RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 SMARCC1Q92922 1105 aaPredicted RBP12.26□□□□□ -0.45
KDM2A-201ENST00000308783 PKP1Q13835 747 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 ADCK5Q3MIX3 580 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 C17orf53Q8N3J3 647 aaPredicted RBP12.25□□□□□ -0.45
KDM2A-201ENST00000308783 RNF214Q8ND24 703 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 PPP1R9BQ96SB3 815 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 SRP68Q9UHB9 627 aaKnown RBP12.25□□□□□ -0.45
KDM2A-201ENST00000308783 CDHR2Q9BYE9 1310 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 GOLGA6L1Q8N7Z2 621 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 ST18O60284 1047 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 CIAO1O76071 339 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 XAGE2Q96GT9 111 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 HAUS7Q99871 368 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 RIPOR2Q9Y4F9 1068 aa12.25□□□□□ -0.45
KDM2A-201ENST00000308783 ANKRD36CQ5JPF3 1778 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 PDE8AO60658 829 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 CNNM1Q9NRU3 951 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 ZNF609O15014 1411 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 FKBP4Q02790 459 aaKnown RBP eCLIP12.24□□□□□ -0.45
KDM2A-201ENST00000308783 METTL24Q5JXM2 366 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 GBP4Q96PP9 640 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 ANKRD18BA2A2Z9 1011 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 TULP2O00295 520 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 UTP14AQ9BVJ6 771 aaKnown RBP12.24□□□□□ -0.45
KDM2A-201ENST00000308783 CCDC39Q9UFE4 941 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
KDM2A-201ENST00000308783 TERF2Q15554 542 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 TNPO1Q92973 898 aaKnown RBP12.23□□□□□ -0.45
KDM2A-201ENST00000308783 CCDC171Q6TFL3 1326 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 RIC1Q4ADV7 1423 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 WTIPA6NIX2 430 aaPredicted RBP12.23□□□□□ -0.45
KDM2A-201ENST00000308783 TRIM66O15016 1216 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 TAF5LO75529 589 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 RUFY2Q8WXA3 655 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 TMX3Q96JJ7 454 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 CCNL1Q9UK58 526 aaPredicted RBP12.23□□□□□ -0.45
KDM2A-201ENST00000308783 RBM8AQ9Y5S9 174 aaKnown RBP12.23□□□□□ -0.45
KDM2A-201ENST00000308783 GNPATO15228 680 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 NTSR2O95665 410 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 IFIT1P09914 478 aaKnown RBP12.23□□□□□ -0.45
KDM2A-201ENST00000308783 QTRT2Q9H974 415 aaKnown RBP12.23□□□□□ -0.45
KDM2A-201ENST00000308783 PAG1Q9NWQ8 432 aa12.23□□□□□ -0.45
KDM2A-201ENST00000308783 COL4A1P02462 1669 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 USPL1Q5W0Q7 1092 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 RPAINQ86UA6 219 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 FEZ1Q99689 392 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 BTAF1O14981 1849 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 H0YHG0 523 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 SARNPP82979 210 aaKnown RBP12.22□□□□□ -0.45
KDM2A-201ENST00000308783 GORABQ5T7V8 394 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 TBC1D9BQ66K14 1250 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 TTLL5Q6EMB2 1281 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 TCEANC2Q96MN5 208 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 SSFA2P28290 1259 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 NECTIN1Q15223 517 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 CXorf56Q9H5V9 222 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 GPR108Q9NPR9 543 aa12.22□□□□□ -0.45
KDM2A-201ENST00000308783 COL5A3P25940 1745 aaPredicted RBP12.21□□□□□ -0.45
KDM2A-201ENST00000308783 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.45
KDM2A-201ENST00000308783 CALRP27797 417 aaKnown RBP12.21□□□□□ -0.45
KDM2A-201ENST00000308783 VPS53Q5VIR6 699 aa12.21□□□□□ -0.45
KDM2A-201ENST00000308783 A0A0G2JLW4 131 aa12.21□□□□□ -0.46
KDM2A-201ENST00000308783 CTR9Q6PD62 1173 aa12.21□□□□□ -0.46
KDM2A-201ENST00000308783 VGLL2Q8N8G2 317 aa12.21□□□□□ -0.46
KDM2A-201ENST00000308783 KBTBD3Q8NAB2 608 aa12.21□□□□□ -0.46
KDM2A-201ENST00000308783 MAP4K1Q92918 833 aa12.21□□□□□ -0.46
KDM2A-201ENST00000308783 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.46
KDM2A-201ENST00000308783 MYH3P11055 1940 aa12.21□□□□□ -0.46
KDM2A-201ENST00000308783 MED23Q9ULK4 1368 aa12.21□□□□□ -0.46
KDM2A-201ENST00000308783 TTC36A6NLP5 189 aa12.21□□□□□ -0.46
KDM2A-201ENST00000308783 SETQ01105 290 aaPredicted RBP12.21□□□□□ -0.46
KDM2A-201ENST00000308783 ZAP70P43403 619 aa12.2□□□□□ -0.46
KDM2A-201ENST00000308783 TTC39AQ5SRH9 613 aa12.2□□□□□ -0.46
KDM2A-201ENST00000308783 CREB3L3Q68CJ9 461 aa12.2□□□□□ -0.46
KDM2A-201ENST00000308783 JAKMIP1Q96N16 626 aaKnown RBP12.2□□□□□ -0.46
KDM2A-201ENST00000308783 TRPC5Q9UL62 973 aaPredicted RBP12.2□□□□□ -0.46
KDM2A-201ENST00000308783 JRKLQ9Y4A0 524 aa12.2□□□□□ -0.46
KDM2A-201ENST00000308783 POLD1P28340 1107 aa12.2□□□□□ -0.46
KDM2A-201ENST00000308783 NOP2P46087 812 aaKnown RBP12.2□□□□□ -0.46
KDM2A-201ENST00000308783 TAF1P21675 1872 aa12.2□□□□□ -0.46
KDM2A-201ENST00000308783 RREB1Q92766 1687 aa12.2□□□□□ -0.46
KDM2A-201ENST00000308783 AK2P54819 239 aa12.19□□□□□ -0.46
KDM2A-201ENST00000308783 CAVIN1Q6NZI2 390 aaKnown RBP12.19□□□□□ -0.46
KDM2A-201ENST00000308783 NBPF11Q86T75 865 aa12.19□□□□□ -0.46
KDM2A-201ENST00000308783 SLC27A2O14975 620 aa12.19□□□□□ -0.46
KDM2A-201ENST00000308783 PDE8BO95263 885 aa12.19□□□□□ -0.46
KDM2A-201ENST00000308783 GUCY2CP25092 1073 aa12.19□□□□□ -0.46
KDM2A-201ENST00000308783 MCAMP43121 646 aa12.19□□□□□ -0.46
KDM2A-201ENST00000308783 SLC51AQ86UW1 340 aa12.19□□□□□ -0.46
KDM2A-201ENST00000308783 HIP1O00291 1037 aa12.19□□□□□ -0.46
KDM2A-201ENST00000308783 CCDC158Q5M9N0 1113 aa12.19□□□□□ -0.46
KDM2A-201ENST00000308783 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms