ENST00000309328 DDNO94850 711 aaPredicted RBP21.89■■□□□ 1.09
SSSCA1-201ENST00000309328 FBXW7Q969H0 707 aa21.89■■□□□ 1.09
SSSCA1-201ENST00000309328 SALL1Q9NSC2 1324 aa21.88■■□□□ 1.09
SSSCA1-201ENST00000309328 NUCB1Q02818 461 aa21.88■■□□□ 1.09
SSSCA1-201ENST00000309328 CENPQQ7L2Z9 268 aaPredicted RBP21.88■■□□□ 1.09
SSSCA1-201ENST00000309328 OGFOD1Q8N543 542 aa21.88■■□□□ 1.09
SSSCA1-201ENST00000309328 CCDC136Q96JN2 1154 aa21.88■■□□□ 1.09
SSSCA1-201ENST00000309328 RASGRF1Q13972 1273 aa21.87■■□□□ 1.09
SSSCA1-201ENST00000309328 MFSD14BQ5SR56 506 aa21.87■■□□□ 1.09
SSSCA1-201ENST00000309328 SPATA5Q8NB90 893 aa21.87■■□□□ 1.09
SSSCA1-201ENST00000309328 GPBP1L1Q9HC44 474 aaPredicted RBP21.87■■□□□ 1.09
SSSCA1-201ENST00000309328 KCNQ5Q9NR82 932 aa21.87■■□□□ 1.09
SSSCA1-201ENST00000309328 HDAC9Q9UKV0 1011 aa21.87■■□□□ 1.09
SSSCA1-201ENST00000309328 MAST3O60307 1309 aa21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 TTC41PQ6P2S7 1318 aa21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 H7C1D1 291 aa21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 SMARCA5O60264 1052 aaPredicted RBP21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 VEGFAP15692 232 aaPredicted RBP21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 GMPSP49915 693 aaPredicted RBP21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 SPTY2D1Q68D10 685 aaPredicted RBP21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 TMED8Q6PL24 325 aaPredicted RBP21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 CHD1LQ86WJ1 897 aa21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 GMLQ99445 158 aa21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 ECHDC1Q9NTX5 307 aa21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 TLR7Q9NYK1 1049 aaKnown RBP21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 GPRC5DQ9NZD1 345 aa21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 HACL1Q9UJ83 578 aa21.86■■□□□ 1.09
SSSCA1-201ENST00000309328 ERC2O15083 957 aa21.85■■□□□ 1.09
SSSCA1-201ENST00000309328 ATP5JP18859 108 aa21.85■■□□□ 1.09
SSSCA1-201ENST00000309328 CHAF1AQ13111 956 aaPredicted RBP21.85■■□□□ 1.09
SSSCA1-201ENST00000309328 PPP4R2Q9NY27 417 aa21.85■■□□□ 1.09
SSSCA1-201ENST00000309328 IQSEC3Q9UPP2 1182 aaPredicted RBP21.85■■□□□ 1.09
SSSCA1-201ENST00000309328 USP17L8P0C7I0 530 aa21.84■■□□□ 1.09
SSSCA1-201ENST00000309328 SCNN1DP51172 638 aa21.84■■□□□ 1.09
SSSCA1-201ENST00000309328 PNMA8AQ86V59 439 aaPredicted RBP21.84■■□□□ 1.09
SSSCA1-201ENST00000309328 HMG20BQ9P0W2 317 aa21.84■■□□□ 1.09
SSSCA1-201ENST00000309328 WDR90Q96KV7 1748 aa21.83■■□□□ 1.09
SSSCA1-201ENST00000309328 MX1P20591 662 aa21.83■■□□□ 1.09
SSSCA1-201ENST00000309328 MCAMP43121 646 aa21.83■■□□□ 1.09
SSSCA1-201ENST00000309328 TTF1Q15361 905 aaPredicted RBP21.83■■□□□ 1.09
SSSCA1-201ENST00000309328 MRIQ9BWK5 157 aa21.83■■□□□ 1.09
SSSCA1-201ENST00000309328 ADARB2Q9NS39 739 aaKnown RBP21.83■■□□□ 1.09
SSSCA1-201ENST00000309328 CNOT7Q9UIV1 285 aaKnown RBP21.83■■□□□ 1.09
SSSCA1-201ENST00000309328 ZNF280AP59817 542 aaPredicted RBP21.82■■□□□ 1.08
SSSCA1-201ENST00000309328 HDLBPQ00341 1268 aaKnown RBP21.82■■□□□ 1.08
SSSCA1-201ENST00000309328 B4GALNT3Q6L9W6 998 aa21.82■■□□□ 1.08
SSSCA1-201ENST00000309328 SLF2Q8IX21 1173 aa21.82■■□□□ 1.08
SSSCA1-201ENST00000309328 ZBTB12Q9Y330 459 aaPredicted RBP21.82■■□□□ 1.08
SSSCA1-201ENST00000309328 PSME4Q14997 1843 aa21.82■■□□□ 1.08
SSSCA1-201ENST00000309328 AOX1Q06278 1338 aa21.81■■□□□ 1.08
SSSCA1-201ENST00000309328 SCN9AQ15858 1988 aa21.81■■□□□ 1.08
SSSCA1-201ENST00000309328 GLRX3O76003 335 aaKnown RBP21.81■■□□□ 1.08
SSSCA1-201ENST00000309328 LDHBP07195 334 aaKnown RBP21.81■■□□□ 1.08
SSSCA1-201ENST00000309328 USP50Q70EL3 339 aaPredicted RBP21.81■■□□□ 1.08
SSSCA1-201ENST00000309328 MICALL2Q8IY33 904 aa21.81■■□□□ 1.08
SSSCA1-201ENST00000309328 LNPKQ9C0E8 428 aa21.81■■□□□ 1.08
SSSCA1-201ENST00000309328 BCL11AQ9H165 835 aa21.81■■□□□ 1.08
SSSCA1-201ENST00000309328 COL1A1P02452 1464 aaPredicted RBP21.8■■□□□ 1.08
SSSCA1-201ENST00000309328 CERS5Q8N5B7 392 aa21.8■■□□□ 1.08
SSSCA1-201ENST00000309328 ZNF784Q8NCA9 323 aaPredicted RBP21.8■■□□□ 1.08
SSSCA1-201ENST00000309328 STAP2Q9UGK3 403 aa21.8■■□□□ 1.08
SSSCA1-201ENST00000309328 SERPINA10Q9UK55 444 aa21.8■■□□□ 1.08
SSSCA1-201ENST00000309328 EPHX2P34913 555 aa21.79■■□□□ 1.08
SSSCA1-201ENST00000309328 ERICH6Q7L0X2 663 aa21.79■■□□□ 1.08
SSSCA1-201ENST00000309328 KIAA0825Q8IV33 1275 aa21.79■■□□□ 1.08
SSSCA1-201ENST00000309328 ZNF526Q8TF50 670 aaPredicted RBP21.79■■□□□ 1.08
SSSCA1-201ENST00000309328 HAUS7Q99871 368 aa21.79■■□□□ 1.08
SSSCA1-201ENST00000309328 TAF1DQ9H5J8 278 aaPredicted RBP21.79■■□□□ 1.08
SSSCA1-201ENST00000309328 TTF2Q9UNY4 1162 aaKnown RBP21.79■■□□□ 1.08
SSSCA1-201ENST00000309328 JAG2Q9Y219 1238 aa21.79■■□□□ 1.08
SSSCA1-201ENST00000309328 SALL3Q9BXA9 1300 aa21.79■■□□□ 1.08
SSSCA1-201ENST00000309328 SCN4AP35499 1836 aa21.78■■□□□ 1.08
SSSCA1-201ENST00000309328 GSTO1P78417 241 aa21.78■■□□□ 1.08
SSSCA1-201ENST00000309328 SCARF1Q14162 830 aa21.78■■□□□ 1.08
SSSCA1-201ENST00000309328 MTMR14Q8NCE2 650 aa21.78■■□□□ 1.08
SSSCA1-201ENST00000309328 RRAGCQ9HB90 399 aa21.78■■□□□ 1.08
SSSCA1-201ENST00000309328 ABCF2Q9UG63 623 aa21.78■■□□□ 1.08
SSSCA1-201ENST00000309328 PDE1AP54750 535 aa21.77■■□□□ 1.08
SSSCA1-201ENST00000309328 DZIP1Q86YF9 867 aaKnown RBP21.77■■□□□ 1.08
SSSCA1-201ENST00000309328 C16orf71Q8IYS4 520 aaPredicted RBP21.77■■□□□ 1.08
SSSCA1-201ENST00000309328 ZC3H15Q8WU90 426 aaKnown RBP21.77■■□□□ 1.08
SSSCA1-201ENST00000309328 MXD3Q9BW11 206 aa21.77■■□□□ 1.08
SSSCA1-201ENST00000309328 OSBPL3Q9H4L5 887 aa21.77■■□□□ 1.08
SSSCA1-201ENST00000309328 MYOZ2Q9NPC6 264 aa21.77■■□□□ 1.08
SSSCA1-201ENST00000309328 NMRK2Q9NPI5 230 aa21.77■■□□□ 1.08
SSSCA1-201ENST00000309328 LRP2BPQ9P2M1 347 aa21.77■■□□□ 1.08
SSSCA1-201ENST00000309328 POTECB2RU33 542 aa21.76■■□□□ 1.07
SSSCA1-201ENST00000309328 CYP2E1P05181 493 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms