RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 CALR3Q96L12 384 aaKnown RBP16.73■□□□□ 0.27
SEC16A-202ENST00000290037 KRT2P35908 639 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 GABPB1Q06547 395 aaPredicted RBP16.72■□□□□ 0.27
SEC16A-202ENST00000290037 ZSCAN29Q8IWY8 852 aaPredicted RBP16.72■□□□□ 0.27
SEC16A-202ENST00000290037 FAM114A2Q9NRY5 505 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 AKR1B10O60218 316 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 SDSP20132 328 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 ZNF445P59923 1031 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 CCDC129Q6ZRS4 1044 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 RUFY3Q7L099 469 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 MCM10Q7L590 875 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 ZBTB40Q9NUA8 1239 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 CNNM4Q6P4Q7 775 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 MAIP1Q8WWC4 291 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 LDHAL6AQ6ZMR3 332 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 APOBRQ0VD83 1088 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 HS2ST1Q7LGA3 356 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
SEC16A-202ENST00000290037 CCDC26Q8TAB7 109 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 KIFAP3Q92845 792 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 HAUS3Q68CZ6 603 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 NUTM1Q86Y26 1132 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 ACEP12821 1306 aa16.72■□□□□ 0.27
SEC16A-202ENST00000290037 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
SEC16A-202ENST00000290037 SEMA3FQ13275 785 aa16.71■□□□□ 0.27
SEC16A-202ENST00000290037 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
SEC16A-202ENST00000290037 PABPN1LA6NDY0 278 aaKnown RBP16.71■□□□□ 0.27
SEC16A-202ENST00000290037 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
SEC16A-202ENST00000290037 EIF3DO15371 548 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEC16A-202ENST00000290037 UTP14AQ9BVJ6 771 aaKnown RBP16.71■□□□□ 0.27
SEC16A-202ENST00000290037 MKRN1Q9UHC7 482 aaKnown RBP16.71■□□□□ 0.27
SEC16A-202ENST00000290037 RANBP6O60518 1105 aaKnown RBP16.71■□□□□ 0.27
SEC16A-202ENST00000290037 PPFIA3O75145 1194 aa16.71■□□□□ 0.27
SEC16A-202ENST00000290037 CACNA1FO60840 1977 aa16.71■□□□□ 0.27
SEC16A-202ENST00000290037 PAG1Q9NWQ8 432 aa16.71■□□□□ 0.27
SEC16A-202ENST00000290037 ZC3H13Q5T200 1668 aaKnown RBP16.71■□□□□ 0.27
SEC16A-202ENST00000290037 EYA3Q99504 573 aa16.71■□□□□ 0.27
SEC16A-202ENST00000290037 RNF113AO15541 343 aaKnown RBP16.71■□□□□ 0.26
SEC16A-202ENST00000290037 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.26
SEC16A-202ENST00000290037 SPAG5Q96R06 1193 aa16.71■□□□□ 0.26
SEC16A-202ENST00000290037 IQCGQ9H095 443 aaKnown RBP16.71■□□□□ 0.26
SEC16A-202ENST00000290037 SYCE1Q8N0S2 351 aa16.71■□□□□ 0.26
SEC16A-202ENST00000290037 DDX54Q8TDD1 881 aaKnown RBP16.71■□□□□ 0.26
SEC16A-202ENST00000290037 IWS1Q96ST2 819 aa16.71■□□□□ 0.26
SEC16A-202ENST00000290037 MLKLQ8NB16 471 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 ERO1AQ96HE7 468 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
SEC16A-202ENST00000290037 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 SKILP12757 684 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 TRIML1Q8N9V2 468 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 RRP36Q96EU6 259 aaKnown RBP16.7■□□□□ 0.26
SEC16A-202ENST00000290037 CEP152O94986 1710 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 RUNDC3BQ96NL0 473 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 OGFRQ9NZT2 677 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 SETBP1Q9Y6X0 1596 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 MAP7Q14244 749 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 PLCB1Q9NQ66 1216 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 JADE2Q9NQC1 790 aa16.7■□□□□ 0.26
SEC16A-202ENST00000290037 MTMR3Q13615 1198 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 GRIPAP1Q4V328 841 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 FAM81BQ96LP2 452 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 GNG11P61952 73 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 BCAP29Q9UHQ4 241 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 ATP10DQ9P241 1426 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 ACTN4O43707 911 aaKnown RBP16.69■□□□□ 0.26
SEC16A-202ENST00000290037 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 SYCP3Q8IZU3 236 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 ALG1Q9BT22 464 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 EBAG9O00559 213 aa16.69■□□□□ 0.26
SEC16A-202ENST00000290037 DENND2AQ9ULE3 1009 aa16.68■□□□□ 0.26
SEC16A-202ENST00000290037 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
SEC16A-202ENST00000290037 MAP4K4O95819 1239 aaPredicted RBP16.68■□□□□ 0.26
SEC16A-202ENST00000290037 TYRO3Q06418 890 aa16.68■□□□□ 0.26
SEC16A-202ENST00000290037 DEXIO95424 95 aa16.68■□□□□ 0.26
SEC16A-202ENST00000290037 MYL1P05976 194 aa16.68■□□□□ 0.26
SEC16A-202ENST00000290037 HLTFQ14527 1009 aaKnown RBP eCLIP16.68■□□□□ 0.269e-7■■■□□ 15.3
SEC16A-202ENST00000290037 CTNNBL1Q8WYA6 563 aaPredicted RBP16.68■□□□□ 0.26
SEC16A-202ENST00000290037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.68■□□□□ 0.26
SEC16A-202ENST00000290037 TSPY3P0CV98 308 aa16.68■□□□□ 0.26
SEC16A-202ENST00000290037 TSPY8P0CW00 308 aa16.68■□□□□ 0.26
SEC16A-202ENST00000290037 ARHGAP25P42331 645 aa16.68■□□□□ 0.26
SEC16A-202ENST00000290037 A2ML1A8K2U0 1454 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
SEC16A-202ENST00000290037 PI4KAP2A4QPH2 592 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 H0YCG3 227 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 PI4KAP1Q8N8J0 262 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 MYL5Q02045 173 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 RRAGBQ5VZM2 374 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 KRT79Q5XKE5 535 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 UBE3BQ7Z3V4 1068 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 NME9Q86XW9 330 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 EXOC7Q9UPT5 735 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 SSX2IPQ9Y2D8 614 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 NEK11Q8NG66 645 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 VIMP08670 466 aaKnown RBP16.67■□□□□ 0.26
SEC16A-202ENST00000290037 RUFY4Q6ZNE9 571 aa16.67■□□□□ 0.26
SEC16A-202ENST00000290037 NCAPD2Q15021 1401 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms