RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 NEUROD2Q15784 382 aa7.36□□□□□ -1.23
ZNF440-201ENST00000304060 ERO1BQ86YB8 467 aa7.36□□□□□ -1.23
ZNF440-201ENST00000304060 ATP5J2-PTCD1G3V325 749 aa7.36□□□□□ -1.23
ZNF440-201ENST00000304060 SASH1O94885 1247 aa7.36□□□□□ -1.23
ZNF440-201ENST00000304060 COLQQ9Y215 455 aaPredicted RBP7.36□□□□□ -1.23
ZNF440-201ENST00000304060 MED23Q9ULK4 1368 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 CCT4P50991 539 aaKnown RBP7.35□□□□□ -1.23
ZNF440-201ENST00000304060 IFIT5Q13325 482 aaKnown RBP7.35□□□□□ -1.23
ZNF440-201ENST00000304060 PDE3AQ14432 1141 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 CCDC57Q2TAC2 916 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 PAPPA2Q9BXP8 1791 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 VIRMAQ69YN4 1812 aaKnown RBP7.35□□□□□ -1.23
ZNF440-201ENST00000304060 H0YGN5 161 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 TRMT44Q8IYL2 757 aaKnown RBP7.35□□□□□ -1.23
ZNF440-201ENST00000304060 CELF1Q92879 486 aaKnown RBP7.35□□□□□ -1.23
ZNF440-201ENST00000304060 ZNF341Q9BYN7 854 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 ELP3Q9H9T3 547 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 LRRFIP2Q9Y608 721 aaKnown RBP7.35□□□□□ -1.23
ZNF440-201ENST00000304060 TNPO2O14787 897 aaKnown RBP7.35□□□□□ -1.23
ZNF440-201ENST00000304060 PPP2R1AP30153 589 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 PHACTR3Q96KR7 559 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 ZNF804BA4D1E1 1349 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 UBN2Q6ZU65 1347 aa7.35□□□□□ -1.23
ZNF440-201ENST00000304060 YDJCA8MPS7 323 aa7.34□□□□□ -1.23
ZNF440-201ENST00000304060 GJB1P08034 283 aa7.34□□□□□ -1.23
ZNF440-201ENST00000304060 RALBP1Q15311 655 aa7.34□□□□□ -1.23
ZNF440-201ENST00000304060 ZIC5Q96T25 663 aa7.34□□□□□ -1.23
ZNF440-201ENST00000304060 BSDC1Q9NW68 430 aaPredicted RBP7.34□□□□□ -1.23
ZNF440-201ENST00000304060 FAM205AQ6ZU69 1335 aa7.34□□□□□ -1.23
ZNF440-201ENST00000304060 EN2P19622 333 aaPredicted RBP7.34□□□□□ -1.23
ZNF440-201ENST00000304060 CFAP100Q494V2 611 aa7.34□□□□□ -1.23
ZNF440-201ENST00000304060 GPR153Q6NV75 609 aa7.34□□□□□ -1.23
ZNF440-201ENST00000304060 MYPNQ86TC9 1320 aa7.34□□□□□ -1.23
ZNF440-201ENST00000304060 POLLQ9UGP5 575 aa7.34□□□□□ -1.23
ZNF440-201ENST00000304060 F8W031 263 aaPredicted RBP7.34□□□□□ -1.24
ZNF440-201ENST00000304060 FXR1P51114 621 aaKnown RBP eCLIP7.34□□□□□ -1.24
ZNF440-201ENST00000304060 FKBP1AP62942 108 aaKnown RBP7.34□□□□□ -1.24
ZNF440-201ENST00000304060 CRHR2Q13324 411 aa7.34□□□□□ -1.24
ZNF440-201ENST00000304060 LDLRAD1Q5T700 205 aa7.34□□□□□ -1.24
ZNF440-201ENST00000304060 OTUD5Q96G74 571 aa7.34□□□□□ -1.24
ZNF440-201ENST00000304060 PSMC4P43686 418 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 UBE2OQ9C0C9 1292 aaKnown RBP7.33□□□□□ -1.24
ZNF440-201ENST00000304060 PTCH2Q9Y6C5 1203 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 ARFGEF2Q9Y6D5 1785 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 KIAA0100Q14667 2235 aaKnown RBP7.33□□□□□ -1.24
ZNF440-201ENST00000304060 WNT10BO00744 389 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 TEKT1Q969V4 418 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 OPTNQ96CV9 577 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 ZNF333Q96JL9 665 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 ISCA1Q9BUE6 129 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 OSBPP22059 807 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 CTSWP56202 376 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 ANKLE1Q8NAG6 615 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 CCDC85AQ96PX6 553 aaPredicted RBP7.33□□□□□ -1.24
ZNF440-201ENST00000304060 SRRDQ9UH36 339 aa7.33□□□□□ -1.24
ZNF440-201ENST00000304060 RASA3Q14644 834 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 ZNF697Q5TEC3 545 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 ZSCAN29Q8IWY8 852 aaPredicted RBP7.32□□□□□ -1.24
ZNF440-201ENST00000304060 NBPF3Q9H094 633 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 CHPF2Q9P2E5 772 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 THSD7BQ9C0I4 1608 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 IFIT1P09914 478 aaKnown RBP7.32□□□□□ -1.24
ZNF440-201ENST00000304060 MAP3K11Q16584 847 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 DUSP27Q5VZP5 1158 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 MTMR14Q8NCE2 650 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 RUNDC1Q96C34 613 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 CLRN2A0PK11 232 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 POTEFA5A3E0 1075 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 NBPF9Q3BBW0 867 aa7.32□□□□□ -1.24
ZNF440-201ENST00000304060 MTIF3Q9H2K0 278 aaKnown RBP7.32□□□□□ -1.24
ZNF440-201ENST00000304060 TTF2Q9UNY4 1162 aaKnown RBP7.32□□□□□ -1.24
ZNF440-201ENST00000304060 MYBBP1AQ9BQG0 1328 aaKnown RBP7.31□□□□□ -1.24
ZNF440-201ENST00000304060 IGSF3O75054 1194 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 PPIL2Q13356 520 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 ZGPATQ8N5A5 531 aaKnown RBP7.31□□□□□ -1.24
ZNF440-201ENST00000304060 SLC5A4Q9NY91 659 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 C9orf78Q9NZ63 289 aaPredicted RBP7.31□□□□□ -1.24
ZNF440-201ENST00000304060 PLIN1O60240 522 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 ADCY3O60266 1144 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 TLR2O60603 784 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 MOB2Q70IA6 237 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 ANXA1P04083 346 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 CCL5P13501 91 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 PRAMEF18Q5VWM3 479 aa7.31□□□□□ -1.24
ZNF440-201ENST00000304060 GTF3C2Q8WUA4 911 aaPredicted RBP7.31□□□□□ -1.24
ZNF440-201ENST00000304060 METTL22Q9BUU2 404 aaPredicted RBP7.31□□□□□ -1.24
ZNF440-201ENST00000304060 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
ZNF440-201ENST00000304060 DACT2Q5SW24 774 aa7.3□□□□□ -1.24
ZNF440-201ENST00000304060 AS3MTQ9HBK9 375 aa7.3□□□□□ -1.24
ZNF440-201ENST00000304060 HMX1Q9NP08 348 aaPredicted RBP7.3□□□□□ -1.24
ZNF440-201ENST00000304060 NEFLP07196 543 aa7.3□□□□□ -1.24
ZNF440-201ENST00000304060 HIBADHP31937 336 aaKnown RBP7.3□□□□□ -1.24
ZNF440-201ENST00000304060 CHAF1AQ13111 956 aaPredicted RBP7.3□□□□□ -1.24
ZNF440-201ENST00000304060 DEFB123Q8N688 67 aa7.3□□□□□ -1.24
ZNF440-201ENST00000304060 CNKSR2Q8WXI2 1034 aa7.3□□□□□ -1.24
ZNF440-201ENST00000304060 WRNIP1Q96S55 665 aa7.3□□□□□ -1.24
ZNF440-201ENST00000304060 TBC1D2Q9BYX2 928 aa7.3□□□□□ -1.24
ZNF440-201ENST00000304060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.3□□□□□ -1.24
ZNF440-201ENST00000304060 STXBP5LQ9Y2K9 1186 aa7.3□□□□□ -1.24
ZNF440-201ENST00000304060 RIPOR2Q9Y4F9 1068 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms