RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 TTF1Q15361 905 aaPredicted RBP21.55■■□□□ 1.04
GABRB1-201ENST00000295454 SLC10A5Q5PT55 438 aa21.55■■□□□ 1.04
GABRB1-201ENST00000295454 NBPF5PQ86XG9 351 aaPredicted RBP21.55■■□□□ 1.04
GABRB1-201ENST00000295454 ANKRD18AQ8IVF6 992 aa21.55■■□□□ 1.04
GABRB1-201ENST00000295454 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.55■■□□□ 1.04
GABRB1-201ENST00000295454 DDX49Q9Y6V7 483 aaKnown RBP21.55■■□□□ 1.04
GABRB1-201ENST00000295454 TCRBV5S4A2TA0A5A2 114 aa21.54■■□□□ 1.04
GABRB1-201ENST00000295454 STX6O43752 255 aa21.54■■□□□ 1.04
GABRB1-201ENST00000295454 RGL2O15211 777 aa21.53■■□□□ 1.04
GABRB1-201ENST00000295454 FGAP02671 866 aa21.53■■□□□ 1.04
GABRB1-201ENST00000295454 CHST3Q7LGC8 479 aa21.53■■□□□ 1.04
GABRB1-201ENST00000295454 BRF1Q92994 677 aa21.53■■□□□ 1.04
GABRB1-201ENST00000295454 IQSEC3Q9UPP2 1182 aaPredicted RBP21.53■■□□□ 1.04
GABRB1-201ENST00000295454 ZSCAN22P10073 491 aaPredicted RBP21.53■■□□□ 1.04
GABRB1-201ENST00000295454 KLHL40Q2TBA0 621 aa21.53■■□□□ 1.04
GABRB1-201ENST00000295454 GPT2Q8TD30 523 aa21.53■■□□□ 1.04
GABRB1-201ENST00000295454 BCL11BQ9C0K0 894 aaPredicted RBP21.53■■□□□ 1.04
GABRB1-201ENST00000295454 NSFL1CQ9UNZ2 370 aaKnown RBP21.53■■□□□ 1.04
GABRB1-201ENST00000295454 COL1A1P02452 1464 aaPredicted RBP21.52■■□□□ 1.04
GABRB1-201ENST00000295454 FSD2A1L4K1 749 aa21.52■■□□□ 1.04
GABRB1-201ENST00000295454 EXOSC10Q01780 885 aaKnown RBP21.52■■□□□ 1.04
GABRB1-201ENST00000295454 SLC51AQ86UW1 340 aa21.52■■□□□ 1.04
GABRB1-201ENST00000295454 GDPD2Q9HCC8 539 aa21.52■■□□□ 1.04
GABRB1-201ENST00000295454 DHX32Q7L7V1 743 aaKnown RBP21.52■■□□□ 1.03
GABRB1-201ENST00000295454 GYG1P46976 350 aa21.51■■□□□ 1.03
GABRB1-201ENST00000295454 UBE3CQ15386 1083 aa21.51■■□□□ 1.03
GABRB1-201ENST00000295454 ZSCAN25Q6NSZ9 544 aa21.51■■□□□ 1.03
GABRB1-201ENST00000295454 NYXQ9GZU5 481 aa21.51■■□□□ 1.03
GABRB1-201ENST00000295454 MINPP1Q9UNW1 487 aa21.51■■□□□ 1.03
GABRB1-201ENST00000295454 MTMR6Q9Y217 621 aa21.51■■□□□ 1.03
GABRB1-201ENST00000295454 NBPF3Q9H094 633 aa21.5■■□□□ 1.03
GABRB1-201ENST00000295454 BSDC1Q9NW68 430 aaPredicted RBP21.5■■□□□ 1.03
GABRB1-201ENST00000295454 JAK2O60674 1132 aa21.5■■□□□ 1.03
GABRB1-201ENST00000295454 F13A1P00488 732 aa21.5■■□□□ 1.03
GABRB1-201ENST00000295454 NCLP19338 710 aaKnown RBP21.5■■□□□ 1.03
GABRB1-201ENST00000295454 APOBRQ0VD83 1088 aa21.5■■□□□ 1.03
GABRB1-201ENST00000295454 TRAPPC3LQ5T215 181 aa21.5■■□□□ 1.03
GABRB1-201ENST00000295454 MAGEB6Q8N7X4 407 aa21.5■■□□□ 1.03
GABRB1-201ENST00000295454 GTF3C6Q969F1 213 aa21.5■■□□□ 1.03
GABRB1-201ENST00000295454 GPHNQ9NQX3 736 aaPredicted RBP21.5■■□□□ 1.03
GABRB1-201ENST00000295454 KLRK1P26718 216 aa21.49■■□□□ 1.03
GABRB1-201ENST00000295454 RFC4P35249 363 aa21.49■■□□□ 1.03
GABRB1-201ENST00000295454 GAS2L3Q86XJ1 694 aa21.49■■□□□ 1.03
GABRB1-201ENST00000295454 NKX2-3Q8TAU0 364 aa21.49■■□□□ 1.03
GABRB1-201ENST00000295454 RBM27Q9P2N5 1060 aaKnown RBP21.49■■□□□ 1.03
GABRB1-201ENST00000295454 DENND2AQ9ULE3 1009 aa21.49■■□□□ 1.03
GABRB1-201ENST00000295454 NFIXQ14938 502 aa21.48■■□□□ 1.03
GABRB1-201ENST00000295454 NLRP3Q96P20 1036 aa21.48■■□□□ 1.03
GABRB1-201ENST00000295454 CTNNA3Q9UI47 895 aa21.48■■□□□ 1.03
GABRB1-201ENST00000295454 MYH13Q9UKX3 1938 aa21.48■■□□□ 1.03
GABRB1-201ENST00000295454 CHD4Q14839 1912 aa21.48■■□□□ 1.03
GABRB1-201ENST00000295454 VPS37CA5D8V6 355 aaPredicted RBP21.47■■□□□ 1.03
GABRB1-201ENST00000295454 GOLGA6L3A6NEY3 463 aa21.47■■□□□ 1.03
GABRB1-201ENST00000295454 HMGB1P09429 215 aaKnown RBP21.47■■□□□ 1.03
GABRB1-201ENST00000295454 FGD1P98174 961 aa21.47■■□□□ 1.03
GABRB1-201ENST00000295454 SCRN1Q12765 414 aa21.47■■□□□ 1.03
GABRB1-201ENST00000295454 IMMTQ16891 758 aaKnown RBP21.47■■□□□ 1.03
GABRB1-201ENST00000295454 CAVIN1Q6NZI2 390 aaKnown RBP21.47■■□□□ 1.03
GABRB1-201ENST00000295454 CNPY2Q9Y2B0 182 aa21.47■■□□□ 1.03
GABRB1-201ENST00000295454 ZNF804BA4D1E1 1349 aa21.47■■□□□ 1.03
GABRB1-201ENST00000295454 TRIM37O94972 964 aa21.47■■□□□ 1.03
GABRB1-201ENST00000295454 TPTE2Q6XPS3 522 aa21.47■■□□□ 1.03
GABRB1-201ENST00000295454 BRPF3Q9ULD4 1205 aa21.47■■□□□ 1.03
GABRB1-201ENST00000295454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.46■■□□□ 1.03
GABRB1-201ENST00000295454 TM4SF1P30408 202 aa21.46■■□□□ 1.03
GABRB1-201ENST00000295454 CDC37L1Q7L3B6 337 aa21.46■■□□□ 1.03
GABRB1-201ENST00000295454 STRBPQ96SI9 672 aaKnown RBP21.46■■□□□ 1.03
GABRB1-201ENST00000295454 AGXT2Q9BYV1 514 aa21.46■■□□□ 1.03
GABRB1-201ENST00000295454 GADD45BO75293 160 aaPredicted RBP21.46■■□□□ 1.03
GABRB1-201ENST00000295454 MBD4O95243 580 aa21.46■■□□□ 1.03
GABRB1-201ENST00000295454 RPS8P62241 208 aaKnown RBP21.46■■□□□ 1.03
GABRB1-201ENST00000295454 KRT27Q7Z3Y8 459 aa21.46■■□□□ 1.03
GABRB1-201ENST00000295454 TBC1D10CQ8IV04 446 aa21.46■■□□□ 1.03
GABRB1-201ENST00000295454 ARMT1Q9H993 441 aa21.46■■□□□ 1.03
GABRB1-201ENST00000295454 ANTXR2P58335 489 aa21.45■■□□□ 1.02
GABRB1-201ENST00000295454 MAP3K12Q12852 859 aa21.45■■□□□ 1.02
GABRB1-201ENST00000295454 LARP1BQ659C4 914 aaKnown RBP21.45■■□□□ 1.02
GABRB1-201ENST00000295454 MB21D2Q8IYB1 491 aaPredicted RBP21.45■■□□□ 1.02
GABRB1-201ENST00000295454 EPB41L4AQ9HCS5 686 aaPredicted RBP21.45■■□□□ 1.02
GABRB1-201ENST00000295454 CACNA1SQ13698 1873 aa21.45■■□□□ 1.02
GABRB1-201ENST00000295454 UBE4AQ14139 1066 aa21.44■■□□□ 1.02
GABRB1-201ENST00000295454 USP48Q86UV5 1035 aa21.44■■□□□ 1.02
GABRB1-201ENST00000295454 AIDAQ96BJ3 306 aa21.44■■□□□ 1.02
GABRB1-201ENST00000295454 PFKFB2O60825 505 aa21.44■■□□□ 1.02
GABRB1-201ENST00000295454 APPP05067 770 aa21.44■■□□□ 1.02
GABRB1-201ENST00000295454 NCOA5Q9HCD5 579 aaKnown RBP21.44■■□□□ 1.02
GABRB1-201ENST00000295454 CARMIL3Q8ND23 1372 aa21.44■■□□□ 1.02
GABRB1-201ENST00000295454 ZNF213O14771 459 aa21.43■■□□□ 1.02
GABRB1-201ENST00000295454 PRKAB2O43741 272 aa21.43■■□□□ 1.02
GABRB1-201ENST00000295454 XRCC6P12956 609 aaKnown RBP eCLIP21.43■■□□□ 1.02
GABRB1-201ENST00000295454 CCT2P78371 535 aaKnown RBP21.43■■□□□ 1.02
GABRB1-201ENST00000295454 ADGRA1Q86SQ6 560 aa21.43■■□□□ 1.02
GABRB1-201ENST00000295454 LCORLQ8N3X6 602 aa21.43■■□□□ 1.02
GABRB1-201ENST00000295454 DDX11Q96FC9 970 aa21.43■■□□□ 1.02
GABRB1-201ENST00000295454 FAM84BQ96KN1 310 aaPredicted RBP21.43■■□□□ 1.02
GABRB1-201ENST00000295454 CTDNEP1O95476 244 aa21.43■■□□□ 1.02
GABRB1-201ENST00000295454 FERMT3Q86UX7 667 aa21.43■■□□□ 1.02
GABRB1-201ENST00000295454 NPHP1O15259 732 aa21.42■■□□□ 1.02
GABRB1-201ENST00000295454 PPFIA3O75145 1194 aa21.42■■□□□ 1.02
GABRB1-201ENST00000295454 MIGA1Q8NAN2 632 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms