RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 LINC00301Q8NCQ3 95 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 NEK11Q8NG66 645 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 COL15A1P39059 1388 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 TSPOAP1O95153 1857 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
PTPN7-201ENST00000309017 KCNA6P17658 529 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 SYKP43405 635 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 TNNT3P45378 269 aaPredicted RBP12.89□□□□□ -0.35
PTPN7-201ENST00000309017 LMBR1LQ6UX01 489 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 HAUS7Q99871 368 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 RTEL1Q9NZ71 1219 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 FMN2Q9NZ56 1722 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 ZSCAN12O43309 604 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 ZSWIM4Q9H7M6 989 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 PLEKHG1Q9ULL1 1385 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-201ENST00000309017 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
PTPN7-201ENST00000309017 EPC1Q9H2F5 836 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 L2HGDHQ9H9P8 463 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 COPRSQ9NQ92 184 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 H2AFXP16104 143 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-201ENST00000309017 CASQ1P31415 396 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 STK11IPQ8N1F8 1099 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 METTL22Q9BUU2 404 aaPredicted RBP12.88□□□□□ -0.35
PTPN7-201ENST00000309017 A0A1W2PQ27 194 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 A0A1W2PQ64 194 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 A0A1W2PQD8 194 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 HSPD1P10809 573 aaKnown RBP12.88□□□□□ -0.35
PTPN7-201ENST00000309017 PFKFB1P16118 471 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 MYSM1Q5VVJ2 828 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 KCNH5Q8NCM2 988 aa12.88□□□□□ -0.35
PTPN7-201ENST00000309017 TUBB4AP04350 444 aa12.87□□□□□ -0.35
PTPN7-201ENST00000309017 HNRNPH2P55795 449 aaKnown RBP12.87□□□□□ -0.35
PTPN7-201ENST00000309017 ANKRD24Q8TF21 1146 aa12.87□□□□□ -0.35
PTPN7-201ENST00000309017 FHOD1Q9Y613 1164 aa12.87□□□□□ -0.35
PTPN7-201ENST00000309017 GTF2E1P29083 439 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-201ENST00000309017 IMMTQ16891 758 aaKnown RBP12.87□□□□□ -0.35
PTPN7-201ENST00000309017 HSP90AB3PQ58FF7 597 aa12.87□□□□□ -0.35
PTPN7-201ENST00000309017 ANO1Q5XXA6 986 aa12.87□□□□□ -0.35
PTPN7-201ENST00000309017 RAPGEF4Q8WZA2 1011 aa12.87□□□□□ -0.35
PTPN7-201ENST00000309017 ZNF274Q96GC6 653 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-201ENST00000309017 SRRTQ9BXP5 876 aaKnown RBP12.87□□□□□ -0.35
PTPN7-201ENST00000309017 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
PTPN7-201ENST00000309017 TPM1P09493 284 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 MYL5Q02045 173 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 TMEM51Q9NW97 253 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 PRC1O43663 620 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 YEATS4O95619 227 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-201ENST00000309017 DSCC1Q9BVC3 393 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 LRRFIP1Q32MZ4 808 aaKnown RBP12.86□□□□□ -0.35
PTPN7-201ENST00000309017 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 JMYQ8N9B5 988 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 NLRP2Q9NX02 1062 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 ERBB3P21860 1342 aa12.86□□□□□ -0.35
PTPN7-201ENST00000309017 OAS2P29728 719 aaKnown RBP12.85□□□□□ -0.35
PTPN7-201ENST00000309017 TRDNQ13061 729 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 CREBRFQ8IUR6 639 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 NFATC2IPQ8NCF5 419 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 ARFGAP3Q9NP61 516 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
PTPN7-201ENST00000309017 APPP05067 770 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 PLA2G4AP47712 749 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 PNOCQ13519 176 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 TRIM29Q14134 588 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 CPLX2Q6PUV4 134 aaKnown RBP12.85□□□□□ -0.35
PTPN7-201ENST00000309017 BRAPQ7Z569 592 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 CNNM3Q8NE01 707 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 ZNF330Q9Y3S2 320 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-201ENST00000309017 CYP2C19P33261 490 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 DPF2Q92785 391 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 DIP2BQ9P265 1576 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 PHLPP2Q6ZVD8 1323 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 AGLP35573 1532 aa12.85□□□□□ -0.35
PTPN7-201ENST00000309017 LRRC37A3O60309 1634 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 FDPSP14324 419 aaKnown RBP12.84□□□□□ -0.35
PTPN7-201ENST00000309017 RXRAP19793 462 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 EXOSC10Q01780 885 aaKnown RBP12.84□□□□□ -0.35
PTPN7-201ENST00000309017 KARSQ15046 597 aaKnown RBP12.84□□□□□ -0.35
PTPN7-201ENST00000309017 ZFP91Q96JP5 570 aaPredicted RBP12.84□□□□□ -0.35
PTPN7-201ENST00000309017 RNF113AO15541 343 aaKnown RBP12.84□□□□□ -0.35
PTPN7-201ENST00000309017 CSB-PGBD3P0DP91 1061 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 KRBA2Q6ZNG9 492 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 TXLNBQ8N3L3 684 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 POLR3EQ9NVU0 708 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 UTYO14607 1347 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 EFCAB8A8MWE9 144 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 LMAN1P49257 510 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 PPP2R3AQ06190 1150 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 NFXL1Q6ZNB6 911 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 CCDC12Q8WUD4 166 aaPredicted RBP12.84□□□□□ -0.35
PTPN7-201ENST00000309017 FANCLQ9NW38 375 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 MAST3O60307 1309 aa12.84□□□□□ -0.35
PTPN7-201ENST00000309017 TMEM232C9JQI7 657 aa12.83□□□□□ -0.35
PTPN7-201ENST00000309017 ATP2B1P20020 1258 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms