RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CCT6AP40227 531 aaKnown RBP15.3■□□□□ 0.04
CASC4-201ENST00000299957 HSPA2P54652 639 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 CTDSPL2Q05D32 466 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 RHOXF2Q9BQY4 288 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 DESI2Q9BSY9 194 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 PCDHA7Q9UN72 937 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 SLC4A4Q9Y6R1 1079 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
CASC4-201ENST00000299957 AATKQ6ZMQ8 1374 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 TMEM2Q9UHN6 1383 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 AOX1Q06278 1338 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 HSPD1P10809 573 aaKnown RBP15.29■□□□□ 0.04
CASC4-201ENST00000299957 DPCR1Q3MIW9 517 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 CCDC47Q96A33 483 aaKnown RBP15.29■□□□□ 0.04
CASC4-201ENST00000299957 UIMC1Q96RL1 719 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 RUFY1Q96T51 708 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 CCDC70Q6NSX1 233 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 KIAA1328Q86T90 577 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 AMOTL1Q8IY63 956 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 ADKP55263 362 aaKnown RBP15.29■□□□□ 0.04
CASC4-201ENST00000299957 NLRP5P59047 1200 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 FANCCQ00597 558 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 WTAPQ15007 396 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 NOM1Q5C9Z4 860 aaKnown RBP15.29■□□□□ 0.04
CASC4-201ENST00000299957 TRMT1LQ7Z2T5 733 aaKnown RBP15.29■□□□□ 0.04
CASC4-201ENST00000299957 EFCAB6Q5THR3 1501 aa15.29■□□□□ 0.04
CASC4-201ENST00000299957 POLR1AO95602 1720 aaPredicted RBP15.28■□□□□ 0.04
CASC4-201ENST00000299957 KIF5CO60282 957 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 ANO1Q5XXA6 986 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 LEKR1Q6ZMV7 388 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 PGBD1Q96JS3 809 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 SLC52A2Q9HAB3 445 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 POLR2DO15514 142 aaKnown RBP15.28■□□□□ 0.04
CASC4-201ENST00000299957 IKQ13123 557 aaPredicted RBP15.28■□□□□ 0.04
CASC4-201ENST00000299957 JAKMIP3Q5VZ66 844 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 ARMT1Q9H993 441 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 DACH1Q9UI36 760 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 MBD4O95243 580 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 RABEP2Q9H5N1 569 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 RNF17Q9BXT8 1623 aaKnown RBP15.28■□□□□ 0.04
CASC4-201ENST00000299957 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
CASC4-201ENST00000299957 ATP5JP18859 108 aa15.27■□□□□ 0.04
CASC4-201ENST00000299957 TAF3Q5VWG9 929 aa15.27■□□□□ 0.04
CASC4-201ENST00000299957 KIF2AO00139 706 aaPredicted RBP15.27■□□□□ 0.04
CASC4-201ENST00000299957 CYP7A1P22680 504 aa15.27■□□□□ 0.04
CASC4-201ENST00000299957 GDAP1L1Q96MZ0 367 aa15.27■□□□□ 0.04
CASC4-201ENST00000299957 INCENPQ9NQS7 918 aa15.27■□□□□ 0.04
CASC4-201ENST00000299957 FGAP02671 866 aa15.27■□□□□ 0.03
CASC4-201ENST00000299957 IGKV5-2P06315 115 aa15.27■□□□□ 0.03
CASC4-201ENST00000299957 MTX1Q13505 466 aa15.27■□□□□ 0.03
CASC4-201ENST00000299957 BMS1Q14692 1282 aaKnown RBP15.27■□□□□ 0.03
CASC4-201ENST00000299957 RTN1Q16799 776 aa15.27■□□□□ 0.03
CASC4-201ENST00000299957 CCDC144BQ3MJ40 725 aa15.27■□□□□ 0.03
CASC4-201ENST00000299957 TTC14Q96N46 770 aa15.27■□□□□ 0.03
CASC4-201ENST00000299957 ATP10DQ9P241 1426 aa15.27■□□□□ 0.03
CASC4-201ENST00000299957 LRRC8AQ8IWT6 810 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 CCDC150Q8NCX0 1101 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 STX8Q9UNK0 236 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 AXIN2Q9Y2T1 843 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 IQSEC2Q5JU85 1478 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 A0A0G2JLW4 131 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 USP27XA6NNY8 438 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 CAVIN2O95810 425 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 POLA2Q14181 598 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 ZNHIT6Q9NWK9 470 aaKnown RBP15.26■□□□□ 0.03
CASC4-201ENST00000299957 TOB2Q14106 344 aaPredicted RBP15.26■□□□□ 0.03
CASC4-201ENST00000299957 ZNF174Q15697 407 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 DNAJC10Q8IXB1 793 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 SYNE4Q8N205 404 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 CAPZA3Q96KX2 299 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 ATP1A3P13637 1013 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 IDEP14735 1019 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 EVCP57679 992 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 COL9A3Q14050 684 aaPredicted RBP15.26■□□□□ 0.03
CASC4-201ENST00000299957 KRT40Q6A162 431 aa15.26■□□□□ 0.03
CASC4-201ENST00000299957 GNL3LQ9NVN8 582 aaKnown RBP15.26■□□□□ 0.03
CASC4-201ENST00000299957 USP6P35125 1406 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 TET3O43151 1660 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 GLI2P10070 1586 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 IRS4O14654 1257 aaPredicted RBP15.25■□□□□ 0.03
CASC4-201ENST00000299957 PDIA3P30101 505 aaKnown RBP15.25■□□□□ 0.03
CASC4-201ENST00000299957 RRAGBQ5VZM2 374 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 ZNF397Q8NF99 534 aaPredicted RBP15.25■□□□□ 0.03
CASC4-201ENST00000299957 CTCFLQ8NI51 663 aaPredicted RBP15.25■□□□□ 0.03
CASC4-201ENST00000299957 SPHKAPQ2M3C7 1700 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 ABCC3O15438 1527 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 MYSM1Q5VVJ2 828 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 SLC5A1P13866 664 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 PFKFB1P16118 471 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 ITGA6P23229 1130 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 EPS15P42566 896 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 GRAMD1CQ8IYS0 662 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 WASF1Q92558 559 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 DCAF5Q96JK2 942 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 AK7Q96M32 723 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 SRRTQ9BXP5 876 aaKnown RBP15.25■□□□□ 0.03
CASC4-201ENST00000299957 NFE2L3Q9Y4A8 694 aa15.25■□□□□ 0.03
CASC4-201ENST00000299957 CLASP1Q7Z460 1538 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms