RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 FAM84BQ96KN1 310 aaPredicted RBP8.06□□□□□ -1.12
CD44-204ENST00000279452 GNL3LQ9NVN8 582 aaKnown RBP8.06□□□□□ -1.12
CD44-204ENST00000279452 HDAC9Q9UKV0 1011 aa8.06□□□□□ -1.12
CD44-204ENST00000279452 ZNF609O15014 1411 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 IL1R1P14778 569 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 FGFR2P21802 821 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 ADORA1P30542 326 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 TIMM10P62072 90 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 IRX6P78412 446 aaPredicted RBP8.05□□□□□ -1.12
CD44-204ENST00000279452 HSP90AB4PQ58FF6 505 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 MFSD14BQ5SR56 506 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 DACT2Q5SW24 774 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 MAP1SQ66K74 1059 aaPredicted RBP8.05□□□□□ -1.12
CD44-204ENST00000279452 CHADLQ6NUI6 762 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 USP50Q70EL3 339 aaPredicted RBP8.05□□□□□ -1.12
CD44-204ENST00000279452 ERC1Q8IUD2 1116 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 AGBL3Q8NEM8 1001 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 TRPM4Q8TD43 1214 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 DPF2Q92785 391 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 XAGE2Q96GT9 111 aa8.05□□□□□ -1.12
CD44-204ENST00000279452 IRS2Q9Y4H2 1338 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 SASH1O94885 1247 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 PHKA1P46020 1223 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 C1QBPQ07021 282 aaKnown RBP8.04□□□□□ -1.12
CD44-204ENST00000279452 FSTL1Q12841 308 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 TNNI3KQ59H18 835 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 TTC39AQ5SRH9 613 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 CCDC102BQ68D86 513 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 FBXO33Q7Z6M2 555 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 TDRD7Q8NHU6 1098 aaKnown RBP8.04□□□□□ -1.12
CD44-204ENST00000279452 ZNF408Q9H9D4 720 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 IL1RAPL2Q9NP60 686 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 MYOZ2Q9NPC6 264 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 FPGT-TNNI3KV9GXZ4 949 aa8.04□□□□□ -1.12
CD44-204ENST00000279452 SCN4AP35499 1836 aa8.03□□□□□ -1.12
CD44-204ENST00000279452 EGFRP00533 1210 aa8.03□□□□□ -1.12
CD44-204ENST00000279452 CCDC158Q5M9N0 1113 aa8.03□□□□□ -1.12
CD44-204ENST00000279452 AACSQ86V21 672 aa8.03□□□□□ -1.12
CD44-204ENST00000279452 CNTROBQ8N137 903 aa8.03□□□□□ -1.12
CD44-204ENST00000279452 CERS5Q8N5B7 392 aa8.03□□□□□ -1.12
CD44-204ENST00000279452 DCPSQ96C86 337 aaKnown RBP8.03□□□□□ -1.12
CD44-204ENST00000279452 CCDC8Q9H0W5 538 aaPredicted RBP8.03□□□□□ -1.12
CD44-204ENST00000279452 GGA3Q9NZ52 723 aa8.03□□□□□ -1.12
CD44-204ENST00000279452 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
CD44-204ENST00000279452 TTF2Q9UNY4 1162 aaKnown RBP8.03□□□□□ -1.12
CD44-204ENST00000279452 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.03□□□□□ -1.12
CD44-204ENST00000279452 MYO1BO43795 1136 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 IFIT2P09913 472 aaKnown RBP8.02□□□□□ -1.13
CD44-204ENST00000279452 ZNF280AP59817 542 aaPredicted RBP8.02□□□□□ -1.13
CD44-204ENST00000279452 SCARF1Q14162 830 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 DLGAP5Q15398 846 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 ANGEL2Q5VTE6 544 aaKnown RBP8.02□□□□□ -1.13
CD44-204ENST00000279452 SULF1Q8IWU6 871 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 SIRT2Q8IXJ6 389 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 CLASRPQ8N2M8 674 aaKnown RBP8.02□□□□□ -1.13
CD44-204ENST00000279452 EXOC6Q8TAG9 804 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 WDR66Q8TBY9 1149 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 RHPN1Q8TCX5 695 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 TBC1D22AQ8WUA7 517 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 KIF1BPQ96EK5 621 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 DBNDD2Q9BQY9 259 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 TLR7Q9NYK1 1049 aaKnown RBP8.02□□□□□ -1.13
CD44-204ENST00000279452 ABCF2Q9UG63 623 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 DENND2AQ9ULE3 1009 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 NOP58Q9Y2X3 529 aaKnown RBP8.02□□□□□ -1.13
CD44-204ENST00000279452 SCN9AQ15858 1988 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 MAST3O60307 1309 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 FAM205AQ6ZU69 1335 aa8.02□□□□□ -1.13
CD44-204ENST00000279452 COL1A1P02452 1464 aaPredicted RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 CLRN2A0PK11 232 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 ADM5C9JUS6 153 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 TRAF5O00463 557 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 SEMA3EO15041 775 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 RAB11FIP3O75154 756 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 LDHBP07195 334 aaKnown RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 UQCRFS1P1P0C7P4 283 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 HSPA6P17066 643 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 HIRAP54198 1017 aaPredicted RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 FKBP1AP62942 108 aaKnown RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 RASGRF1Q13972 1273 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 NBPF9Q3BBW0 867 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 CFAP100Q494V2 611 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 PAXIP1Q6ZW49 1069 aaPredicted RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 KRT26Q7Z3Y9 468 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 USP48Q86UV5 1035 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 DZIP1Q86YF9 867 aaKnown RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 ZGPATQ8N5A5 531 aaKnown RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 GMLQ99445 158 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 GLIS2Q9BZE0 524 aaPredicted RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 LRRCC1Q9C099 1032 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 VEZTQ9HBM0 779 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 GPR108Q9NPR9 543 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 SNRKQ9NRH2 765 aa8.01□□□□□ -1.13
CD44-204ENST00000279452 SCAF8Q9UPN6 1271 aaKnown RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 ASTN2O75129 1339 aaPredicted RBP8.01□□□□□ -1.13
CD44-204ENST00000279452 ARAP2Q8WZ64 1704 aa8□□□□□ -1.13
CD44-204ENST00000279452 SMARCA5O60264 1052 aaPredicted RBP8□□□□□ -1.13
CD44-204ENST00000279452 CRKP46108 304 aa8□□□□□ -1.13
CD44-204ENST00000279452 HTRA3P83110 453 aa8□□□□□ -1.13
CD44-204ENST00000279452 GRIK5Q16478 980 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms