RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PLCB1Q9NQ66 1216 aa8.63□□□□□ -1.03
SF3B3-201ENST00000302516 TSNAXIP1Q2TAA8 658 aa8.63□□□□□ -1.03
SF3B3-201ENST00000302516 CACNA2D3Q8IZS8 1091 aa8.63□□□□□ -1.03
SF3B3-201ENST00000302516 STMN2Q93045 179 aa8.63□□□□□ -1.03
SF3B3-201ENST00000302516 FAM184BQ9ULE4 1060 aa8.63□□□□□ -1.03
SF3B3-201ENST00000302516 ASIC1P78348 528 aa8.63□□□□□ -1.03
SF3B3-201ENST00000302516 PPIP5K1Q6PFW1 1433 aa8.63□□□□□ -1.03
SF3B3-201ENST00000302516 Q6ZUG5 572 aa8.63□□□□□ -1.03
SF3B3-201ENST00000302516 TRMT112Q9UI30 125 aaKnown RBP8.63□□□□□ -1.03
SF3B3-201ENST00000302516 CFAP58Q5T655 872 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 SEL1L2Q5TEA6 688 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 CYP26C1Q6V0L0 522 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 RPGRIP1Q96KN7 1286 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 IMPG2Q9BZV3 1241 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 LUC7L2Q9Y383 392 aaKnown RBP8.62□□□□□ -1.03
SF3B3-201ENST00000302516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.62□□□□□ -1.03
SF3B3-201ENST00000302516 PLB1Q6P1J6 1458 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 HMGB1P1B2RPK0 211 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-201ENST00000302516 LMNTD2Q8IXW0 634 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 BAG1Q99933 345 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-201ENST00000302516 RBM8AQ9Y5S9 174 aaKnown RBP8.62□□□□□ -1.03
SF3B3-201ENST00000302516 MAP7D1Q3KQU3 841 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 NAPGQ99747 312 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-201ENST00000302516 NKIRAS1Q9NYS0 192 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 WDHD1O75717 1129 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-201ENST00000302516 CCDC152Q4G0S7 254 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 CEP57Q86XR8 500 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 PPFIBP2Q8ND30 876 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 TRPM2O94759 1503 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 CHMP4BP1P59074 171 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 DNM1Q05193 864 aaKnown RBP8.62□□□□□ -1.03
SF3B3-201ENST00000302516 TRERF1Q96PN7 1200 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 ZSWIM4Q9H7M6 989 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 F6X3S4 739 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 KIF3CO14782 793 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 NPC1L1Q9UHC9 1359 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 GSTA5Q7RTV2 222 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 BICD1Q96G01 975 aa8.62□□□□□ -1.03
SF3B3-201ENST00000302516 DCAF8L1A6NGE4 600 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 MTMR3Q13615 1198 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 IFT20Q8IY31 132 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 ADAMTS12P58397 1594 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 IL15P40933 162 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 MYL5Q02045 173 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 SF3B2Q13435 895 aaKnown RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 TAOK1Q7L7X3 1001 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 ARHGAP24Q8N264 748 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 SNRPA1P09661 255 aaKnown RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 PLCG2P16885 1265 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 INTS8Q75QN2 995 aaKnown RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 SELENOSQ9BQE4 189 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.61□□□□□ -1.032e-17■□□□□ 9.8
SF3B3-201ENST00000302516 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 GNA11P29992 359 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 ZNF445P59923 1031 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 ATP8B2P98198 1209 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 IQUBQ8NA54 791 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 ZNF518AQ6AHZ1 1483 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 TSPY3P0CV98 308 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 TSPY8P0CW00 308 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 CALCOCO2Q13137 446 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 BRF1Q92994 677 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 PAIP2Q9BPZ3 127 aaKnown RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 VCX3BQ9H321 246 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 PAG1Q9NWQ8 432 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 UTP11Q9Y3A2 253 aaKnown RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 UBE3BQ7Z3V4 1068 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.61□□□□□ -1.032e-6■□□□□ 9.6
SF3B3-201ENST00000302516 C14orf93Q9H972 538 aaKnown RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 ABCC2Q92887 1545 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 DENND4BO75064 1496 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 RPL13P26373 211 aaKnown RBP8.61□□□□□ -1.03
SF3B3-201ENST00000302516 KLHL34Q8N239 644 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 UBL4BQ8N7F7 174 aa8.61□□□□□ -1.03
SF3B3-201ENST00000302516 ARID4AP29374 1257 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-201ENST00000302516 PPFIA1Q13136 1202 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 C10orf67Q8IYJ2 551 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 NUP58Q9BVL2 599 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 IBSPP21815 317 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-201ENST00000302516 PTGS1P23219 599 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 C6orf50Q9HD87 102 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 RUFY4Q6ZNE9 571 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 APBB1IPQ7Z5R6 666 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-201ENST00000302516 FCHSD1Q86WN1 690 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 MRPL50Q8N5N7 158 aaKnown RBP8.6□□□□□ -1.03
SF3B3-201ENST00000302516 UTP14AQ9BVJ6 771 aaKnown RBP8.6□□□□□ -1.03
SF3B3-201ENST00000302516 VCXQ9H320 206 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 GUCA1BQ9UMX6 200 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 SYNRGQ9UMZ2 1314 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 CLASP1Q7Z460 1538 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 AK9Q5TCS8 1911 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 AFMP43652 599 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 CERS3Q8IU89 383 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 IFNKQ9P0W0 207 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 PPP1R7Q15435 360 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 ZNF569Q5MCW4 686 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 PUF60Q9UHX1 559 aaKnown RBP8.6□□□□□ -1.03
SF3B3-201ENST00000302516 CCDC160A6NGH7 325 aa8.6□□□□□ -1.03
SF3B3-201ENST00000302516 CNNM4Q6P4Q7 775 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms