RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 VTI1BQ9UEU0 232 aa8.1□□□□□ -1.11
CSN3-201ENST00000304954 SOX13Q9UN79 622 aa8.1□□□□□ -1.11
CSN3-201ENST00000304954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
CSN3-201ENST00000304954 HOXB4P17483 251 aaPredicted RBP8.09□□□□□ -1.11
CSN3-201ENST00000304954 FCGRTP55899 365 aa8.09□□□□□ -1.11
CSN3-201ENST00000304954 TRIM28Q13263 835 aaKnown RBP8.09□□□□□ -1.11
CSN3-201ENST00000304954 PI16Q6UXB8 463 aa8.09□□□□□ -1.11
CSN3-201ENST00000304954 LINC00114Q6XXX2 140 aa8.09□□□□□ -1.11
CSN3-201ENST00000304954 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
CSN3-201ENST00000304954 GLIS3Q8NEA6 775 aa8.09□□□□□ -1.11
CSN3-201ENST00000304954 FOXD4L4Q8WXT5 416 aaPredicted RBP8.09□□□□□ -1.11
CSN3-201ENST00000304954 SETDB2Q96T68 719 aa8.09□□□□□ -1.11
CSN3-201ENST00000304954 OSBPL7Q9BZF2 842 aa8.09□□□□□ -1.11
CSN3-201ENST00000304954 CEP44Q9C0F1 390 aa8.09□□□□□ -1.11
CSN3-201ENST00000304954 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
CSN3-201ENST00000304954 GRIA4P48058 902 aa8.08□□□□□ -1.12
CSN3-201ENST00000304954 PPP2R3AQ06190 1150 aa8.08□□□□□ -1.12
CSN3-201ENST00000304954 IKBKEQ14164 716 aa8.08□□□□□ -1.12
CSN3-201ENST00000304954 CRELD1Q96HD1 420 aa8.08□□□□□ -1.12
CSN3-201ENST00000304954 TRPA1O75762 1119 aa8.07□□□□□ -1.12
CSN3-201ENST00000304954 USP17L7P0C7H9 530 aa8.07□□□□□ -1.12
CSN3-201ENST00000304954 SNRPNP63162 240 aaKnown RBP8.07□□□□□ -1.12
CSN3-201ENST00000304954 C8orf86Q6ZUL3 223 aa8.07□□□□□ -1.12
CSN3-201ENST00000304954 PLVAPQ9BX97 442 aa8.07□□□□□ -1.12
CSN3-201ENST00000304954 ZNF576Q9H609 170 aa8.07□□□□□ -1.12
CSN3-201ENST00000304954 SAMM50Q9Y512 469 aa8.07□□□□□ -1.12
CSN3-201ENST00000304954 BAG6P46379 1132 aa8.06□□□□□ -1.12
CSN3-201ENST00000304954 PCDH1Q08174 1060 aa8.06□□□□□ -1.12
CSN3-201ENST00000304954 COL9A3Q14050 684 aaPredicted RBP8.06□□□□□ -1.12
CSN3-201ENST00000304954 HP1BP3Q5SSJ5 553 aaPredicted RBP8.06□□□□□ -1.12
CSN3-201ENST00000304954 DMRTC2Q8IXT2 367 aaPredicted RBP8.06□□□□□ -1.12
CSN3-201ENST00000304954 HHIPQ96QV1 700 aa8.06□□□□□ -1.12
CSN3-201ENST00000304954 NACC1Q96RE7 527 aa8.06□□□□□ -1.12
CSN3-201ENST00000304954 SEC31BQ9NQW1 1179 aa8.06□□□□□ -1.12
CSN3-201ENST00000304954 AKAP2Q9Y2D5 859 aa8.06□□□□□ -1.12
CSN3-201ENST00000304954 SPATA31C1P0DKV0 1188 aa8.05□□□□□ -1.12
CSN3-201ENST00000304954 RLBP1P12271 317 aa8.05□□□□□ -1.12
CSN3-201ENST00000304954 EPHA1P21709 976 aa8.05□□□□□ -1.12
CSN3-201ENST00000304954 ST13P50502 369 aaKnown RBP8.05□□□□□ -1.12
CSN3-201ENST00000304954 C19orf57Q0VDD7 668 aa8.05□□□□□ -1.12
CSN3-201ENST00000304954 SPRED3Q2MJR0 410 aa8.05□□□□□ -1.12
CSN3-201ENST00000304954 VN1R5Q7Z5H4 357 aa8.05□□□□□ -1.12
CSN3-201ENST00000304954 TRIM11Q96F44 468 aa8.05□□□□□ -1.12
CSN3-201ENST00000304954 SH2B1Q9NRF2 756 aaPredicted RBP8.05□□□□□ -1.12
CSN3-201ENST00000304954 A0A0A0MRY4 1105 aa8.04□□□□□ -1.12
CSN3-201ENST00000304954 LINC01387J3KSC0 135 aa8.04□□□□□ -1.12
CSN3-201ENST00000304954 FSCN2O14926 492 aa8.04□□□□□ -1.12
CSN3-201ENST00000304954 B3GALT4O96024 378 aa8.04□□□□□ -1.12
CSN3-201ENST00000304954 ESRRAP11474 423 aaPredicted RBP8.04□□□□□ -1.12
CSN3-201ENST00000304954 ELNP15502 786 aa8.04□□□□□ -1.12
CSN3-201ENST00000304954 TAGLNQ01995 201 aaKnown RBP8.04□□□□□ -1.12
CSN3-201ENST00000304954 MRPL58Q14197 206 aaKnown RBP8.04□□□□□ -1.12
CSN3-201ENST00000304954 TAF1CQ15572 869 aaPredicted RBP8.04□□□□□ -1.12
CSN3-201ENST00000304954 ILDR2Q71H61 639 aa8.04□□□□□ -1.12
CSN3-201ENST00000304954 FBXO11Q86XK2 927 aa8.04□□□□□ -1.12
CSN3-201ENST00000304954 C3orf58Q8NDZ4 430 aa8.04□□□□□ -1.12
CSN3-201ENST00000304954 TMEM39AQ9NV64 488 aa8.04□□□□□ -1.12
CSN3-201ENST00000304954 TTF2Q9UNY4 1162 aaKnown RBP8.04□□□□□ -1.12
CSN3-201ENST00000304954 CNTNAP5Q8WYK1 1306 aa8.03□□□□□ -1.12
CSN3-201ENST00000304954 METTL12A8MUP2 240 aa8.03□□□□□ -1.12
CSN3-201ENST00000304954 AP3B2Q13367 1082 aa8.03□□□□□ -1.12
CSN3-201ENST00000304954 SUZ12Q15022 739 aaKnown RBP8.03□□□□□ -1.12
CSN3-201ENST00000304954 DIEXFQ68CQ4 756 aaKnown RBP8.03□□□□□ -1.12
CSN3-201ENST00000304954 SV2BQ7L1I2 683 aa8.03□□□□□ -1.12
CSN3-201ENST00000304954 FMR1NBQ8N0W7 255 aaPredicted RBP8.03□□□□□ -1.12
CSN3-201ENST00000304954 MRRFQ96E11 262 aaKnown RBP8.03□□□□□ -1.12
CSN3-201ENST00000304954 GPN3Q9UHW5 284 aaPredicted RBP8.03□□□□□ -1.12
CSN3-201ENST00000304954 E9PSI1 815 aa8.02□□□□□ -1.13
CSN3-201ENST00000304954 APBA3O96018 575 aa8.02□□□□□ -1.13
CSN3-201ENST00000304954 CYP11A1P05108 521 aa8.02□□□□□ -1.13
CSN3-201ENST00000304954 NOC4LQ9BVI4 516 aaKnown RBP8.02□□□□□ -1.13
CSN3-201ENST00000304954 EMILIN2Q9BXX0 1053 aa8.02□□□□□ -1.13
CSN3-201ENST00000304954 USP31Q70CQ4 1352 aa8.01□□□□□ -1.13
CSN3-201ENST00000304954 SOX1O00570 391 aaPredicted RBP8.01□□□□□ -1.13
CSN3-201ENST00000304954 CD68P34810 354 aaPredicted RBP8.01□□□□□ -1.13
CSN3-201ENST00000304954 RBM25P49756 843 aaKnown RBP8.01□□□□□ -1.13
CSN3-201ENST00000304954 SETDB1Q15047 1291 aa8.01□□□□□ -1.13
CSN3-201ENST00000304954 IGF2-ASQ6U949 168 aa8.01□□□□□ -1.13
CSN3-201ENST00000304954 SLC7A3Q8WY07 619 aa8.01□□□□□ -1.13
CSN3-201ENST00000304954 FAM161BQ96MY7 647 aa8.01□□□□□ -1.13
CSN3-201ENST00000304954 METTL5Q9NRN9 209 aaKnown RBP8.01□□□□□ -1.13
CSN3-201ENST00000304954 NRG1Q02297 640 aaPredicted RBP8□□□□□ -1.13
CSN3-201ENST00000304954 PWP1Q13610 501 aa8□□□□□ -1.13
CSN3-201ENST00000304954 SCARA3Q6AZY7 606 aa8□□□□□ -1.13
CSN3-201ENST00000304954 MRPL18Q9H0U6 180 aaKnown RBP8□□□□□ -1.13
CSN3-201ENST00000304954 C9orf172C9J069 976 aa7.99□□□□□ -1.13
CSN3-201ENST00000304954 GSTM4Q03013 218 aa7.99□□□□□ -1.13
CSN3-201ENST00000304954 ZNF423Q2M1K9 1284 aa7.99□□□□□ -1.13
CSN3-201ENST00000304954 NECAB3Q96P71 396 aaPredicted RBP7.99□□□□□ -1.13
CSN3-201ENST00000304954 SCAMP3O14828 347 aaKnown RBP7.98□□□□□ -1.13
CSN3-201ENST00000304954 CDC25BP30305 580 aa7.98□□□□□ -1.13
CSN3-201ENST00000304954 LRRC14Q15048 493 aa7.98□□□□□ -1.13
CSN3-201ENST00000304954 CCDC85BQ15834 202 aaPredicted RBP7.98□□□□□ -1.13
CSN3-201ENST00000304954 TXNDC11Q6PKC3 985 aa7.98□□□□□ -1.13
CSN3-201ENST00000304954 ADAMTSL4Q6UY14 1074 aa7.98□□□□□ -1.13
CSN3-201ENST00000304954 TMEM87AQ8NBN3 555 aa7.98□□□□□ -1.13
CSN3-201ENST00000304954 CORO1BQ9BR76 489 aa7.98□□□□□ -1.13
CSN3-201ENST00000304954 RNF19AQ9NV58 838 aa7.98□□□□□ -1.13
CSN3-201ENST00000304954 DLL1O00548 723 aa7.97□□□□□ -1.13
CSN3-201ENST00000304954 DEAF1O75398 565 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms